RNA–Protein interactions for RNA: ENSMUST00000037011.4

Trim36-201, Transcript of E3 ubiquitin-protein ligase Trim36, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim36, Length 4,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36-201ENSMUST00000037011 Fat2Q5F226 4351 aa4.5□□□□□ -1.69
Trim36-201ENSMUST00000037011 Krtap13-1Q8K198 168 aa4.5□□□□□ -1.69
Trim36-201ENSMUST00000037011 Lrp1Q91ZX7 4545 aaKnown RBP4.49□□□□□ -1.69
Trim36-201ENSMUST00000037011 Ryr1E9PZQ0 5035 aa4.48□□□□□ -1.69
Trim36-201ENSMUST00000037011 Fat3Q8BNA6 4555 aa4.45□□□□□ -1.7
Trim36-201ENSMUST00000037011 Gm17402F6Z0L5 76 aa4.43□□□□□ -1.7
Trim36-201ENSMUST00000037011 Gm21887J3QQ04 176 aa4.43□□□□□ -1.7
Trim36-201ENSMUST00000037011 Gm20538F6Z9R1 75 aa4.42□□□□□ -1.7
Trim36-201ENSMUST00000037011 Ryr2E9Q401 4966 aaKnown RBP4.41□□□□□ -1.7
Trim36-201ENSMUST00000037011 Mycbp2Q7TPH6 4711 aa4.4□□□□□ -1.7
Trim36-201ENSMUST00000037011 Dnah8Q91XQ0 4731 aa4.38□□□□□ -1.71
Trim36-201ENSMUST00000037011 Gm10318A0A1W2P728 225 aa4.36□□□□□ -1.71
Trim36-201ENSMUST00000037011 Crct1Q6PAI5 102 aa4.34□□□□□ -1.72
Trim36-201ENSMUST00000037011 Gm40193A0A1B0GT39 78 aa4.33□□□□□ -1.72
Trim36-201ENSMUST00000037011 Vps13bQ80TY5 3993 aa4.32□□□□□ -1.72
Trim36-201ENSMUST00000037011 Kiaa1109A2AAE1 5005 aa4.31□□□□□ -1.72
Trim36-201ENSMUST00000037011 Krtap1-5A2A590 122 aa4.3□□□□□ -1.72
Trim36-201ENSMUST00000037011 Herc2Q4U2R1 4836 aa4.29□□□□□ -1.72
Trim36-201ENSMUST00000037011 Pkhd1E9PZ36 4059 aa4.28□□□□□ -1.72
Trim36-201ENSMUST00000037011 Pkhd1l1Q80ZA4 4249 aa4.22□□□□□ -1.73
Trim36-201ENSMUST00000037011 Kmt2cQ8BRH4 4903 aa4.21□□□□□ -1.74
Trim36-201ENSMUST00000037011 Ndufaf8A2AMZ4 74 aa4.21□□□□□ -1.74
Trim36-201ENSMUST00000037011 Lrp2A2ARV4 4660 aa4.21□□□□□ -1.74
Trim36-201ENSMUST00000037011 Abca13Q5SSE9 5034 aa4.19□□□□□ -1.74
Trim36-201ENSMUST00000037011 A0A1Y7VJH8 109 aa4.17□□□□□ -1.74
Trim36-201ENSMUST00000037011 Sprr2a3Q4KL71 83 aa4.16□□□□□ -1.74
Trim36-201ENSMUST00000037011 Sprr2a1Q9CQK8 83 aa4.16□□□□□ -1.74
Trim36-201ENSMUST00000037011 HydinQ80W93 5154 aa4.16□□□□□ -1.74
Trim36-201ENSMUST00000037011 Tnp1P10856 55 aa4.16□□□□□ -1.74
Trim36-201ENSMUST00000037011 A030003K21RikA0A1Y7VIM3 128 aa4.14□□□□□ -1.75
Trim36-201ENSMUST00000037011 Gm19668J3QMD1 248 aa4.14□□□□□ -1.75
Trim36-201ENSMUST00000037011 Dnhd1D3Z2X2 4750 aa4.13□□□□□ -1.75
Trim36-201ENSMUST00000037011 Birc6O88738 4882 aa4.11□□□□□ -1.75
Trim36-201ENSMUST00000037011 Krtap1-4Q3V2D6 188 aa4.09□□□□□ -1.75
Trim36-201ENSMUST00000037011 Krtap16-3Q8C1I6 86 aa4.09□□□□□ -1.75
Trim36-201ENSMUST00000037011 Gm19402J3QJV4 266 aa4.09□□□□□ -1.75
Trim36-201ENSMUST00000037011 Krtap28-10A0A1Y7VP58 119 aa4.07□□□□□ -1.76
Trim36-201ENSMUST00000037011 Krtap19-3Q925H6 87 aa4.04□□□□□ -1.76
Trim36-201ENSMUST00000037011 Krtap19-1Q925H2 87 aa4.03□□□□□ -1.76
Trim36-201ENSMUST00000037011 Krtap7-1Q9D3I6 87 aa4.03□□□□□ -1.76
Trim36-201ENSMUST00000037011 Lce1mQ9CR91 182 aa4.02□□□□□ -1.77
Trim36-201ENSMUST00000037011 LorP18165 486 aa4□□□□□ -1.77
Trim36-201ENSMUST00000037011 Gm18596A0A1W2P860 280 aa3.98□□□□□ -1.77
Trim36-201ENSMUST00000037011 Krtap19-9aF8WH65 55 aa3.98□□□□□ -1.77
Trim36-201ENSMUST00000037011 Prm2P07978 107 aa3.94□□□□□ -1.78
Trim36-201ENSMUST00000037011 Krtap12-1Q9Z287 130 aa3.94□□□□□ -1.78
Trim36-201ENSMUST00000037011 Krtap28-13A0A087WQP5 138 aa3.93□□□□□ -1.78
Trim36-201ENSMUST00000037011 Gm9112A2AI92 75 aa3.87□□□□□ -1.79
Trim36-201ENSMUST00000037011 Gm6217A0A1Y7VJK9 128 aa3.87□□□□□ -1.79
Trim36-201ENSMUST00000037011 A030005K14RikA0A1Y7VNY1 122 aa3.83□□□□□ -1.8
Trim36-201ENSMUST00000037011 Krtap1-3A2A588 173 aa3.82□□□□□ -1.8
Trim36-201ENSMUST00000037011 Herc1E9PZP8 4859 aa3.82□□□□□ -1.8
Trim36-201ENSMUST00000037011 Prm1P02319 51 aa3.8□□□□□ -1.8
Trim36-201ENSMUST00000037011 A030005L19RikA0A1Y7VIU2 113 aa3.78□□□□□ -1.8
Trim36-201ENSMUST00000037011 PcloQ9QYX7 5068 aa3.78□□□□□ -1.8
Trim36-201ENSMUST00000037011 A0A1Y7VJ07 166 aa3.76□□□□□ -1.81
Trim36-201ENSMUST00000037011 Krtap19-9bQ99NG9 58 aa3.76□□□□□ -1.81
Trim36-201ENSMUST00000037011 Gm9789Q8BIG3 52 aa3.76□□□□□ -1.81
Trim36-201ENSMUST00000037011 Lce1jD3YUU5 139 aa3.74□□□□□ -1.81
Trim36-201ENSMUST00000037011 Gm7735D3YX18 52 aa3.74□□□□□ -1.81
Trim36-201ENSMUST00000037011 Gm7544A0A1Y7VJ58 118 aa3.73□□□□□ -1.81
Trim36-201ENSMUST00000037011 Krtap9-5A2A5X3 358 aa3.69□□□□□ -1.82
Trim36-201ENSMUST00000037011 Krtap8-1O08633 61 aa3.68□□□□□ -1.82
Trim36-201ENSMUST00000037011 4932415D10RikA0A1W2P6U8 4986 aa3.67□□□□□ -1.82
Trim36-201ENSMUST00000037011 Ubr4A2AN08 5180 aa3.66□□□□□ -1.82
Trim36-201ENSMUST00000037011 Ush2AQ2QI47 5193 aa3.65□□□□□ -1.82
Trim36-201ENSMUST00000037011 Krtap19-2Q925I0 141 aa3.64□□□□□ -1.83
Trim36-201ENSMUST00000037011 ZanO88799 5376 aa3.63□□□□□ -1.83
Trim36-201ENSMUST00000037011 Fat4Q2PZL6 4981 aa3.59□□□□□ -1.83
Trim36-201ENSMUST00000037011 Hmcn2A2AJ76 5100 aa3.56□□□□□ -1.84
Trim36-201ENSMUST00000037011 4933428G20RikQ9D3X4 101 aa3.52□□□□□ -1.85
Trim36-201ENSMUST00000037011 2310046K23RikA0A0A6YVW6 87 aa3.51□□□□□ -1.85
Trim36-201ENSMUST00000037011 Mt2P02798 61 aa3.5□□□□□ -1.85
Trim36-201ENSMUST00000037011 Lce1iQ9D6P5 149 aa3.48□□□□□ -1.85
Trim36-201ENSMUST00000037011 Gm10061D3Z714 54 aa3.48□□□□□ -1.85
Trim36-201ENSMUST00000037011 Lce1a2Q9D1K4 149 aa3.44□□□□□ -1.86
Trim36-201ENSMUST00000037011 Krtap17-1A2A5X6 109 aa3.44□□□□□ -1.86
Trim36-201ENSMUST00000037011 Rnf213E9Q555 5152 aaKnown RBP3.43□□□□□ -1.86
Trim36-201ENSMUST00000037011 A030014E15RikA0A1Y7VJV2 120 aa3.41□□□□□ -1.86
Trim36-201ENSMUST00000037011 Krtap4-1Q3UUY3 169 aa3.41□□□□□ -1.86
Trim36-201ENSMUST00000037011 Gm6358A0A087WPH4 74 aa3.4□□□□□ -1.87
Trim36-201ENSMUST00000037011 Krtap22-2J3QNX6 67 aa3.36□□□□□ -1.87
Trim36-201ENSMUST00000037011 SspoQ8CG65 4998 aa3.3□□□□□ -1.88
Trim36-201ENSMUST00000037011 Mdn1A2ANY6 5589 aaKnown RBP3.29□□□□□ -1.88
Trim36-201ENSMUST00000037011 Gm11569B1AQB1 180 aa3.29□□□□□ -1.88
Trim36-201ENSMUST00000037011 Gm10272F7CZ33 110 aa3.29□□□□□ -1.88
Trim36-201ENSMUST00000037011 Sprr2kO70562 68 aa3.27□□□□□ -1.89
Trim36-201ENSMUST00000037011 Krtap9-3Q3V2C1 136 aa3.26□□□□□ -1.89
Trim36-201ENSMUST00000037011 Lce1hQ9D6R3 140 aa3.25□□□□□ -1.89
Trim36-201ENSMUST00000037011 Muc5bE9Q5I3 4800 aa3.24□□□□□ -1.89
Trim36-201ENSMUST00000037011 Sprr2gO70558 76 aa3.14□□□□□ -1.91
Trim36-201ENSMUST00000037011 Gm11563B1AQ90 168 aa3.13□□□□□ -1.91
Trim36-201ENSMUST00000037011 Lce3bQ9CQM7 98 aa3.13□□□□□ -1.91
Trim36-201ENSMUST00000037011 Krtap4-7Q9D732 168 aa3.13□□□□□ -1.91
Trim36-201ENSMUST00000037011 Gm10100J3QK64 120 aa3.1□□□□□ -1.91
Trim36-201ENSMUST00000037011 Krtap4-2B1AQ85 167 aa3.07□□□□□ -1.92
Trim36-201ENSMUST00000037011 Lce3cQ91V05 98 aa3.04□□□□□ -1.92
Trim36-201ENSMUST00000037011 Krtap4-6Q3V4B7 195 aa3.03□□□□□ -1.92
Trim36-201ENSMUST00000037011 Gm11555B1AQ89 175 aa3.03□□□□□ -1.92
Trim36-201ENSMUST00000037011 Gm38119A0A0A6YX29 146 aa3.02□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 108.7 ms