RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Kiaa1109A2AAE1 5005 aa5.95□□□□□ -1.46
Vamp1-202ENSMUST00000063588 Krtap15-1Q9QZU5 150 aa5.95□□□□□ -1.46
Vamp1-202ENSMUST00000063588 Defb1P56386 69 aa5.94□□□□□ -1.46
Vamp1-202ENSMUST00000063588 Gm17416Q30KP4 66 aa5.9□□□□□ -1.47
Vamp1-202ENSMUST00000063588 Romo1P60603 79 aa5.88□□□□□ -1.47
Vamp1-202ENSMUST00000063588 Cox6b2Q80ZN9 88 aa5.88□□□□□ -1.47
Vamp1-202ENSMUST00000063588 PcloQ9QYX7 5068 aa5.84□□□□□ -1.47
Vamp1-202ENSMUST00000063588 Gm9955Q8CEJ8 102 aa5.8□□□□□ -1.48
Vamp1-202ENSMUST00000063588 HydinQ80W93 5154 aa5.78□□□□□ -1.48
Vamp1-202ENSMUST00000063588 Krtap4-2B1AQ85 167 aa5.76□□□□□ -1.49
Vamp1-202ENSMUST00000063588 Gm20537G3UYK7 97 aa5.74□□□□□ -1.49
Vamp1-202ENSMUST00000063588 Sec61bQ9CQS8 96 aaKnown RBP5.73□□□□□ -1.49
Vamp1-202ENSMUST00000063588 2210017I01RikA0A0A6YVV1 95 aa5.72□□□□□ -1.49
Vamp1-202ENSMUST00000063588 Gm17606F6ZL36 78 aa5.72□□□□□ -1.49
Vamp1-202ENSMUST00000063588 Herc1E9PZP8 4859 aa5.71□□□□□ -1.5
Vamp1-202ENSMUST00000063588 Gm3880A0A1B0GSB3 72 aa5.69□□□□□ -1.5
Vamp1-202ENSMUST00000063588 Lrp2A2ARV4 4660 aa5.69□□□□□ -1.5
Vamp1-202ENSMUST00000063588 Krtap3-1A2A591 98 aa5.66□□□□□ -1.5
Vamp1-202ENSMUST00000063588 Prm1P02319 51 aa5.62□□□□□ -1.51
Vamp1-202ENSMUST00000063588 Gm10382Q3V0T5 144 aa5.61□□□□□ -1.51
Vamp1-202ENSMUST00000063588 Krtap17-1A2A5X6 109 aa5.59□□□□□ -1.51
Vamp1-202ENSMUST00000063588 Gm7735D3YX18 52 aa5.58□□□□□ -1.52
Vamp1-202ENSMUST00000063588 Krtap13-1Q8K198 168 aa5.56□□□□□ -1.52
Vamp1-202ENSMUST00000063588 2310057N15RikQ9D6T8 200 aa5.56□□□□□ -1.52
Vamp1-202ENSMUST00000063588 Krtap1-5A2A590 122 aa5.5□□□□□ -1.53
Vamp1-202ENSMUST00000063588 Fam229aB2KGE5 128 aa5.49□□□□□ -1.53
Vamp1-202ENSMUST00000063588 Gm40193A0A1B0GT39 78 aa5.48□□□□□ -1.53
Vamp1-202ENSMUST00000063588 Gm9789Q8BIG3 52 aa5.47□□□□□ -1.53
Vamp1-202ENSMUST00000063588 BC029722A0A0N4SW31 51 aa5.46□□□□□ -1.54
Vamp1-202ENSMUST00000063588 Krtap16-3Q8C1I6 86 aa5.44□□□□□ -1.54
Vamp1-202ENSMUST00000063588 CriptO70333 101 aa5.43□□□□□ -1.54
Vamp1-202ENSMUST00000063588 Krtap19-1Q925H2 87 aa5.4□□□□□ -1.54
Vamp1-202ENSMUST00000063588 4932415D10RikA0A1W2P6U8 4986 aa5.4□□□□□ -1.54
