RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Sprr4Q8CGN8 76 aa4.55□□□□□ -1.68
Upf3b-201ENSMUST00000076265 Krtap7-1Q9D3I6 87 aa4.55□□□□□ -1.68
Upf3b-201ENSMUST00000076265 Gm20537G3UYK7 97 aa4.55□□□□□ -1.68
Upf3b-201ENSMUST00000076265 Cox7bP56393 80 aa4.55□□□□□ -1.68
Upf3b-201ENSMUST00000076265 Abca13Q5SSE9 5034 aa4.54□□□□□ -1.68
Upf3b-201ENSMUST00000076265 Gm38119A0A0A6YX29 146 aa4.52□□□□□ -1.69
Upf3b-201ENSMUST00000076265 HydinQ80W93 5154 aa4.52□□□□□ -1.69
Upf3b-201ENSMUST00000076265 A730009L09RikA0A1B0GS82 72 aa4.51□□□□□ -1.69
Upf3b-201ENSMUST00000076265 Vps13bQ80TY5 3993 aa4.5□□□□□ -1.69
Upf3b-201ENSMUST00000076265 Prp2P05143 317 aa4.49□□□□□ -1.69
Upf3b-201ENSMUST00000076265 Lce1hQ9D6R3 140 aa4.49□□□□□ -1.69
Upf3b-201ENSMUST00000076265 1600014C23RikQ9DAX4 101 aa4.47□□□□□ -1.69
Upf3b-201ENSMUST00000076265 Sprr1bQ62267 153 aa4.46□□□□□ -1.69
Upf3b-201ENSMUST00000076265 Gm18596A0A1W2P860 280 aa4.46□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Krtap19-5O08632 62 aa4.46□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gm10642Q3TWM1 71 aa4.46□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gm10382Q3V0T5 144 aa4.44□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Dnhd1D3Z2X2 4750 aa4.44□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Lrp1Q91ZX7 4545 aaKnown RBP4.43□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gpr15lA0A0B4J1N3 78 aa4.43□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gm19668J3QMD1 248 aa4.43□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Fat3Q8BNA6 4555 aa4.43□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Lrp1bQ9JI18 4599 aa4.43□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gm10267M0QWD8 85 aa4.43□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Pkhd1l1Q80ZA4 4249 aa4.42□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gm5767A0A0J9YTU8 78 aa4.42□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Gm11562A0PK51 136 aa4.42□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Herc1E9PZP8 4859 aa4.41□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Mycbp2Q7TPH6 4711 aa4.41□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Sprr1aQ62266 144 aa4.41□□□□□ -1.7
Upf3b-201ENSMUST00000076265 Cox6b2Q80ZN9 88 aa4.4□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Gm28230A0A0A0MQ91 144 aa4.39□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Fat2Q5F226 4351 aa4.38□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Defb50Q6TU36 73 aa4.38□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Defb38Q7TNV7 63 aa4.37□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Krtap17-1A2A5X6 109 aa4.36□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Hectd4E9Q2E4 4418 aa4.35□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Rpl37Q9D823 97 aa4.34□□□□□ -1.71
Upf3b-201ENSMUST00000076265 Lrp2A2ARV4 4660 aa4.32□□□□□ -1.72
Upf3b-201ENSMUST00000076265 Lce1eQ9D139 143 aa4.32□□□□□ -1.72
Upf3b-201ENSMUST00000076265 Gm11627A6PWP4 55 aa4.31□□□□□ -1.72
Upf3b-201ENSMUST00000076265 Krtap1-4Q3V2D6 188 aa4.31□□□□□ -1.72
Upf3b-201ENSMUST00000076265 NbdyA0A0N4SUI7 68 aa4.3□□□□□ -1.72
Upf3b-201ENSMUST00000076265 Wfdc12Q9JHY3 85 aa4.26□□□□□ -1.73
Upf3b-201ENSMUST00000076265 D6Ertd527eA0A0N4SWI3 464 aa4.25□□□□□ -1.73
Upf3b-201ENSMUST00000076265 Lce1a1Q9CQH5 143 aa4.25□□□□□ -1.73
Upf3b-201ENSMUST00000076265 Lce1gQ9D195 139 aa4.25□□□□□ -1.73
Upf3b-201ENSMUST00000076265 Prm1P02319 51 aa4.23□□□□□ -1.73
Upf3b-201ENSMUST00000076265 HrnrQ8VHD8 2496 aa4.22□□□□□ -1.73
