RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Sprr2gO70558 76 aa4.45□□□□□ -1.7
Gtf3c1-201ENSMUST00000055506 Vps13bQ80TY5 3993 aa4.35□□□□□ -1.71
Gtf3c1-201ENSMUST00000055506 Dnah7bL7N1Y0 4068 aa4.32□□□□□ -1.72
Gtf3c1-201ENSMUST00000055506 Dnah6E9Q0B6 4144 aa4.3□□□□□ -1.72
Gtf3c1-201ENSMUST00000055506 Dnah5Q8VHE6 4621 aa4.29□□□□□ -1.72
Gtf3c1-201ENSMUST00000055506 Gm10100J3QK64 120 aa4.29□□□□□ -1.72
Gtf3c1-201ENSMUST00000055506 Dnah11E9Q7N9 4488 aa4.28□□□□□ -1.73
Gtf3c1-201ENSMUST00000055506 TnxbO35452 4006 aa4.26□□□□□ -1.73
Gtf3c1-201ENSMUST00000055506 Gm10272F7CZ33 110 aa4.24□□□□□ -1.73
Gtf3c1-201ENSMUST00000055506 Dnah2P0C6F1 4456 aa4.23□□□□□ -1.73
Gtf3c1-201ENSMUST00000055506 Lce3cQ91V05 98 aa4.23□□□□□ -1.73
Gtf3c1-201ENSMUST00000055506 PrkdcP97313 4128 aa4.21□□□□□ -1.74
Gtf3c1-201ENSMUST00000055506 Lce3bQ9CQM7 98 aa4.19□□□□□ -1.74
Gtf3c1-201ENSMUST00000055506 2310046K23RikA0A0A6YVW6 87 aa4.19□□□□□ -1.74
Gtf3c1-201ENSMUST00000055506 Kmt2aP55200 3966 aa4.18□□□□□ -1.74
Gtf3c1-201ENSMUST00000055506 Gm10142J3KMP7 120 aa4.15□□□□□ -1.74
Gtf3c1-201ENSMUST00000055506 Vps13dB1ART2 4390 aa4.15□□□□□ -1.74
Gtf3c1-201ENSMUST00000055506 PlecQ9QXS1 4691 aaKnown RBP4.13□□□□□ -1.75
Gtf3c1-201ENSMUST00000055506 ApobE9Q414 4505 aa4.12□□□□□ -1.75
Gtf3c1-201ENSMUST00000055506 Lce3eF8VQJ0 98 aa4.11□□□□□ -1.75
Gtf3c1-201ENSMUST00000055506 Lce3fQ6PAI4 98 aa4.11□□□□□ -1.75
Gtf3c1-201ENSMUST00000055506 Dync2h1Q45VK7 4306 aa4.11□□□□□ -1.75
Gtf3c1-201ENSMUST00000055506 Dnah3Q8BW94 4083 aa4.1□□□□□ -1.75
Gtf3c1-201ENSMUST00000055506 Dnah1E9Q8T7 4250 aa4.08□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Dnah17Q69Z23 4481 aa4.08□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Gm38119A0A0A6YX29 146 aa4.08□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Hectd4E9Q2E4 4418 aa4.08□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Stard9Q80TF6 4561 aa4.07□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Dnah9B1AR51 4484 aa4.06□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Krtap9-5A2A5X3 358 aa4.06□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Prm1P02319 51 aa4.06□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Lce1jD3YUU5 139 aa4.03□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Lce1gQ9D195 139 aa4.03□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Lce1iQ9D6P5 149 aa4.03□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Lce1hQ9D6R3 140 aa4.03□□□□□ -1.76
Gtf3c1-201ENSMUST00000055506 Lrp1Q91ZX7 4545 aaKnown RBP4.02□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 Mycbp2Q7TPH6 4711 aa4□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 Pkd1O08852 4293 aa4□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 Fat3Q8BNA6 4555 aa3.99□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 Lce3dE9Q8V1 98 aa3.98□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 SacsQ9JLC8 4582 aa3.98□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 Lce3aQ497I5 98 aa3.97□□□□□ -1.77
Gtf3c1-201ENSMUST00000055506 Gm7735D3YX18 52 aa3.95□□□□□ -1.78
Gtf3c1-201ENSMUST00000055506 Krtap16-3Q8C1I6 86 aa3.93□□□□□ -1.78
Gtf3c1-201ENSMUST00000055506 Krtap4-2B1AQ85 167 aa3.92□□□□□ -1.78
Gtf3c1-201ENSMUST00000055506 Dync1h1Q9JHU4 4644 aaKnown RBP3.91□□□□□ -1.78
Gtf3c1-201ENSMUST00000055506 Fras1Q80T14 4010 aa3.91□□□□□ -1.78
