RNA–Protein interactions for RNA: ENSMUST00000054990.10

Trim2-201, Transcript of Tripartite motif-containing protein 2, mousemouse

TSL 1 (best) BASIC

Gene Trim2, Length 3,816 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim2-201ENSMUST00000054990 Lrp1Q91ZX7 4545 aaKnown RBP4.69□□□□□ -1.66
Trim2-201ENSMUST00000054990 SacsQ9JLC8 4582 aa4.69□□□□□ -1.66
Trim2-201ENSMUST00000054990 Gm10318A0A1W2P728 225 aa4.69□□□□□ -1.66
Trim2-201ENSMUST00000054990 Ryr1E9PZQ0 5035 aa4.68□□□□□ -1.66
Trim2-201ENSMUST00000054990 Fat3Q8BNA6 4555 aa4.62□□□□□ -1.67
Trim2-201ENSMUST00000054990 Krtap19-5O08632 62 aa4.6□□□□□ -1.67
Trim2-201ENSMUST00000054990 Camk2n1Q6QWF9 78 aa4.6□□□□□ -1.67
Trim2-201ENSMUST00000054990 Fam229aB2KGE5 128 aa4.56□□□□□ -1.68
Trim2-201ENSMUST00000054990 Sec61bQ9CQS8 96 aaKnown RBP4.55□□□□□ -1.68
Trim2-201ENSMUST00000054990 B930094E09RikQ8C4T2 136 aa4.55□□□□□ -1.68
Trim2-201ENSMUST00000054990 Crct1Q6PAI5 102 aa4.53□□□□□ -1.68
Trim2-201ENSMUST00000054990 HydinQ80W93 5154 aa4.52□□□□□ -1.69
Trim2-201ENSMUST00000054990 Mycbp2Q7TPH6 4711 aa4.52□□□□□ -1.69
Trim2-201ENSMUST00000054990 Dnah8Q91XQ0 4731 aa4.49□□□□□ -1.69
Trim2-201ENSMUST00000054990 Dnhd1D3Z2X2 4750 aa4.48□□□□□ -1.69
Trim2-201ENSMUST00000054990 Krtap3-1A2A591 98 aa4.45□□□□□ -1.7
Trim2-201ENSMUST00000054990 2210017I01RikA0A0A6YVV1 95 aa4.44□□□□□ -1.7
Trim2-201ENSMUST00000054990 Gm17416Q30KP4 66 aa4.44□□□□□ -1.7
Trim2-201ENSMUST00000054990 Krtap13-1Q8K198 168 aa4.42□□□□□ -1.7
Trim2-201ENSMUST00000054990 Lrp2A2ARV4 4660 aa4.41□□□□□ -1.7
Trim2-201ENSMUST00000054990 Abca13Q5SSE9 5034 aa4.41□□□□□ -1.7
Trim2-201ENSMUST00000054990 Kiaa1109A2AAE1 5005 aa4.4□□□□□ -1.7
Trim2-201ENSMUST00000054990 Birc6O88738 4882 aa4.39□□□□□ -1.71
Trim2-201ENSMUST00000054990 Gm9112A2AI92 75 aa4.36□□□□□ -1.71
Trim2-201ENSMUST00000054990 Gm40193A0A1B0GT39 78 aa4.32□□□□□ -1.72
Trim2-201ENSMUST00000054990 Herc2Q4U2R1 4836 aa4.32□□□□□ -1.72
Trim2-201ENSMUST00000054990 Gm19402J3QJV4 266 aa4.27□□□□□ -1.73
Trim2-201ENSMUST00000054990 Gm17402F6Z0L5 76 aa4.26□□□□□ -1.73
Trim2-201ENSMUST00000054990 Gm19668J3QMD1 248 aa4.26□□□□□ -1.73
Trim2-201ENSMUST00000054990 Krtap7-1Q9D3I6 87 aa4.18□□□□□ -1.74
Trim2-201ENSMUST00000054990 PcloQ9QYX7 5068 aa4.16□□□□□ -1.74
Trim2-201ENSMUST00000054990 Tnp1P10856 55 aa4.15□□□□□ -1.75
Trim2-201ENSMUST00000054990 Krtap1-5A2A590 122 aa4.03□□□□□ -1.76
Trim2-201ENSMUST00000054990 Sprr2a3Q4KL71 83 aa4.02□□□□□ -1.77
Trim2-201ENSMUST00000054990 Sprr2a1Q9CQK8 83 aa4.02□□□□□ -1.77
Trim2-201ENSMUST00000054990 Herc1E9PZP8 4859 aa4□□□□□ -1.77
Trim2-201ENSMUST00000054990 Ubr4A2AN08 5180 aa3.99□□□□□ -1.77
Trim2-201ENSMUST00000054990 LorP18165 486 aa3.98□□□□□ -1.77
Trim2-201ENSMUST00000054990 Lce1mQ9CR91 182 aa3.98□□□□□ -1.77
Trim2-201ENSMUST00000054990 Krtap16-3Q8C1I6 86 aa3.95□□□□□ -1.78
Trim2-201ENSMUST00000054990 Krtap1-4Q3V2D6 188 aa3.92□□□□□ -1.78
Trim2-201ENSMUST00000054990 Hmcn2A2AJ76 5100 aa3.91□□□□□ -1.78
Trim2-201ENSMUST00000054990 Fat4Q2PZL6 4981 aa3.9□□□□□ -1.79
Trim2-201ENSMUST00000054990 Gm18596A0A1W2P860 280 aa3.89□□□□□ -1.79
Trim2-201ENSMUST00000054990 Krtap19-3Q925H6 87 aa3.88□□□□□ -1.79
Trim2-201ENSMUST00000054990 Krtap19-1Q925H2 87 aa3.84□□□□□ -1.79
Trim2-201ENSMUST00000054990 Ush2AQ2QI47 5193 aa3.83□□□□□ -1.8
Trim2-201ENSMUST00000054990 ZanO88799 5376 aa3.82□□□□□ -1.8
Trim2-201ENSMUST00000054990 Krtap19-9aF8WH65 55 aa3.77□□□□□ -1.81
Trim2-201ENSMUST00000054990 Krtap12-1Q9Z287 130 aa3.77□□□□□ -1.81
Trim2-201ENSMUST00000054990 A0A1Y7VJH8 109 aa3.76□□□□□ -1.81
Trim2-201ENSMUST00000054990 Lce1jD3YUU5 139 aa3.74□□□□□ -1.81
Trim2-201ENSMUST00000054990 Rnf213E9Q555 5152 aaKnown RBP3.73□□□□□ -1.81
Trim2-201ENSMUST00000054990 4932415D10RikA0A1W2P6U8 4986 aa3.71□□□□□ -1.82
Trim2-201ENSMUST00000054990 Prm1P02319 51 aa3.7□□□□□ -1.82
Trim2-201ENSMUST00000054990 Gm7735D3YX18 52 aa3.68□□□□□ -1.82
Trim2-201ENSMUST00000054990 Krtap1-3A2A588 173 aa3.67□□□□□ -1.82
Trim2-201ENSMUST00000054990 Gm9789Q8BIG3 52 aa3.67□□□□□ -1.82
Trim2-201ENSMUST00000054990 Krtap17-1A2A5X6 109 aa3.66□□□□□ -1.82
Trim2-201ENSMUST00000054990 Mdn1A2ANY6 5589 aaKnown RBP3.66□□□□□ -1.82
Trim2-201ENSMUST00000054990 Krtap28-10A0A1Y7VP58 119 aa3.64□□□□□ -1.83
Trim2-201ENSMUST00000054990 Krtap19-9bQ99NG9 58 aa3.6□□□□□ -1.83
Trim2-201ENSMUST00000054990 Gm6358A0A087WPH4 74 aa3.59□□□□□ -1.83
Trim2-201ENSMUST00000054990 Krtap9-5A2A5X3 358 aa3.59□□□□□ -1.83
Trim2-201ENSMUST00000054990 SspoQ8CG65 4998 aa3.58□□□□□ -1.84
Trim2-201ENSMUST00000054990 2310046K23RikA0A0A6YVW6 87 aa3.49□□□□□ -1.85