Upf3b-201ENSMUST00000076265 Gm7735D3YX18 52 aa4.21□□□□□ -1.74
Upf3b-201ENSMUST00000076265 Ush2AQ2QI47 5193 aa4.2□□□□□ -1.74
Upf3b-201ENSMUST00000076265 Gm9736A0A1W2P7N1 277 aa4.2□□□□□ -1.74
Upf3b-201ENSMUST00000076265 Gm9789Q8BIG3 52 aa4.17□□□□□ -1.74
Upf3b-201ENSMUST00000076265 Gm39115A0A1B0GSH7 232 aa4.15□□□□□ -1.74
Upf3b-201ENSMUST00000076265 Defb39Q70KL3 74 aa4.14□□□□□ -1.75
Upf3b-201ENSMUST00000076265 Ubr4A2AN08 5180 aa4.12□□□□□ -1.75
Upf3b-201ENSMUST00000076265 4932415D10RikA0A1W2P6U8 4986 aa4.11□□□□□ -1.75
Upf3b-201ENSMUST00000076265 Hmcn2A2AJ76 5100 aa4.09□□□□□ -1.75
Upf3b-201ENSMUST00000076265 Gm10139O88245 57 aa4.03□□□□□ -1.76
Upf3b-201ENSMUST00000076265 Gm11559Q9D3H7 191 aa4.03□□□□□ -1.76
Upf3b-201ENSMUST00000076265 Krtap4-9B1AQA9 244 aa3.99□□□□□ -1.77
Upf3b-201ENSMUST00000076265 Lce1lQ9D1G7 135 aa3.99□□□□□ -1.77
Upf3b-201ENSMUST00000076265 Gm9955Q8CEJ8 102 aa3.98□□□□□ -1.77
Upf3b-201ENSMUST00000076265 2310079G19RikQ9D6L6 185 aa3.98□□□□□ -1.77
Upf3b-201ENSMUST00000076265 Spaca4Q80ZQ0 127 aa3.96□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Defb1P56386 69 aa3.95□□□□□ -1.78
Upf3b-201ENSMUST00000076265 1700018G05RikA0A1B0GSI2 66 aa3.94□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Gm11569B1AQB1 180 aa3.94□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Gm11554B1AQB2 190 aa3.94□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Krtap19-3Q925H6 87 aa3.94□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Gm17606F6ZL36 78 aa3.92□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Rps29P62274 56 aa3.92□□□□□ -1.78
Upf3b-201ENSMUST00000076265 Gm29735A0A1B0GT06 219 aa3.88□□□□□ -1.79
Upf3b-201ENSMUST00000076265 4933428G20RikQ9D3X4 101 aa3.87□□□□□ -1.79
Upf3b-201ENSMUST00000076265 ZanO88799 5376 aa3.85□□□□□ -1.79
Upf3b-201ENSMUST00000076265 Gm16253D3Z167 63 aa3.83□□□□□ -1.8
Upf3b-201ENSMUST00000076265 Gm10999F6Q4M4 69 aa3.81□□□□□ -1.8
Upf3b-201ENSMUST00000076265 Fat4Q2PZL6 4981 aa3.81□□□□□ -1.8
Upf3b-201ENSMUST00000076265 Crct1Q6PAI5 102 aa3.8□□□□□ -1.8
Upf3b-201ENSMUST00000076265 Gm10318A0A1W2P728 225 aa3.76□□□□□ -1.81
Upf3b-201ENSMUST00000076265 Krtap13-1Q8K198 168 aa3.73□□□□□ -1.81
Upf3b-201ENSMUST00000076265 Sprr2a3Q4KL71 83 aa3.72□□□□□ -1.81
Upf3b-201ENSMUST00000076265 Sprr2a1Q9CQK8 83 aa3.72□□□□□ -1.81
Upf3b-201ENSMUST00000076265 Gm19426M0QWC7 77 aa3.71□□□□□ -1.82
Upf3b-201ENSMUST00000076265 Rnf213E9Q555 5152 aaKnown RBP3.71□□□□□ -1.82
Upf3b-201ENSMUST00000076265 Gm10061D3Z714 54 aa3.7□□□□□ -1.82
Upf3b-201ENSMUST00000076265 Krtap16-3Q8C1I6 86 aa3.7□□□□□ -1.82
Upf3b-201ENSMUST00000076265 Krtap19-1Q925H2 87 aa3.69□□□□□ -1.82
Upf3b-201ENSMUST00000076265 Gm2431E9Q8S1 172 aa3.65□□□□□ -1.83
Upf3b-201ENSMUST00000076265 2300003K06RikA2A4M0 262 aa3.61□□□□□ -1.83
Upf3b-201ENSMUST00000076265 Gm11567Q9D141 195 aa3.6□□□□□ -1.83
Upf3b-201ENSMUST00000076265 Gm10272F7CZ33 110 aa3.6□□□□□ -1.83
Upf3b-201ENSMUST00000076265 Krtap4-13Q9D7P3 165 aa3.6□□□□□ -1.83
Upf3b-201ENSMUST00000076265 Krtap9-1Q64526 186 aa3.58□□□□□ -1.84
Upf3b-201ENSMUST00000076265 SspoQ8CG65 4998 aa3.54□□□□□ -1.84
Upf3b-201ENSMUST00000076265 Gm11568A2A4M2 211 aa3.53□□□□□ -1.84
Upf3b-201ENSMUST00000076265 Gm45337A0A1B0GS71 263 aa3.51□□□□□ -1.85
Upf3b-201ENSMUST00000076265 Syne2Q6ZWQ0 6874 aaKnown RBP3.42□□□□□ -1.86
Upf3b-201ENSMUST00000076265 Krtap1-5A2A590 122 aa3.38□□□□□ -1.87
Upf3b-201ENSMUST00000076265 Gm11596B1AQB0 205 aa3.38□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 83.9 ms