Vamp1-202ENSMUST00000063588 Ush2AQ2QI47 5193 aa5.4□□□□□ -1.54
Vamp1-202ENSMUST00000063588 Krtap19-3Q925H6 87 aa5.36□□□□□ -1.55
Vamp1-202ENSMUST00000063588 Ndufaf8A2AMZ4 74 aa5.35□□□□□ -1.55
Vamp1-202ENSMUST00000063588 Gm17402F6Z0L5 76 aa5.33□□□□□ -1.56
Vamp1-202ENSMUST00000063588 Ubr4A2AN08 5180 aa5.31□□□□□ -1.56
Vamp1-202ENSMUST00000063588 Gm19426M0QWC7 77 aa5.3□□□□□ -1.56
Vamp1-202ENSMUST00000063588 Prm2P07978 107 aa5.29□□□□□ -1.56
Vamp1-202ENSMUST00000063588 Crct1Q6PAI5 102 aa5.29□□□□□ -1.56
Vamp1-202ENSMUST00000063588 Hmcn2A2AJ76 5100 aa5.28□□□□□ -1.56
Vamp1-202ENSMUST00000063588 Gm11562A0PK51 136 aa5.28□□□□□ -1.56
Vamp1-202ENSMUST00000063588 B930094E09RikQ8C4T2 136 aa5.27□□□□□ -1.57
Vamp1-202ENSMUST00000063588 Gm19402J3QJV4 266 aa5.26□□□□□ -1.57
Vamp1-202ENSMUST00000063588 Krtap1-3A2A588 173 aa5.24□□□□□ -1.57
Vamp1-202ENSMUST00000063588 Gm10318A0A1W2P728 225 aa5.22□□□□□ -1.57
Vamp1-202ENSMUST00000063588 Krtap1-4Q3V2D6 188 aa5.16□□□□□ -1.58
Vamp1-202ENSMUST00000063588 Sprr2a3Q4KL71 83 aa5.16□□□□□ -1.58
Vamp1-202ENSMUST00000063588 Sprr2a1Q9CQK8 83 aa5.16□□□□□ -1.58
Vamp1-202ENSMUST00000063588 Spink7Q6IE32 76 aa5.14□□□□□ -1.59
Vamp1-202ENSMUST00000063588 Krtap7-1Q9D3I6 87 aa5.14□□□□□ -1.59
Vamp1-202ENSMUST00000063588 ZanO88799 5376 aa5.13□□□□□ -1.59
Vamp1-202ENSMUST00000063588 Gm21887J3QQ04 176 aa5.11□□□□□ -1.59
Vamp1-202ENSMUST00000063588 Gm9112A2AI92 75 aa5.07□□□□□ -1.6
Vamp1-202ENSMUST00000063588 LorP18165 486 aa5.06□□□□□ -1.6
Vamp1-202ENSMUST00000063588 Rnf213E9Q555 5152 aaKnown RBP5.05□□□□□ -1.6
Vamp1-202ENSMUST00000063588 Fat4Q2PZL6 4981 aa4.98□□□□□ -1.61
Vamp1-202ENSMUST00000063588 A0A1Y7VJH8 109 aa4.97□□□□□ -1.61
Vamp1-202ENSMUST00000063588 Krtap12-1Q9Z287 130 aa4.97□□□□□ -1.61
Vamp1-202ENSMUST00000063588 Krtap19-9aF8WH65 55 aa4.94□□□□□ -1.62
Vamp1-202ENSMUST00000063588 Lce1jD3YUU5 139 aa4.92□□□□□ -1.62
Vamp1-202ENSMUST00000063588 Gm19668J3QMD1 248 aa4.86□□□□□ -1.63
Vamp1-202ENSMUST00000063588 Camk2n1Q6QWF9 78 aa4.84□□□□□ -1.63
Vamp1-202ENSMUST00000063588 SspoQ8CG65 4998 aa4.83□□□□□ -1.64
Vamp1-202ENSMUST00000063588 Gm10061D3Z714 54 aa4.82□□□□□ -1.64
Vamp1-202ENSMUST00000063588 Lce1gQ9D195 139 aa4.81□□□□□ -1.64
Vamp1-202ENSMUST00000063588 Gm11569B1AQB1 180 aa4.8□□□□□ -1.64