Trim2-201ENSMUST00000054990 A0A1Y7VLE6 161 aa3.49□□□□□ -1.85
Trim2-201ENSMUST00000054990 Krtap8-1O08633 61 aa3.48□□□□□ -1.85
Trim2-201ENSMUST00000054990 Krtap19-2Q925I0 141 aa3.48□□□□□ -1.85
Trim2-201ENSMUST00000054990 4933428G20RikQ9D3X4 101 aa3.48□□□□□ -1.85
Trim2-201ENSMUST00000054990 Syne1Q6ZWR6 8799 aa3.48□□□□□ -1.85
Trim2-201ENSMUST00000054990 Krtap28-13A0A087WQP5 138 aa3.46□□□□□ -1.86
Trim2-201ENSMUST00000054990 Lce1iQ9D6P5 149 aa3.44□□□□□ -1.86
Trim2-201ENSMUST00000054990 Krtap9-3Q3V2C1 136 aa3.43□□□□□ -1.86
Trim2-201ENSMUST00000054990 Lce1a2Q9D1K4 149 aa3.42□□□□□ -1.86
Trim2-201ENSMUST00000054990 A030005L19RikA0A1Y7VIU2 113 aa3.4□□□□□ -1.86
Trim2-201ENSMUST00000054990 Mt2P02798 61 aa3.38□□□□□ -1.87
Trim2-201ENSMUST00000054990 Gm10272F7CZ33 110 aa3.36□□□□□ -1.87
Trim2-201ENSMUST00000054990 Gm11562A0PK51 136 aa3.34□□□□□ -1.87
Trim2-201ENSMUST00000054990 Muc5bE9Q5I3 4800 aa3.34□□□□□ -1.87
Trim2-201ENSMUST00000054990 A030005K14RikA0A1Y7VNY1 122 aa3.34□□□□□ -1.87
Trim2-201ENSMUST00000054990 Lce1hQ9D6R3 140 aa3.34□□□□□ -1.87
Trim2-201ENSMUST00000054990 Muc16A0A140LJ72 8478 aa3.33□□□□□ -1.88
Trim2-201ENSMUST00000054990 Krtap31-1Q9D644 177 aa3.33□□□□□ -1.88
Trim2-201ENSMUST00000054990 Gm10061D3Z714 54 aa3.3□□□□□ -1.88
Trim2-201ENSMUST00000054990 Gm7544A0A1Y7VJ58 118 aa3.29□□□□□ -1.88
Trim2-201ENSMUST00000054990 Gm10100J3QK64 120 aa3.22□□□□□ -1.89
Trim2-201ENSMUST00000054990 Krtap22-2J3QNX6 67 aa3.2□□□□□ -1.9
Trim2-201ENSMUST00000054990 Gm11569B1AQB1 180 aa3.19□□□□□ -1.9
Trim2-201ENSMUST00000054990 Lce1dQ9D731 133 aa3.17□□□□□ -1.9
Trim2-201ENSMUST00000054990 Lce3bQ9CQM7 98 aa3.16□□□□□ -1.9
Trim2-201ENSMUST00000054990 Fsip2A2ARZ3 6995 aa3.16□□□□□ -1.9
Trim2-201ENSMUST00000054990 Krtap31-2Q8CAY5 177 aa3.15□□□□□ -1.91
Trim2-201ENSMUST00000054990 Gm10142J3KMP7 120 aa3.1□□□□□ -1.91
Trim2-201ENSMUST00000054990 Sprr2gO70558 76 aa3.07□□□□□ -1.92
Trim2-201ENSMUST00000054990 Lce3cQ91V05 98 aa3.06□□□□□ -1.92
Trim2-201ENSMUST00000054990 A0A1Y7VJ07 166 aa3.06□□□□□ -1.92
Trim2-201ENSMUST00000054990 A030003K21RikA0A1Y7VIM3 128 aa3.06□□□□□ -1.92
Trim2-201ENSMUST00000054990 Gm38119A0A0A6YX29 146 aa3.05□□□□□ -1.92
Trim2-201ENSMUST00000054990 Krtap4-2B1AQ85 167 aa3.03□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms