RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Gm10382Q3V0T5 144 aa9.27□□□□□ -0.92
Trim58-201ENSMUST00000075084 1700042G07RikB1AUF7 90 aa9.26□□□□□ -0.93
Trim58-201ENSMUST00000075084 Gm20537G3UYK7 97 aa9.25□□□□□ -0.93
Trim58-201ENSMUST00000075084 Gm18596A0A1W2P860 280 aa9.24□□□□□ -0.93
Trim58-201ENSMUST00000075084 Krtap3-1A2A591 98 aa9.22□□□□□ -0.93
Trim58-201ENSMUST00000075084 2210017I01RikA0A0A6YVV1 95 aa9.19□□□□□ -0.94
Trim58-201ENSMUST00000075084 Ush2AQ2QI47 5193 aa9.18□□□□□ -0.94
Trim58-201ENSMUST00000075084 Gm9955Q8CEJ8 102 aa9.17□□□□□ -0.94
Trim58-201ENSMUST00000075084 Pla2g10Q9QXX3 151 aa9.12□□□□□ -0.95
Trim58-201ENSMUST00000075084 2310057N15RikQ9D6T8 200 aa9.1□□□□□ -0.95
Trim58-201ENSMUST00000075084 Hmcn2A2AJ76 5100 aa9.09□□□□□ -0.95
Trim58-201ENSMUST00000075084 Sec61bQ9CQS8 96 aaKnown RBP9.07□□□□□ -0.96
Trim58-201ENSMUST00000075084 Gm3880A0A1B0GSB3 72 aa9.06□□□□□ -0.96
Trim58-201ENSMUST00000075084 Krtap13-1Q8K198 168 aa9.02□□□□□ -0.97
Trim58-201ENSMUST00000075084 Ubr4A2AN08 5180 aa8.99□□□□□ -0.97
Trim58-201ENSMUST00000075084 Prm1P02319 51 aa8.95□□□□□ -0.98
Trim58-201ENSMUST00000075084 Gm9789Q8BIG3 52 aa8.95□□□□□ -0.98
Trim58-201ENSMUST00000075084 Gm7735D3YX18 52 aa8.89□□□□□ -0.99
Trim58-201ENSMUST00000075084 4932415D10RikA0A1W2P6U8 4986 aa8.86□□□□□ -0.99
Trim58-201ENSMUST00000075084 Crct1Q6PAI5 102 aa8.83□□□□□ -1
Trim58-201ENSMUST00000075084 Krtap1-5A2A590 122 aa8.83□□□□□ -1
Trim58-201ENSMUST00000075084 BC029722A0A0N4SW31 51 aa8.82□□□□□ -1
Trim58-201ENSMUST00000075084 Krtap16-3Q8C1I6 86 aa8.78□□□□□ -1
Trim58-201ENSMUST00000075084 ZanO88799 5376 aa8.75□□□□□ -1.01
Trim58-201ENSMUST00000075084 Krtap1-3A2A588 173 aa8.73□□□□□ -1.01
Trim58-201ENSMUST00000075084 Fam229aB2KGE5 128 aa8.73□□□□□ -1.01
Trim58-201ENSMUST00000075084 Krtap19-1Q925H2 87 aa8.71□□□□□ -1.01
Trim58-201ENSMUST00000075084 Gm10318A0A1W2P728 225 aa8.69□□□□□ -1.02
Trim58-201ENSMUST00000075084 Krtap19-3Q925H6 87 aa8.68□□□□□ -1.02
Trim58-201ENSMUST00000075084 Gm12216A0A1W2P827 62 aa8.66□□□□□ -1.02
Trim58-201ENSMUST00000075084 Romo1P60603 79 aa8.62□□□□□ -1.03
Trim58-201ENSMUST00000075084 B930094E09RikQ8C4T2 136 aa8.62□□□□□ -1.03
Trim58-201ENSMUST00000075084 Fat4Q2PZL6 4981 aa8.55□□□□□ -1.04
Trim58-201ENSMUST00000075084 CriptO70333 101 aa8.55□□□□□ -1.04
Trim58-201ENSMUST00000075084 Gm17402F6Z0L5 76 aa8.52□□□□□ -1.05
Trim58-201ENSMUST00000075084 Gm19426M0QWC7 77 aa8.52□□□□□ -1.05
Trim58-201ENSMUST00000075084 LorP18165 486 aa8.51□□□□□ -1.05
Trim58-201ENSMUST00000075084 Gm19402J3QJV4 266 aa8.49□□□□□ -1.05
Trim58-201ENSMUST00000075084 Rnf213E9Q555 5152 aaKnown RBP8.49□□□□□ -1.05
Trim58-201ENSMUST00000075084 Gm21887J3QQ04 176 aa8.45□□□□□ -1.06
Trim58-201ENSMUST00000075084 Spink7Q6IE32 76 aa8.39□□□□□ -1.07
Trim58-201ENSMUST00000075084 Sprr2a3Q4KL71 83 aa8.35□□□□□ -1.07
Trim58-201ENSMUST00000075084 Sprr2a1Q9CQK8 83 aa8.35□□□□□ -1.07
Trim58-201ENSMUST00000075084 Krtap1-4Q3V2D6 188 aa8.34□□□□□ -1.07
Trim58-201ENSMUST00000075084 SspoQ8CG65 4998 aa8.14□□□□□ -1.11
Trim58-201ENSMUST00000075084 Lce1jD3YUU5 139 aa8.04□□□□□ -1.12
Trim58-201ENSMUST00000075084 Gm10061D3Z714 54 aa7.99□□□□□ -1.13
Trim58-201ENSMUST00000075084 Krtap12-1Q9Z287 130 aa7.98□□□□□ -1.13
Trim58-201ENSMUST00000075084 Krtap7-1Q9D3I6 87 aa7.93□□□□□ -1.14
Trim58-201ENSMUST00000075084 Krtap19-9aF8WH65 55 aa7.92□□□□□ -1.14
Trim58-201ENSMUST00000075084 Camk2n1Q6QWF9 78 aa7.9□□□□□ -1.14
Trim58-201ENSMUST00000075084 Gm19668J3QMD1 248 aa7.87□□□□□ -1.15
Trim58-201ENSMUST00000075084 Mp68P56379 58 aa7.78□□□□□ -1.16
Trim58-201ENSMUST00000075084 Gm40193A0A1B0GT39 78 aa7.77□□□□□ -1.17
Trim58-201ENSMUST00000075084 Krtap17-1A2A5X6 109 aa7.76□□□□□ -1.17
Trim58-201ENSMUST00000075084 Prm2P07978 107 aa7.76□□□□□ -1.17
Trim58-201ENSMUST00000075084 Krtap19-2Q925I0 141 aa7.75□□□□□ -1.17
Trim58-201ENSMUST00000075084 Krtap9-5A2A5X3 358 aa7.71□□□□□ -1.17
Trim58-201ENSMUST00000075084 Gm11569B1AQB1 180 aa7.65□□□□□ -1.18
Trim58-201ENSMUST00000075084 Muc5bE9Q5I3 4800 aa7.57□□□□□ -1.2
Trim58-201ENSMUST00000075084 Lce1iQ9D6P5 149 aa7.54□□□□□ -1.2
Trim58-201ENSMUST00000075084 Gm20538F6Z9R1 75 aa7.53□□□□□ -1.2
Trim58-201ENSMUST00000075084 Lce1a2Q9D1K4 149 aa7.47□□□□□ -1.21
Trim58-201ENSMUST00000075084 Krtap8-1O08633 61 aa7.42□□□□□ -1.22
Trim58-201ENSMUST00000075084 Gm6358A0A087WPH4 74 aa7.35□□□□□ -1.23
Trim58-201ENSMUST00000075084 Krtap19-9bQ99NG9 58 aa7.32□□□□□ -1.24
Trim58-201ENSMUST00000075084 Tnp1P10856 55 aa7.31□□□□□ -1.24
Trim58-201ENSMUST00000075084 Mdn1A2ANY6 5589 aaKnown RBP7.28□□□□□ -1.24
Trim58-201ENSMUST00000075084 Ndufaf8A2AMZ4 74 aa7.22□□□□□ -1.25
Trim58-201ENSMUST00000075084 Krtap4-2B1AQ85 167 aa7.13□□□□□ -1.27
Trim58-201ENSMUST00000075084 Mt2P02798 61 aa7.13□□□□□ -1.27
Trim58-201ENSMUST00000075084 Lce1gQ9D195 139 aa7.11□□□□□ -1.27
Trim58-201ENSMUST00000075084 Gm11555B1AQ89 175 aa7.06□□□□□ -1.28
Trim58-201ENSMUST00000075084 Krtap9-3Q3V2C1 136 aa7.03□□□□□ -1.28
Trim58-201ENSMUST00000075084 Krtap4-6Q3V4B7 195 aa7□□□□□ -1.29
Trim58-201ENSMUST00000075084 Lce1hQ9D6R3 140 aa6.96□□□□□ -1.3
Trim58-201ENSMUST00000075084 Syne2Q6ZWQ0 6874 aaKnown RBP6.95□□□□□ -1.3
Trim58-201ENSMUST00000075084 2310046K23RikA0A0A6YVW6 87 aa6.95□□□□□ -1.3
Trim58-201ENSMUST00000075084 Gm11562A0PK51 136 aa6.93□□□□□ -1.3
Trim58-201ENSMUST00000075084 Gm11596B1AQB0 205 aa6.89□□□□□ -1.31
Trim58-201ENSMUST00000075084 Krtap4-1Q3UUY3 169 aa6.86□□□□□ -1.31
Trim58-201ENSMUST00000075084 Krtap22-2J3QNX6 67 aa6.74□□□□□ -1.33
Trim58-201ENSMUST00000075084 Gm11564A2A4L9 201 aa6.67□□□□□ -1.34
Trim58-201ENSMUST00000075084 Gm11563B1AQ90 168 aa6.67□□□□□ -1.34
Trim58-201ENSMUST00000075084 Gm11595B1AQA7 289 aa6.67□□□□□ -1.34
Trim58-201ENSMUST00000075084 Krtap4-8B1AQA8 209 aa6.67□□□□□ -1.34
Trim58-201ENSMUST00000075084 Krtap4-9B1AQA9 244 aa6.5□□□□□ -1.37
Trim58-201ENSMUST00000075084 Fsip2A2ARZ3 6995 aa6.5□□□□□ -1.37
Trim58-201ENSMUST00000075084 Mt4P47945 62 aa6.48□□□□□ -1.37
Trim58-201ENSMUST00000075084 Gm10272F7CZ33 110 aa6.4□□□□□ -1.39
Trim58-201ENSMUST00000075084 Lce1bQ9D149 137 aa6.34□□□□□ -1.39
Trim58-201ENSMUST00000075084 Gm9112A2AI92 75 aa6.32□□□□□ -1.4
Trim58-201ENSMUST00000075084 Lce1dQ9D731 133 aa6.31□□□□□ -1.4
Trim58-201ENSMUST00000075084 Gm38119A0A0A6YX29 146 aa6.26□□□□□ -1.41
Trim58-201ENSMUST00000075084 Krtap4-13Q9D7P3 165 aa6.26□□□□□ -1.41
Trim58-201ENSMUST00000075084 Sprr2gO70558 76 aa6.24□□□□□ -1.41
Trim58-201ENSMUST00000075084 Sprr2dO70555 85 aa6.16□□□□□ -1.42
Trim58-201ENSMUST00000075084 2300003K06RikA2A4M0 262 aa6.14□□□□□ -1.43
Trim58-201ENSMUST00000075084 Lce1eQ9D139 143 aa6.14□□□□□ -1.43
Trim58-201ENSMUST00000075084 Gm11938Q9D3H4 131 aa6.14□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 80.5 ms