Vamp1-202ENSMUST00000063588 Krtap19-2Q925I0 141 aa4.76□□□□□ -1.65
Vamp1-202ENSMUST00000063588 Krtap28-10A0A1Y7VP58 119 aa4.74□□□□□ -1.65
Vamp1-202ENSMUST00000063588 Tnp1P10856 55 aa4.73□□□□□ -1.65
Vamp1-202ENSMUST00000063588 Syne2Q6ZWQ0 6874 aaKnown RBP4.72□□□□□ -1.65
Vamp1-202ENSMUST00000063588 Krtap9-5A2A5X3 358 aa4.72□□□□□ -1.65
Vamp1-202ENSMUST00000063588 Gm38119A0A0A6YX29 146 aa4.69□□□□□ -1.66
Vamp1-202ENSMUST00000063588 Lce1iQ9D6P5 149 aa4.63□□□□□ -1.67
Vamp1-202ENSMUST00000063588 A0A1Y7VLE6 161 aa4.63□□□□□ -1.67
Vamp1-202ENSMUST00000063588 Krtap8-1O08633 61 aa4.6□□□□□ -1.67
Vamp1-202ENSMUST00000063588 Gm11596B1AQB0 205 aa4.59□□□□□ -1.67
Vamp1-202ENSMUST00000063588 Krtap28-13A0A087WQP5 138 aa4.58□□□□□ -1.68
Vamp1-202ENSMUST00000063588 Lce1a2Q9D1K4 149 aa4.57□□□□□ -1.68
Vamp1-202ENSMUST00000063588 A030005K14RikA0A1Y7VNY1 122 aa4.55□□□□□ -1.68
Vamp1-202ENSMUST00000063588 Krtap19-9bQ99NG9 58 aa4.55□□□□□ -1.68
Vamp1-202ENSMUST00000063588 Muc5bE9Q5I3 4800 aa4.55□□□□□ -1.68
Vamp1-202ENSMUST00000063588 Gm6358A0A087WPH4 74 aa4.48□□□□□ -1.69
Vamp1-202ENSMUST00000063588 Krtap4-6Q3V4B7 195 aa4.45□□□□□ -1.7
Vamp1-202ENSMUST00000063588 2310046K23RikA0A0A6YVW6 87 aa4.44□□□□□ -1.7
Vamp1-202ENSMUST00000063588 Krtap31-2Q8CAY5 177 aa4.43□□□□□ -1.7
Vamp1-202ENSMUST00000063588 Mt2P02798 61 aa4.41□□□□□ -1.7
Vamp1-202ENSMUST00000063588 Lce1a1Q9CQH5 143 aa4.39□□□□□ -1.71
Vamp1-202ENSMUST00000063588 A030005L19RikA0A1Y7VIU2 113 aa4.38□□□□□ -1.71
Vamp1-202ENSMUST00000063588 Gm11564A2A4L9 201 aa4.29□□□□□ -1.72
Vamp1-202ENSMUST00000063588 Gm11595B1AQA7 289 aa4.29□□□□□ -1.72
Vamp1-202ENSMUST00000063588 Krtap4-8B1AQA8 209 aa4.29□□□□□ -1.72
Vamp1-202ENSMUST00000063588 Lce1hQ9D6R3 140 aa4.28□□□□□ -1.72
Vamp1-202ENSMUST00000063588 Mdn1A2ANY6 5589 aaKnown RBP4.24□□□□□ -1.73
Vamp1-202ENSMUST00000063588 Krtap9-3Q3V2C1 136 aa4.21□□□□□ -1.73
Vamp1-202ENSMUST00000063588 A030014E15RikA0A1Y7VJV2 120 aa4.21□□□□□ -1.74
Vamp1-202ENSMUST00000063588 A0A1Y7VJ07 166 aa4.2□□□□□ -1.74
Vamp1-202ENSMUST00000063588 Gm7544A0A1Y7VJ58 118 aa4.2□□□□□ -1.74
Vamp1-202ENSMUST00000063588 Krtap22-2J3QNX6 67 aa4.2□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms