RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Kiaa1109A2AAE1 5005 aa5.93□□□□□ -1.46
Trim23-203ENSMUST00000069187 Rnase13Q5GAM7 153 aa5.89□□□□□ -1.47
Trim23-203ENSMUST00000069187 Birc6O88738 4882 aa5.83□□□□□ -1.48
Trim23-203ENSMUST00000069187 Mycbp2Q7TPH6 4711 aa5.81□□□□□ -1.48
Trim23-203ENSMUST00000069187 Dnhd1D3Z2X2 4750 aa5.78□□□□□ -1.48
Trim23-203ENSMUST00000069187 HydinQ80W93 5154 aa5.75□□□□□ -1.49
Trim23-203ENSMUST00000069187 Ndufaf8A2AMZ4 74 aa5.73□□□□□ -1.49
Trim23-203ENSMUST00000069187 Sec61bQ9CQS8 96 aaKnown RBP5.73□□□□□ -1.49
Trim23-203ENSMUST00000069187 Krtap4-1Q3UUY3 169 aa5.72□□□□□ -1.49
Trim23-203ENSMUST00000069187 Gm21887J3QQ04 176 aa5.71□□□□□ -1.5
Trim23-203ENSMUST00000069187 Prm2P07978 107 aa5.7□□□□□ -1.5
Trim23-203ENSMUST00000069187 Krtap3-1A2A591 98 aa5.7□□□□□ -1.5
Trim23-203ENSMUST00000069187 Lrp2A2ARV4 4660 aa5.7□□□□□ -1.5
Trim23-203ENSMUST00000069187 Gm17416Q30KP4 66 aa5.69□□□□□ -1.5
Trim23-203ENSMUST00000069187 Gm19426M0QWC7 77 aa5.68□□□□□ -1.5
Trim23-203ENSMUST00000069187 Lce1mQ9CR91 182 aa5.68□□□□□ -1.5
Trim23-203ENSMUST00000069187 2310057N15RikQ9D6T8 200 aa5.68□□□□□ -1.5
Trim23-203ENSMUST00000069187 B930094E09RikQ8C4T2 136 aa5.63□□□□□ -1.51
Trim23-203ENSMUST00000069187 PcloQ9QYX7 5068 aa5.62□□□□□ -1.51
Trim23-203ENSMUST00000069187 Krtap7-1Q9D3I6 87 aa5.6□□□□□ -1.51
Trim23-203ENSMUST00000069187 Gm40193A0A1B0GT39 78 aa5.59□□□□□ -1.51
Trim23-203ENSMUST00000069187 2210017I01RikA0A0A6YVV1 95 aa5.58□□□□□ -1.52
Trim23-203ENSMUST00000069187 Fam229aB2KGE5 128 aa5.52□□□□□ -1.53
Trim23-203ENSMUST00000069187 Gm18596A0A1W2P860 280 aa5.51□□□□□ -1.53
Trim23-203ENSMUST00000069187 Gm17402F6Z0L5 76 aa5.51□□□□□ -1.53
Trim23-203ENSMUST00000069187 BC029722A0A0N4SW31 51 aa5.48□□□□□ -1.53
Trim23-203ENSMUST00000069187 Herc1E9PZP8 4859 aa5.47□□□□□ -1.53
Trim23-203ENSMUST00000069187 Crct1Q6PAI5 102 aa5.44□□□□□ -1.54
Trim23-203ENSMUST00000069187 Krtap13-1Q8K198 168 aa5.38□□□□□ -1.55
Trim23-203ENSMUST00000069187 Gm10318A0A1W2P728 225 aa5.37□□□□□ -1.55
Trim23-203ENSMUST00000069187 Gm11563B1AQ90 168 aa5.35□□□□□ -1.55
Trim23-203ENSMUST00000069187 Krtap4-7Q9D732 168 aa5.35□□□□□ -1.55
Trim23-203ENSMUST00000069187 Gm9112A2AI92 75 aa5.32□□□□□ -1.56
