RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 PlecQ9QXS1 4691 aaKnown RBP3.17□□□□□ -1.9
Usp54-202ENSMUST00000035340 Xirp2Q4U4S6 3784 aa3.15□□□□□ -1.91
Usp54-202ENSMUST00000035340 Prm1P02319 51 aa3.13□□□□□ -1.91
Usp54-202ENSMUST00000035340 Muc6Q80T03 2850 aa3.13□□□□□ -1.91
Usp54-202ENSMUST00000035340 Dnah6E9Q0B6 4144 aa3.13□□□□□ -1.91
Usp54-202ENSMUST00000035340 PrkdcP97313 4128 aa3.08□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dync1h1Q9JHU4 4644 aaKnown RBP3.07□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah2P0C6F1 4456 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah17Q69Z23 4481 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah10D3YYQ8 4591 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Ryr1E9PZQ0 5035 aa3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Hspg2Q05793 3707 aaKnown RBP3.06□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dnah8Q91XQ0 4731 aa3.05□□□□□ -1.92
Usp54-202ENSMUST00000035340 Herc1E9PZP8 4859 aa3.05□□□□□ -1.92
Usp54-202ENSMUST00000035340 Dync2h1Q45VK7 4306 aa3.01□□□□□ -1.93
Usp54-202ENSMUST00000035340 Pkd1O08852 4293 aa3□□□□□ -1.93
Usp54-202ENSMUST00000035340 Lce3bQ9CQM7 98 aa2.99□□□□□ -1.93
Usp54-202ENSMUST00000035340 Dnhd1D3Z2X2 4750 aa2.99□□□□□ -1.93
Usp54-202ENSMUST00000035340 Dnah1E9Q8T7 4250 aa2.97□□□□□ -1.93
Usp54-202ENSMUST00000035340 Krtap9-5A2A5X3 358 aa2.96□□□□□ -1.94
Usp54-202ENSMUST00000035340 Dnah3Q8BW94 4083 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Krtap19-3Q925H6 87 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Kmt2aP55200 3966 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Fat1A0A1L1SQU7 4645 aa2.95□□□□□ -1.94
Usp54-202ENSMUST00000035340 Lrp1bQ9JI18 4599 aa2.94□□□□□ -1.94
Usp54-202ENSMUST00000035340 Hectd4E9Q2E4 4418 aa2.93□□□□□ -1.94
Usp54-202ENSMUST00000035340 Gm7735D3YX18 52 aa2.92□□□□□ -1.94
Usp54-202ENSMUST00000035340 Krtap16-3Q8C1I6 86 aa2.92□□□□□ -1.94
Usp54-202ENSMUST00000035340 SacsQ9JLC8 4582 aa2.92□□□□□ -1.94
Usp54-202ENSMUST00000035340 Dnah11E9Q7N9 4488 aa2.91□□□□□ -1.94
Usp54-202ENSMUST00000035340 2310046K23RikA0A0A6YVW6 87 aa2.91□□□□□ -1.94
Usp54-202ENSMUST00000035340 Krtap22-2J3QNX6 67 aa2.89□□□□□ -1.95
Usp54-202ENSMUST00000035340 Lce3cQ91V05 98 aa2.89□□□□□ -1.95
Usp54-202ENSMUST00000035340 Krtap19-1Q925H2 87 aa2.88□□□□□ -1.95
Usp54-202ENSMUST00000035340 Dnah7bL7N1Y0 4068 aa2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 ApobE9Q414 4505 aa2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 Ryr2E9Q401 4966 aaKnown RBP2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 Dnah9B1AR51 4484 aa2.87□□□□□ -1.95
Usp54-202ENSMUST00000035340 Sprr2iO70560 76 aa2.86□□□□□ -1.95
Usp54-202ENSMUST00000035340 Fras1Q80T14 4010 aa2.86□□□□□ -1.95
Usp54-202ENSMUST00000035340 Gm9789Q8BIG3 52 aa2.85□□□□□ -1.95
Usp54-202ENSMUST00000035340 Dnah7aE9Q0T8 4024 aa2.84□□□□□ -1.95
Usp54-202ENSMUST00000035340 Lce3dE9Q8V1 98 aa2.83□□□□□ -1.96
Usp54-202ENSMUST00000035340 Mt2P02798 61 aa2.82□□□□□ -1.96
Usp54-202ENSMUST00000035340 Ryr3A2AGL3 4863 aa2.8□□□□□ -1.96
Usp54-202ENSMUST00000035340 Csmd3Q80T79 3707 aa2.8□□□□□ -1.96
Usp54-202ENSMUST00000035340 Gm10272F7CZ33 110 aa2.8□□□□□ -1.96
Usp54-202ENSMUST00000035340 Lrp1Q91ZX7 4545 aaKnown RBP2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Lce3eF8VQJ0 98 aa2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Lce3fQ6PAI4 98 aa2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Mycbp2Q7TPH6 4711 aa2.79□□□□□ -1.96
Usp54-202ENSMUST00000035340 Gm10100J3QK64 120 aa2.78□□□□□ -1.96
Usp54-202ENSMUST00000035340 Dnah7cA0A087WR13 4024 aa2.77□□□□□ -1.97
Usp54-202ENSMUST00000035340 Krtap19-2Q925I0 141 aa2.77□□□□□ -1.97
Usp54-202ENSMUST00000035340 Fat3Q8BNA6 4555 aa2.76□□□□□ -1.97
Usp54-202ENSMUST00000035340 Gm38119A0A0A6YX29 146 aa2.74□□□□□ -1.97
Usp54-202ENSMUST00000035340 Lce3aQ497I5 98 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Krtap1-3A2A588 173 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Gm10142J3KMP7 120 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Gm10061D3Z714 54 aa2.73□□□□□ -1.97
Usp54-202ENSMUST00000035340 Sprr2fO70557 76 aa2.72□□□□□ -1.97
Usp54-202ENSMUST00000035340 Herc2Q4U2R1 4836 aa2.7□□□□□ -1.98
Usp54-202ENSMUST00000035340 Vps13bQ80TY5 3993 aa2.7□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lrp2A2ARV4 4660 aa2.68□□□□□ -1.98
Usp54-202ENSMUST00000035340 Gm11569B1AQB1 180 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1fB9EJP6 147 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1cQ9D1C5 147 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1lQ9D1G7 135 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Lce1dQ9D731 133 aa2.67□□□□□ -1.98
Usp54-202ENSMUST00000035340 Pkhd1E9PZ36 4059 aa2.65□□□□□ -1.99
Usp54-202ENSMUST00000035340 Pkhd1l1Q80ZA4 4249 aa2.64□□□□□ -1.99
Usp54-202ENSMUST00000035340 Krtap9-3Q3V2C1 136 aa2.64□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1bQ9D149 137 aa2.63□□□□□ -1.99
Usp54-202ENSMUST00000035340 Fat2Q5F226 4351 aa2.63□□□□□ -1.99
Usp54-202ENSMUST00000035340 Krtap19-4Q925H7 84 aa2.61□□□□□ -1.99
Usp54-202ENSMUST00000035340 Sprr2eO70556 76 aa2.61□□□□□ -1.99
Usp54-202ENSMUST00000035340 Gm10024A0A0A0MQA4 119 aa2.6□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1jD3YUU5 139 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1gQ9D195 139 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1iQ9D6P5 149 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Lce1hQ9D6R3 140 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Kiaa1109A2AAE1 5005 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Birc6O88738 4882 aa2.59□□□□□ -1.99
Usp54-202ENSMUST00000035340 Krtap4-2B1AQ85 167 aa2.58□□□□□ -2
Usp54-202ENSMUST00000035340 Lce1eQ9D139 143 aa2.58□□□□□ -2
Usp54-202ENSMUST00000035340 HydinQ80W93 5154 aa2.57□□□□□ -2
Usp54-202ENSMUST00000035340 Kmt2cQ8BRH4 4903 aa2.56□□□□□ -2
Usp54-202ENSMUST00000035340 PcloQ9QYX7 5068 aa2.52□□□□□ -2.01
Usp54-202ENSMUST00000035340 Mt4P47945 62 aa2.51□□□□□ -2.01
Usp54-202ENSMUST00000035340 Krtap17-1A2A5X6 109 aa2.49□□□□□ -2.01
Usp54-202ENSMUST00000035340 4932415D10RikA0A1W2P6U8 4986 aa2.47□□□□□ -2.01
Usp54-202ENSMUST00000035340 Krtap4-6Q3V4B7 195 aa2.46□□□□□ -2.02
Usp54-202ENSMUST00000035340 Abca13Q5SSE9 5034 aa2.42□□□□□ -2.02
Usp54-202ENSMUST00000035340 Eppk1Q8R0W0 6548 aa2.42□□□□□ -2.02
Usp54-202ENSMUST00000035340 Gm11596B1AQB0 205 aa2.41□□□□□ -2.02
Usp54-202ENSMUST00000035340 Muc5bE9Q5I3 4800 aa2.39□□□□□ -2.03
Usp54-202ENSMUST00000035340 Krtap4-1Q3UUY3 169 aa2.39□□□□□ -2.03
Usp54-202ENSMUST00000035340 Gm11938Q9D3H4 131 aa2.36□□□□□ -2.03
Usp54-202ENSMUST00000035340 Gm11564A2A4L9 201 aa2.36□□□□□ -2.03
Usp54-202ENSMUST00000035340 Gm11563B1AQ90 168 aa2.36□□□□□ -2.03
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms