RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 TnxbO35452 4006 aa6.66□□□□□ -1.34
Col18a1-202ENSMUST00000081654 Sprr2kO70562 68 aa6.64□□□□□ -1.35
Col18a1-202ENSMUST00000081654 Dnah11E9Q7N9 4488 aa6.62□□□□□ -1.35
Col18a1-202ENSMUST00000081654 Lce1mQ9CR91 182 aa6.61□□□□□ -1.35
Col18a1-202ENSMUST00000081654 CubnQ9JLB4 3623 aa6.6□□□□□ -1.35
Col18a1-202ENSMUST00000081654 ApobE9Q414 4505 aa6.6□□□□□ -1.35
Col18a1-202ENSMUST00000081654 Dnah9B1AR51 4484 aa6.59□□□□□ -1.36
Col18a1-202ENSMUST00000081654 SacsQ9JLC8 4582 aa6.59□□□□□ -1.36
Col18a1-202ENSMUST00000081654 Dnah2P0C6F1 4456 aa6.59□□□□□ -1.36
Col18a1-202ENSMUST00000081654 PrkdcP97313 4128 aa6.59□□□□□ -1.36
Col18a1-202ENSMUST00000081654 Ryr1E9PZQ0 5035 aa6.53□□□□□ -1.36
Col18a1-202ENSMUST00000081654 BsnO88737 3942 aa6.52□□□□□ -1.37
Col18a1-202ENSMUST00000081654 Xirp2Q4U4S6 3784 aa6.48□□□□□ -1.37
Col18a1-202ENSMUST00000081654 Dnah1E9Q8T7 4250 aa6.48□□□□□ -1.37
Col18a1-202ENSMUST00000081654 Pkd1O08852 4293 aa6.47□□□□□ -1.37
Col18a1-202ENSMUST00000081654 Csmd3Q80T79 3707 aa6.45□□□□□ -1.38
Col18a1-202ENSMUST00000081654 Fat1A0A1L1SQU7 4645 aa6.45□□□□□ -1.38
Col18a1-202ENSMUST00000081654 Mycbp2Q7TPH6 4711 aa6.44□□□□□ -1.38
Col18a1-202ENSMUST00000081654 Dnah3Q8BW94 4083 aa6.44□□□□□ -1.38
Col18a1-202ENSMUST00000081654 Hspg2Q05793 3707 aaKnown RBP6.42□□□□□ -1.38
Col18a1-202ENSMUST00000081654 Lrp1bQ9JI18 4599 aa6.42□□□□□ -1.38
Col18a1-202ENSMUST00000081654 Krtap16-3Q8C1I6 86 aa6.39□□□□□ -1.39
Col18a1-202ENSMUST00000081654 Krtap19-3Q925H6 87 aa6.39□□□□□ -1.39
Col18a1-202ENSMUST00000081654 Dnah8Q91XQ0 4731 aa6.36□□□□□ -1.39
Col18a1-202ENSMUST00000081654 Prm1P02319 51 aa6.35□□□□□ -1.39
Col18a1-202ENSMUST00000081654 Dnah7bL7N1Y0 4068 aa6.33□□□□□ -1.4
Col18a1-202ENSMUST00000081654 Krtap9-5A2A5X3 358 aa6.31□□□□□ -1.4
Col18a1-202ENSMUST00000081654 Sprr2gO70558 76 aa6.3□□□□□ -1.4
Col18a1-202ENSMUST00000081654 Krtap19-1Q925H2 87 aa6.26□□□□□ -1.41
Col18a1-202ENSMUST00000081654 Fat3Q8BNA6 4555 aa6.22□□□□□ -1.41
Col18a1-202ENSMUST00000081654 Fras1Q80T14 4010 aa6.2□□□□□ -1.42
Col18a1-202ENSMUST00000081654 Hectd4E9Q2E4 4418 aa6.18□□□□□ -1.42
Col18a1-202ENSMUST00000081654 Ryr2E9Q401 4966 aaKnown RBP6.17□□□□□ -1.42
Col18a1-202ENSMUST00000081654 Dnah6E9Q0B6 4144 aa6.15□□□□□ -1.42
Col18a1-202ENSMUST00000081654 Dnhd1D3Z2X2 4750 aa6.14□□□□□ -1.43
Col18a1-202ENSMUST00000081654 Kmt2aP55200 3966 aa6.14□□□□□ -1.43
Col18a1-202ENSMUST00000081654 Ryr3A2AGL3 4863 aa6.12□□□□□ -1.43
Col18a1-202ENSMUST00000081654 Lce3bQ9CQM7 98 aa6.11□□□□□ -1.43
Col18a1-202ENSMUST00000081654 Herc2Q4U2R1 4836 aa6.07□□□□□ -1.44
Col18a1-202ENSMUST00000081654 Gm7735D3YX18 52 aa6.07□□□□□ -1.44
Col18a1-202ENSMUST00000081654 Kiaa1109A2AAE1 5005 aa6.02□□□□□ -1.45
Col18a1-202ENSMUST00000081654 Krtap22-2J3QNX6 67 aa5.99□□□□□ -1.45
Col18a1-202ENSMUST00000081654 Mt2P02798 61 aa5.99□□□□□ -1.45
Col18a1-202ENSMUST00000081654 Lce3cQ91V05 98 aa5.97□□□□□ -1.45
Col18a1-202ENSMUST00000081654 Gm10272F7CZ33 110 aa5.97□□□□□ -1.45
Col18a1-202ENSMUST00000081654 Dnah7aE9Q0T8 4024 aa5.94□□□□□ -1.46
Col18a1-202ENSMUST00000081654 Krtap19-2Q925I0 141 aa5.94□□□□□ -1.46
Col18a1-202ENSMUST00000081654 Krtap1-3A2A588 173 aa5.93□□□□□ -1.46
Col18a1-202ENSMUST00000081654 Gm9789Q8BIG3 52 aa5.93□□□□□ -1.46
Col18a1-202ENSMUST00000081654 Lrp1Q91ZX7 4545 aaKnown RBP5.93□□□□□ -1.46
Col18a1-202ENSMUST00000081654 HydinQ80W93 5154 aa5.92□□□□□ -1.46
Col18a1-202ENSMUST00000081654 Herc1E9PZP8 4859 aa5.91□□□□□ -1.46
Col18a1-202ENSMUST00000081654 2310046K23RikA0A0A6YVW6 87 aa5.91□□□□□ -1.46
Col18a1-202ENSMUST00000081654 Lrp2A2ARV4 4660 aa5.89□□□□□ -1.47
Col18a1-202ENSMUST00000081654 Gm10100J3QK64 120 aa5.88□□□□□ -1.47
Col18a1-202ENSMUST00000081654 Fat2Q5F226 4351 aa5.82□□□□□ -1.48
Col18a1-202ENSMUST00000081654 Dnah7cA0A087WR13 4024 aa5.81□□□□□ -1.48
Col18a1-202ENSMUST00000081654 Lce3eF8VQJ0 98 aa5.79□□□□□ -1.48
Col18a1-202ENSMUST00000081654 Lce3fQ6PAI4 98 aa5.79□□□□□ -1.48
Col18a1-202ENSMUST00000081654 Lce3dE9Q8V1 98 aa5.77□□□□□ -1.49
Col18a1-202ENSMUST00000081654 Gm38119A0A0A6YX29 146 aa5.76□□□□□ -1.49
Col18a1-202ENSMUST00000081654 Lce1jD3YUU5 139 aa5.76□□□□□ -1.49
Col18a1-202ENSMUST00000081654 Gm10142J3KMP7 120 aa5.72□□□□□ -1.49
Col18a1-202ENSMUST00000081654 Sprr2iO70560 76 aa5.72□□□□□ -1.49
Col18a1-202ENSMUST00000081654 Gm10061D3Z714 54 aa5.72□□□□□ -1.49
Col18a1-202ENSMUST00000081654 PcloQ9QYX7 5068 aa5.71□□□□□ -1.49
Col18a1-202ENSMUST00000081654 Birc6O88738 4882 aa5.63□□□□□ -1.51
Col18a1-202ENSMUST00000081654 Lce3aQ497I5 98 aa5.63□□□□□ -1.51