Trim23-203ENSMUST00000069187 Prm1P02319 51 aa5.3□□□□□ -1.56
Trim23-203ENSMUST00000069187 Gm19668J3QMD1 248 aa5.29□□□□□ -1.56
Trim23-203ENSMUST00000069187 Krtap16-3Q8C1I6 86 aa5.28□□□□□ -1.56
Trim23-203ENSMUST00000069187 Gm9789Q8BIG3 52 aa5.27□□□□□ -1.57
Trim23-203ENSMUST00000069187 Ush2AQ2QI47 5193 aa5.25□□□□□ -1.57
Trim23-203ENSMUST00000069187 Gm7735D3YX18 52 aa5.25□□□□□ -1.57
Trim23-203ENSMUST00000069187 Gm19402J3QJV4 266 aa5.25□□□□□ -1.57
Trim23-203ENSMUST00000069187 Gm11555B1AQ89 175 aa5.24□□□□□ -1.57
Trim23-203ENSMUST00000069187 Sprr2a3Q4KL71 83 aa5.24□□□□□ -1.57
Trim23-203ENSMUST00000069187 Sprr2a1Q9CQK8 83 aa5.24□□□□□ -1.57
Trim23-203ENSMUST00000069187 Krtap1-5A2A590 122 aa5.23□□□□□ -1.57
Trim23-203ENSMUST00000069187 Krtap19-1Q925H2 87 aa5.23□□□□□ -1.57
Trim23-203ENSMUST00000069187 Krtap19-3Q925H6 87 aa5.22□□□□□ -1.57
Trim23-203ENSMUST00000069187 A0A1Y7VJH8 109 aa5.2□□□□□ -1.58
Trim23-203ENSMUST00000069187 Spink7Q6IE32 76 aa5.18□□□□□ -1.58
Trim23-203ENSMUST00000069187 Krtap1-3A2A588 173 aa5.18□□□□□ -1.58
Trim23-203ENSMUST00000069187 Ubr4A2AN08 5180 aa5.16□□□□□ -1.58
Trim23-203ENSMUST00000069187 LorP18165 486 aa5.16□□□□□ -1.58
Trim23-203ENSMUST00000069187 Hmcn2A2AJ76 5100 aa5.16□□□□□ -1.58
Trim23-203ENSMUST00000069187 4932415D10RikA0A1W2P6U8 4986 aa5.09□□□□□ -1.59
Trim23-203ENSMUST00000069187 Camk2n1Q6QWF9 78 aa5.06□□□□□ -1.6
Trim23-203ENSMUST00000069187 ZanO88799 5376 aa5.05□□□□□ -1.6
Trim23-203ENSMUST00000069187 Krtap1-4Q3V2D6 188 aa4.98□□□□□ -1.61
Trim23-203ENSMUST00000069187 Krtap28-10A0A1Y7VP58 119 aa4.98□□□□□ -1.61
Trim23-203ENSMUST00000069187 Krtap4-2B1AQ85 167 aa4.94□□□□□ -1.62
Trim23-203ENSMUST00000069187 Tnp1P10856 55 aa4.93□□□□□ -1.62
Trim23-203ENSMUST00000069187 Fat4Q2PZL6 4981 aa4.92□□□□□ -1.62
Trim23-203ENSMUST00000069187 Krtap12-1Q9Z287 130 aa4.84□□□□□ -1.63
Trim23-203ENSMUST00000069187 Rnf213E9Q555 5152 aaKnown RBP4.83□□□□□ -1.64
Trim23-203ENSMUST00000069187 A0A1Y7VLE6 161 aa4.83□□□□□ -1.64
Trim23-203ENSMUST00000069187 Krtap19-9aF8WH65 55 aa4.81□□□□□ -1.64
Trim23-203ENSMUST00000069187 Lce1jD3YUU5 139 aa4.79□□□□□ -1.64
Trim23-203ENSMUST00000069187 Krtap28-13A0A087WQP5 138 aa4.78□□□□□ -1.64
Trim23-203ENSMUST00000069187 Gm10061D3Z714 54 aa4.75□□□□□ -1.65
Trim23-203ENSMUST00000069187 Krtap9-5A2A5X3 358 aa4.7□□□□□ -1.66
Trim23-203ENSMUST00000069187 2310046K23RikA0A0A6YVW6 87 aa4.69□□□□□ -1.66
Trim23-203ENSMUST00000069187 Krtap19-2Q925I0 141 aa4.68□□□□□ -1.66
Trim23-203ENSMUST00000069187 SspoQ8CG65 4998 aa4.64□□□□□ -1.67
Trim23-203ENSMUST00000069187 A030005K14RikA0A1Y7VNY1 122 aa4.63□□□□□ -1.67
Trim23-203ENSMUST00000069187 A030005L19RikA0A1Y7VIU2 113 aa4.61□□□□□ -1.67
Trim23-203ENSMUST00000069187 Krtap17-1A2A5X6 109 aa4.6□□□□□ -1.67
Trim23-203ENSMUST00000069187 Gm11569B1AQB1 180 aa4.55□□□□□ -1.68
Trim23-203ENSMUST00000069187 Krtap8-1O08633 61 aa4.55□□□□□ -1.68
Trim23-203ENSMUST00000069187 Lce1iQ9D6P5 149 aa4.47□□□□□ -1.69
Trim23-203ENSMUST00000069187 Krtap19-9bQ99NG9 58 aa4.44□□□□□ -1.7
Trim23-203ENSMUST00000069187 Gm7544A0A1Y7VJ58 118 aa4.43□□□□□ -1.7
Trim23-203ENSMUST00000069187 Gm6358A0A087WPH4 74 aa4.42□□□□□ -1.7
Trim23-203ENSMUST00000069187 Lce1a2Q9D1K4 149 aa4.42□□□□□ -1.7
Trim23-203ENSMUST00000069187 Muc5bE9Q5I3 4800 aa4.37□□□□□ -1.71
Trim23-203ENSMUST00000069187 Mt2P02798 61 aa4.36□□□□□ -1.71
Trim23-203ENSMUST00000069187 Mdn1A2ANY6 5589 aaKnown RBP4.27□□□□□ -1.73
Trim23-203ENSMUST00000069187 Krtap9-3Q3V2C1 136 aa4.24□□□□□ -1.73
Trim23-203ENSMUST00000069187 A0A1Y7VJ07 166 aa4.22□□□□□ -1.73
Trim23-203ENSMUST00000069187 4933428G20RikQ9D3X4 101 aa4.22□□□□□ -1.73
Trim23-203ENSMUST00000069187 Lce1gQ9D195 139 aa4.21□□□□□ -1.73
Trim23-203ENSMUST00000069187 Lce1hQ9D6R3 140 aa4.21□□□□□ -1.74
Trim23-203ENSMUST00000069187 Krtap4-6Q3V4B7 195 aa4.18□□□□□ -1.74
Trim23-203ENSMUST00000069187 Krtap22-2J3QNX6 67 aa4.15□□□□□ -1.74
Trim23-203ENSMUST00000069187 Sprr2gO70558 76 aa4.15□□□□□ -1.74
Trim23-203ENSMUST00000069187 Lce1dQ9D731 133 aa4.14□□□□□ -1.75
Trim23-203ENSMUST00000069187 Gm11596B1AQB0 205 aa4.08□□□□□ -1.76
Trim23-203ENSMUST00000069187 A030003K21RikA0A1Y7VIM3 128 aa4.07□□□□□ -1.76
Trim23-203ENSMUST00000069187 Sprr2dO70555 85 aa4.05□□□□□ -1.76
Trim23-203ENSMUST00000069187 Gm11938Q9D3H4 131 aa4.05□□□□□ -1.76
Trim23-203ENSMUST00000069187 Gm11562A0PK51 136 aa4□□□□□ -1.77
Trim23-203ENSMUST00000069187 A030014E15RikA0A1Y7VJV2 120 aa3.99□□□□□ -1.77
Trim23-203ENSMUST00000069187 Lce1eQ9D139 143 aa3.99□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms