RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Dnah10D3YYQ8 4591 aa4.44□□□□□ -1.7
Cspg4-201ENSMUST00000035661 Dnah11E9Q7N9 4488 aa4.43□□□□□ -1.7
Cspg4-201ENSMUST00000035661 Dnah5Q8VHE6 4621 aa4.41□□□□□ -1.7
Cspg4-201ENSMUST00000035661 Gm18596A0A1W2P860 280 aa4.39□□□□□ -1.71
Cspg4-201ENSMUST00000035661 Krtap8-1O08633 61 aa4.37□□□□□ -1.71
Cspg4-201ENSMUST00000035661 Krtap1-5A2A590 122 aa4.37□□□□□ -1.71
Cspg4-201ENSMUST00000035661 Pkd1O08852 4293 aa4.36□□□□□ -1.71
Cspg4-201ENSMUST00000035661 Hectd4E9Q2E4 4418 aa4.32□□□□□ -1.72
Cspg4-201ENSMUST00000035661 Dnah9B1AR51 4484 aa4.31□□□□□ -1.72
Cspg4-201ENSMUST00000035661 PlecQ9QXS1 4691 aaKnown RBP4.31□□□□□ -1.72
Cspg4-201ENSMUST00000035661 Gm19402J3QJV4 266 aa4.3□□□□□ -1.72
Cspg4-201ENSMUST00000035661 Vps13bQ80TY5 3993 aa4.29□□□□□ -1.72
Cspg4-201ENSMUST00000035661 ApobE9Q414 4505 aa4.28□□□□□ -1.72
Cspg4-201ENSMUST00000035661 Dnah2P0C6F1 4456 aa4.27□□□□□ -1.73
Cspg4-201ENSMUST00000035661 Krtap19-9aF8WH65 55 aa4.23□□□□□ -1.73
Cspg4-201ENSMUST00000035661 Krtap7-1Q9D3I6 87 aa4.23□□□□□ -1.73
Cspg4-201ENSMUST00000035661 Sprr2a3Q4KL71 83 aa4.22□□□□□ -1.73
Cspg4-201ENSMUST00000035661 Sprr2a1Q9CQK8 83 aa4.22□□□□□ -1.73
Cspg4-201ENSMUST00000035661 Stard9Q80TF6 4561 aa4.21□□□□□ -1.74
Cspg4-201ENSMUST00000035661 Krtap1-4Q3V2D6 188 aa4.15□□□□□ -1.74
Cspg4-201ENSMUST00000035661 2310046K23RikA0A0A6YVW6 87 aa4.12□□□□□ -1.75
Cspg4-201ENSMUST00000035661 Dync1h1Q9JHU4 4644 aaKnown RBP4.1□□□□□ -1.75
Cspg4-201ENSMUST00000035661 Lrp1bQ9JI18 4599 aa4.1□□□□□ -1.75
Cspg4-201ENSMUST00000035661 Lce1mQ9CR91 182 aa4.07□□□□□ -1.76
Cspg4-201ENSMUST00000035661 Krtap19-9bQ99NG9 58 aa4.06□□□□□ -1.76
Cspg4-201ENSMUST00000035661 Pkhd1E9PZ36 4059 aa4.05□□□□□ -1.76
Cspg4-201ENSMUST00000035661 LorP18165 486 aa4.05□□□□□ -1.76
Cspg4-201ENSMUST00000035661 Krtap12-1Q9Z287 130 aa4.03□□□□□ -1.77
Cspg4-201ENSMUST00000035661 Ryr1E9PZQ0 5035 aa4.02□□□□□ -1.77
Cspg4-201ENSMUST00000035661 Mycbp2Q7TPH6 4711 aa4□□□□□ -1.77
Cspg4-201ENSMUST00000035661 SacsQ9JLC8 4582 aa3.99□□□□□ -1.77
Cspg4-201ENSMUST00000035661 Pkhd1l1Q80ZA4 4249 aa3.97□□□□□ -1.77
Cspg4-201ENSMUST00000035661 Fat1A0A1L1SQU7 4645 aa3.97□□□□□ -1.77
Cspg4-201ENSMUST00000035661 Fat2Q5F226 4351 aa3.96□□□□□ -1.78
Cspg4-201ENSMUST00000035661 Prm1P02319 51 aa3.94□□□□□ -1.78
Cspg4-201ENSMUST00000035661 Sprr2fO70557 76 aa3.92□□□□□ -1.78
Cspg4-201ENSMUST00000035661 Lce3bQ9CQM7 98 aa3.91□□□□□ -1.78
Cspg4-201ENSMUST00000035661 Krtap16-3Q8C1I6 86 aa3.89□□□□□ -1.79
Cspg4-201ENSMUST00000035661 Krtap19-3Q925H6 87 aa3.87□□□□□ -1.79
Cspg4-201ENSMUST00000035661 Lrp1Q91ZX7 4545 aaKnown RBP3.87□□□□□ -1.79
Cspg4-201ENSMUST00000035661 Lce3cQ91V05 98 aa3.85□□□□□ -1.79
Cspg4-201ENSMUST00000035661 Sprr2iO70560 76 aa3.84□□□□□ -1.79
Cspg4-201ENSMUST00000035661 Dnah8Q91XQ0 4731 aa3.82□□□□□ -1.8
Cspg4-201ENSMUST00000035661 Fat3Q8BNA6 4555 aa3.82□□□□□ -1.8
Cspg4-201ENSMUST00000035661 Krtap19-1Q925H2 87 aa3.81□□□□□ -1.8
Cspg4-201ENSMUST00000035661 Gm7735D3YX18 52 aa3.76□□□□□ -1.81
Cspg4-201ENSMUST00000035661 Ryr3A2AGL3 4863 aa3.75□□□□□ -1.81
Cspg4-201ENSMUST00000035661 Gm10100J3QK64 120 aa3.74□□□□□ -1.81
Cspg4-201ENSMUST00000035661 Gm9789Q8BIG3 52 aa3.74□□□□□ -1.81
Cspg4-201ENSMUST00000035661 Gm38119A0A0A6YX29 146 aa3.73□□□□□ -1.81
Cspg4-201ENSMUST00000035661 Ryr2E9Q401 4966 aaKnown RBP3.73□□□□□ -1.81
Cspg4-201ENSMUST00000035661 Krtap9-5A2A5X3 358 aa3.71□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce3dE9Q8V1 98 aa3.69□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce3eF8VQJ0 98 aa3.69□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce3fQ6PAI4 98 aa3.69□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce1jD3YUU5 139 aa3.67□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce1gQ9D195 139 aa3.67□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce1iQ9D6P5 149 aa3.67□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lce1hQ9D6R3 140 aa3.67□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Gm10272F7CZ33 110 aa3.66□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Gm10142J3KMP7 120 aa3.66□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Lrp2A2ARV4 4660 aa3.65□□□□□ -1.82
Cspg4-201ENSMUST00000035661 Krtap1-3A2A588 173 aa3.65□□□□□ -1.83
Cspg4-201ENSMUST00000035661 Herc2Q4U2R1 4836 aa3.61□□□□□ -1.83
Cspg4-201ENSMUST00000035661 Sprr2eO70556 76 aa3.59□□□□□ -1.83
Cspg4-201ENSMUST00000035661 Lce3aQ497I5 98 aa3.59□□□□□ -1.84
Cspg4-201ENSMUST00000035661 Krtap31-2Q8CAY5 177 aa3.58□□□□□ -1.84
Cspg4-201ENSMUST00000035661 Krtap19-2Q925I0 141 aa3.56□□□□□ -1.84
Cspg4-201ENSMUST00000035661 Mt2P02798 61 aa3.56□□□□□ -1.84
Cspg4-201ENSMUST00000035661 Dnhd1D3Z2X2 4750 aa3.53□□□□□ -1.84
Cspg4-201ENSMUST00000035661 Krtap22-2J3QNX6 67 aa3.52□□□□□ -1.85
Cspg4-201ENSMUST00000035661 Gm10024A0A0A0MQA4 119 aa3.5□□□□□ -1.85
Cspg4-201ENSMUST00000035661 Lce1bQ9D149 137 aa3.49□□□□□ -1.85
Cspg4-201ENSMUST00000035661 Gm10061D3Z714 54 aa3.48□□□□□ -1.85
Cspg4-201ENSMUST00000035661 Kiaa1109A2AAE1 5005 aa3.48□□□□□ -1.85
Cspg4-201ENSMUST00000035661 Kmt2cQ8BRH4 4903 aa3.47□□□□□ -1.85
Cspg4-201ENSMUST00000035661 Lce1fB9EJP6 147 aa3.44□□□□□ -1.86
Cspg4-201ENSMUST00000035661 Lce1cQ9D1C5 147 aa3.44□□□□□ -1.86
Cspg4-201ENSMUST00000035661 Lce1lQ9D1G7 135 aa3.44□□□□□ -1.86
Cspg4-201ENSMUST00000035661 Lce1dQ9D731 133 aa3.44□□□□□ -1.86
Cspg4-201ENSMUST00000035661 Krtap31-1Q9D644 177 aa3.4□□□□□ -1.86
Cspg4-201ENSMUST00000035661 ZanO88799 5376 aa3.38□□□□□ -1.87
Cspg4-201ENSMUST00000035661 Gm11569B1AQB1 180 aa3.38□□□□□ -1.87
Cspg4-201ENSMUST00000035661 Lce1eQ9D139 143 aa3.37□□□□□ -1.87
Cspg4-201ENSMUST00000035661 PcloQ9QYX7 5068 aa3.33□□□□□ -1.88
Cspg4-201ENSMUST00000035661 Birc6O88738 4882 aa3.32□□□□□ -1.88
Cspg4-201ENSMUST00000035661 Abca13Q5SSE9 5034 aa3.3□□□□□ -1.88
Cspg4-201ENSMUST00000035661 Sprr2hO70559 108 aa3.3□□□□□ -1.88
Cspg4-201ENSMUST00000035661 Herc1E9PZP8 4859 aa3.28□□□□□ -1.88
Cspg4-201ENSMUST00000035661 Krtap19-4Q925H7 84 aa3.28□□□□□ -1.88
Cspg4-201ENSMUST00000035661 Krtap9-3Q3V2C1 136 aa3.27□□□□□ -1.89
Cspg4-201ENSMUST00000035661 Mt4P47945 62 aa3.23□□□□□ -1.89
Cspg4-201ENSMUST00000035661 Sprr2dO70555 85 aa3.22□□□□□ -1.89
Cspg4-201ENSMUST00000035661 Krtap4-2B1AQ85 167 aa3.21□□□□□ -1.89
Cspg4-201ENSMUST00000035661 HydinQ80W93 5154 aa3.17□□□□□ -1.9
Cspg4-201ENSMUST00000035661 Lce1a2Q9D1K4 149 aa3.14□□□□□ -1.91
Cspg4-201ENSMUST00000035661 Krtap4-6Q3V4B7 195 aa3.1□□□□□ -1.91
Cspg4-201ENSMUST00000035661 Sprr2bO70554 98 aa3.02□□□□□ -1.93
Cspg4-201ENSMUST00000035661 4932415D10RikA0A1W2P6U8 4986 aa3.02□□□□□ -1.93
Cspg4-201ENSMUST00000035661 Gm11596B1AQB0 205 aa3□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 142.5 ms