Col18a1-202ENSMUST00000081654 Kmt2cQ8BRH4 4903 aa5.6□□□□□ -1.51
Col18a1-202ENSMUST00000081654 Gm11569B1AQB1 180 aa5.59□□□□□ -1.51
Col18a1-202ENSMUST00000081654 Vps13bQ80TY5 3993 aa5.57□□□□□ -1.52
Col18a1-202ENSMUST00000081654 Lce1fB9EJP6 147 aa5.49□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1cQ9D1C5 147 aa5.49□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1lQ9D1G7 135 aa5.49□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1dQ9D731 133 aa5.49□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Pkhd1E9PZ36 4059 aa5.48□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1gQ9D195 139 aa5.46□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1iQ9D6P5 149 aa5.46□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1hQ9D6R3 140 aa5.46□□□□□ -1.53
Col18a1-202ENSMUST00000081654 Lce1bQ9D149 137 aa5.46□□□□□ -1.54
Col18a1-202ENSMUST00000081654 Pkhd1l1Q80ZA4 4249 aa5.38□□□□□ -1.55
Col18a1-202ENSMUST00000081654 Krtap9-3Q3V2C1 136 aa5.36□□□□□ -1.55
Col18a1-202ENSMUST00000081654 Lce1eQ9D139 143 aa5.36□□□□□ -1.55
Col18a1-202ENSMUST00000081654 Krtap19-4Q925H7 84 aa5.35□□□□□ -1.55
Col18a1-202ENSMUST00000081654 4932415D10RikA0A1W2P6U8 4986 aa5.32□□□□□ -1.56
Col18a1-202ENSMUST00000081654 Mdn1A2ANY6 5589 aaKnown RBP5.32□□□□□ -1.56
Col18a1-202ENSMUST00000081654 Krtap4-2B1AQ85 167 aa5.31□□□□□ -1.56
Col18a1-202ENSMUST00000081654 Gm10024A0A0A0MQA4 119 aa5.3□□□□□ -1.56
Col18a1-202ENSMUST00000081654 Sprr2eO70556 76 aa5.28□□□□□ -1.56
Col18a1-202ENSMUST00000081654 Mt4P47945 62 aa5.28□□□□□ -1.56
Col18a1-202ENSMUST00000081654 Sprr2fO70557 76 aa5.27□□□□□ -1.57
Col18a1-202ENSMUST00000081654 Krtap4-6Q3V4B7 195 aa5.23□□□□□ -1.57
Col18a1-202ENSMUST00000081654 Lce1a2Q9D1K4 149 aa5.21□□□□□ -1.57
Col18a1-202ENSMUST00000081654 Abca13Q5SSE9 5034 aa5.19□□□□□ -1.58
Col18a1-202ENSMUST00000081654 Fat4Q2PZL6 4981 aa5.17□□□□□ -1.58
Col18a1-202ENSMUST00000081654 Ubr4A2AN08 5180 aa5.17□□□□□ -1.58
Col18a1-202ENSMUST00000081654 ZanO88799 5376 aa5.12□□□□□ -1.59
Col18a1-202ENSMUST00000081654 Krtap4-1Q3UUY3 169 aa5.03□□□□□ -1.6
Col18a1-202ENSMUST00000081654 Gm11596B1AQB0 205 aa4.98□□□□□ -1.61
Col18a1-202ENSMUST00000081654 Muc5bE9Q5I3 4800 aa4.98□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 90.1 ms