RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Sec61bQ9CQS8 96 aaKnown RBP4.63□□□□□ -1.67
Usp28-201ENSMUST00000047349 BC029722A0A0N4SW31 51 aa4.61□□□□□ -1.67
Usp28-201ENSMUST00000047349 Mycbp2Q7TPH6 4711 aa4.52□□□□□ -1.69
Usp28-201ENSMUST00000047349 Gm19426M0QWC7 77 aa4.52□□□□□ -1.69
Usp28-201ENSMUST00000047349 Krtap13-1Q8K198 168 aa4.52□□□□□ -1.69
Usp28-201ENSMUST00000047349 Dnhd1D3Z2X2 4750 aa4.51□□□□□ -1.69
Usp28-201ENSMUST00000047349 B930094E09RikQ8C4T2 136 aa4.51□□□□□ -1.69
Usp28-201ENSMUST00000047349 Abca13Q5SSE9 5034 aa4.5□□□□□ -1.69
Usp28-201ENSMUST00000047349 Gm17402F6Z0L5 76 aa4.5□□□□□ -1.69
Usp28-201ENSMUST00000047349 CriptO70333 101 aa4.5□□□□□ -1.69
Usp28-201ENSMUST00000047349 Fam229aB2KGE5 128 aa4.48□□□□□ -1.69
Usp28-201ENSMUST00000047349 2310057N15RikQ9D6T8 200 aa4.46□□□□□ -1.7
Usp28-201ENSMUST00000047349 Krtap1-5A2A590 122 aa4.44□□□□□ -1.7
Usp28-201ENSMUST00000047349 Kiaa1109A2AAE1 5005 aa4.4□□□□□ -1.71
Usp28-201ENSMUST00000047349 Birc6O88738 4882 aa4.39□□□□□ -1.71
Usp28-201ENSMUST00000047349 Herc2Q4U2R1 4836 aa4.38□□□□□ -1.71
Usp28-201ENSMUST00000047349 Gm20538F6Z9R1 75 aa4.38□□□□□ -1.71
Usp28-201ENSMUST00000047349 Mp68P56379 58 aa4.36□□□□□ -1.71
Usp28-201ENSMUST00000047349 Spink7Q6IE32 76 aa4.35□□□□□ -1.71
Usp28-201ENSMUST00000047349 Prm2P07978 107 aa4.31□□□□□ -1.72
Usp28-201ENSMUST00000047349 Sprr2a3Q4KL71 83 aa4.29□□□□□ -1.72
Usp28-201ENSMUST00000047349 Sprr2a1Q9CQK8 83 aa4.29□□□□□ -1.72
Usp28-201ENSMUST00000047349 Gm40193A0A1B0GT39 78 aa4.28□□□□□ -1.72
Usp28-201ENSMUST00000047349 Krtap16-3Q8C1I6 86 aa4.26□□□□□ -1.73
Usp28-201ENSMUST00000047349 Lrp2A2ARV4 4660 aa4.25□□□□□ -1.73
Usp28-201ENSMUST00000047349 HydinQ80W93 5154 aa4.23□□□□□ -1.73
Usp28-201ENSMUST00000047349 Krtap19-1Q925H2 87 aa4.22□□□□□ -1.73
Usp28-201ENSMUST00000047349 Gm19402J3QJV4 266 aa4.2□□□□□ -1.74
Usp28-201ENSMUST00000047349 Camk2n1Q6QWF9 78 aa4.19□□□□□ -1.74
Usp28-201ENSMUST00000047349 Crct1Q6PAI5 102 aa4.18□□□□□ -1.74
Usp28-201ENSMUST00000047349 Krtap19-3Q925H6 87 aa4.18□□□□□ -1.74
Usp28-201ENSMUST00000047349 Krtap7-1Q9D3I6 87 aa4.17□□□□□ -1.74
Usp28-201ENSMUST00000047349 Gm10318A0A1W2P728 225 aa4.16□□□□□ -1.74
Usp28-201ENSMUST00000047349 Krtap1-4Q3V2D6 188 aa4.15□□□□□ -1.74
Usp28-201ENSMUST00000047349 Lce1mQ9CR91 182 aa4.08□□□□□ -1.76
Usp28-201ENSMUST00000047349 Krtap17-1A2A5X6 109 aa4.07□□□□□ -1.76
Usp28-201ENSMUST00000047349 Gm19668J3QMD1 248 aa4.06□□□□□ -1.76
Usp28-201ENSMUST00000047349 PcloQ9QYX7 5068 aa4.02□□□□□ -1.77
Usp28-201ENSMUST00000047349 Ndufaf8A2AMZ4 74 aa4.02□□□□□ -1.77
Usp28-201ENSMUST00000047349 Herc1E9PZP8 4859 aa3.98□□□□□ -1.77
Usp28-201ENSMUST00000047349 Krtap19-9aF8WH65 55 aa3.98□□□□□ -1.77
Usp28-201ENSMUST00000047349 Krtap1-3A2A588 173 aa3.97□□□□□ -1.77
Usp28-201ENSMUST00000047349 Krtap12-1Q9Z287 130 aa3.96□□□□□ -1.78
Usp28-201ENSMUST00000047349 Tnp1P10856 55 aa3.94□□□□□ -1.78
Usp28-201ENSMUST00000047349 Gm9789Q8BIG3 52 aa3.9□□□□□ -1.78
Usp28-201ENSMUST00000047349 LorP18165 486 aa3.9□□□□□ -1.79
Usp28-201ENSMUST00000047349 Lce1jD3YUU5 139 aa3.89□□□□□ -1.79
Usp28-201ENSMUST00000047349 Prm1P02319 51 aa3.88□□□□□ -1.79
Usp28-201ENSMUST00000047349 Gm18596A0A1W2P860 280 aa3.86□□□□□ -1.79
Usp28-201ENSMUST00000047349 4932415D10RikA0A1W2P6U8 4986 aa3.83□□□□□ -1.8
Usp28-201ENSMUST00000047349 Ush2AQ2QI47 5193 aa3.83□□□□□ -1.8
Usp28-201ENSMUST00000047349 ZanO88799 5376 aa3.83□□□□□ -1.8
Usp28-201ENSMUST00000047349 Gm9112A2AI92 75 aa3.83□□□□□ -1.8
Usp28-201ENSMUST00000047349 Hmcn2A2AJ76 5100 aa3.82□□□□□ -1.8
Usp28-201ENSMUST00000047349 Gm7735D3YX18 52 aa3.82□□□□□ -1.8
Usp28-201ENSMUST00000047349 Krtap8-1O08633 61 aa3.79□□□□□ -1.8
Usp28-201ENSMUST00000047349 Rnf213E9Q555 5152 aaKnown RBP3.76□□□□□ -1.81
Usp28-201ENSMUST00000047349 Krtap19-9bQ99NG9 58 aa3.75□□□□□ -1.81
Usp28-201ENSMUST00000047349 Ubr4A2AN08 5180 aa3.73□□□□□ -1.81
Usp28-201ENSMUST00000047349 Krtap19-2Q925I0 141 aa3.71□□□□□ -1.82
Usp28-201ENSMUST00000047349 Krtap9-5A2A5X3 358 aa3.69□□□□□ -1.82
Usp28-201ENSMUST00000047349 Fat4Q2PZL6 4981 aa3.68□□□□□ -1.82
Usp28-201ENSMUST00000047349 2310046K23RikA0A0A6YVW6 87 aa3.66□□□□□ -1.82
Usp28-201ENSMUST00000047349 Lce1iQ9D6P5 149 aa3.66□□□□□ -1.82
Usp28-201ENSMUST00000047349 SspoQ8CG65 4998 aa3.62□□□□□ -1.83
Usp28-201ENSMUST00000047349 Lce1a2Q9D1K4 149 aa3.62□□□□□ -1.83
Usp28-201ENSMUST00000047349 Gm11562A0PK51 136 aa3.55□□□□□ -1.84
Usp28-201ENSMUST00000047349 Gm10061D3Z714 54 aa3.52□□□□□ -1.85
Usp28-201ENSMUST00000047349 Mt2P02798 61 aa3.49□□□□□ -1.85
Usp28-201ENSMUST00000047349 Gm6358A0A087WPH4 74 aa3.47□□□□□ -1.85
Usp28-201ENSMUST00000047349 Krtap9-3Q3V2C1 136 aa3.43□□□□□ -1.86
Usp28-201ENSMUST00000047349 Lce1hQ9D6R3 140 aa3.43□□□□□ -1.86
Usp28-201ENSMUST00000047349 Muc5bE9Q5I3 4800 aa3.41□□□□□ -1.86
Usp28-201ENSMUST00000047349 4933428G20RikQ9D3X4 101 aa3.32□□□□□ -1.88
Usp28-201ENSMUST00000047349 Krtap22-2J3QNX6 67 aa3.31□□□□□ -1.88
Usp28-201ENSMUST00000047349 Gm11569B1AQB1 180 aa3.27□□□□□ -1.89
Usp28-201ENSMUST00000047349 Sprr2gO70558 76 aa3.27□□□□□ -1.89
Usp28-201ENSMUST00000047349 Sprr2dO70555 85 aa3.21□□□□□ -1.9
Usp28-201ENSMUST00000047349 Gm10272F7CZ33 110 aa3.2□□□□□ -1.9
Usp28-201ENSMUST00000047349 Lce1dQ9D731 133 aa3.16□□□□□ -1.9
Usp28-201ENSMUST00000047349 Gm11938Q9D3H4 131 aa3.13□□□□□ -1.91
Usp28-201ENSMUST00000047349 Lce1eQ9D139 143 aa3.07□□□□□ -1.92
Usp28-201ENSMUST00000047349 Krtap31-1Q9D644 177 aa3.06□□□□□ -1.92
Usp28-201ENSMUST00000047349 Krtap19-4Q925H7 84 aa3.05□□□□□ -1.92
Usp28-201ENSMUST00000047349 Krtap31-2Q8CAY5 177 aa2.98□□□□□ -1.93
Usp28-201ENSMUST00000047349 Lce3bQ9CQM7 98 aa2.98□□□□□ -1.93
Usp28-201ENSMUST00000047349 Mdn1A2ANY6 5589 aaKnown RBP2.97□□□□□ -1.93
Usp28-201ENSMUST00000047349 Gm10100J3QK64 120 aa2.97□□□□□ -1.93
Usp28-201ENSMUST00000047349 Krtap4-2B1AQ85 167 aa2.95□□□□□ -1.94
Usp28-201ENSMUST00000047349 Krtap4-6Q3V4B7 195 aa2.95□□□□□ -1.94
Usp28-201ENSMUST00000047349 Lce1cQ9D1C5 147 aa2.94□□□□□ -1.94
Usp28-201ENSMUST00000047349 Gm10142J3KMP7 120 aa2.91□□□□□ -1.94
Usp28-201ENSMUST00000047349 Gm11555B1AQ89 175 aa2.9□□□□□ -1.94
Usp28-201ENSMUST00000047349 Krtap4-1Q3UUY3 169 aa2.89□□□□□ -1.95
Usp28-201ENSMUST00000047349 Lce1gQ9D195 139 aa2.88□□□□□ -1.95
Usp28-201ENSMUST00000047349 A0A1Y7VJH8 109 aa2.84□□□□□ -1.95
Usp28-201ENSMUST00000047349 Lce3cQ91V05 98 aa2.84□□□□□ -1.95
Usp28-201ENSMUST00000047349 Syne2Q6ZWQ0 6874 aaKnown RBP2.84□□□□□ -1.95
Usp28-201ENSMUST00000047349 A0A1Y7VLE6 161 aa2.83□□□□□ -1.96
Usp28-201ENSMUST00000047349 Lce3eF8VQJ0 98 aa2.83□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 66.8 ms