Gtf3c1-201ENSMUST00000055506 Fat1A0A1L1SQU7 4645 aa3.9□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Sprr2iO70560 76 aa3.89□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Krtap19-3Q925H6 87 aa3.88□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Dnah7cA0A087WR13 4024 aa3.88□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Lrp1bQ9JI18 4599 aa3.88□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Gm11569B1AQB1 180 aa3.86□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Gm10024A0A0A0MQA4 119 aa3.85□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Dnah7aE9Q0T8 4024 aa3.85□□□□□ -1.79
Gtf3c1-201ENSMUST00000055506 Gm9789Q8BIG3 52 aa3.83□□□□□ -1.8
Gtf3c1-201ENSMUST00000055506 Krtap22-2J3QNX6 67 aa3.82□□□□□ -1.8
Gtf3c1-201ENSMUST00000055506 Mt2P02798 61 aa3.82□□□□□ -1.8
Gtf3c1-201ENSMUST00000055506 Sprr2fO70557 76 aa3.79□□□□□ -1.8
Gtf3c1-201ENSMUST00000055506 Fat2Q5F226 4351 aa3.78□□□□□ -1.8
Gtf3c1-201ENSMUST00000055506 Krtap1-3A2A588 173 aa3.78□□□□□ -1.8
Gtf3c1-201ENSMUST00000055506 Ryr1E9PZQ0 5035 aa3.77□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Sprr2eO70556 76 aa3.75□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Mt4P47945 62 aa3.74□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Lce1bQ9D149 137 aa3.73□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Lce1fB9EJP6 147 aa3.73□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Lce1cQ9D1C5 147 aa3.73□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Lce1lQ9D1G7 135 aa3.73□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Lce1dQ9D731 133 aa3.73□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Lce1eQ9D139 143 aa3.72□□□□□ -1.81
Gtf3c1-201ENSMUST00000055506 Krtap19-1Q925H2 87 aa3.71□□□□□ -1.82
Gtf3c1-201ENSMUST00000055506 Gm10061D3Z714 54 aa3.71□□□□□ -1.82
Gtf3c1-201ENSMUST00000055506 Krtap4-6Q3V4B7 195 aa3.71□□□□□ -1.82
Gtf3c1-201ENSMUST00000055506 Krtap17-1A2A5X6 109 aa3.67□□□□□ -1.82
Gtf3c1-201ENSMUST00000055506 Krtap9-3Q3V2C1 136 aa3.65□□□□□ -1.82
Gtf3c1-201ENSMUST00000055506 Dnah8Q91XQ0 4731 aa3.64□□□□□ -1.83
Gtf3c1-201ENSMUST00000055506 Syne1Q6ZWR6 8799 aa3.63□□□□□ -1.83
Gtf3c1-201ENSMUST00000055506 Krtap19-2Q925I0 141 aa3.63□□□□□ -1.83
Gtf3c1-201ENSMUST00000055506 Gm11596B1AQB0 205 aa3.59□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Lrp2A2ARV4 4660 aa3.58□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Ryr3A2AGL3 4863 aa3.57□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Pkhd1E9PZ36 4059 aa3.55□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Kmt2cQ8BRH4 4903 aa3.54□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Dnhd1D3Z2X2 4750 aa3.54□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Krtap4-1Q3UUY3 169 aa3.54□□□□□ -1.84
Gtf3c1-201ENSMUST00000055506 Krtap31-1Q9D644 177 aa3.48□□□□□ -1.85
Gtf3c1-201ENSMUST00000055506 Krtap19-4Q925H7 84 aa3.48□□□□□ -1.85
Gtf3c1-201ENSMUST00000055506 Gm11564A2A4L9 201 aa3.47□□□□□ -1.85
Gtf3c1-201ENSMUST00000055506 Gm11563B1AQ90 168 aa3.47□□□□□ -1.85
Gtf3c1-201ENSMUST00000055506 Gm11595B1AQA7 289 aa3.47□□□□□ -1.85
Gtf3c1-201ENSMUST00000055506 Krtap4-8B1AQA8 209 aa3.47□□□□□ -1.85
Gtf3c1-201ENSMUST00000055506 Pkhd1l1Q80ZA4 4249 aa3.45□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 Herc2Q4U2R1 4836 aa3.45□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 Krtap4-16Q91W93 202 aa3.44□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 HydinQ80W93 5154 aa3.44□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 Krtap4-9B1AQA9 244 aa3.42□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 Ryr2E9Q401 4966 aaKnown RBP3.41□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 2300003K06RikA2A4M0 262 aa3.41□□□□□ -1.86
Gtf3c1-201ENSMUST00000055506 Krtap4-7Q9D732 168 aa3.38□□□□□ -1.87
Gtf3c1-201ENSMUST00000055506 Krtap4-13Q9D7P3 165 aa3.37□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 117.8 ms