RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gm17416Q30KP4 66 aa5.53□□□□□ -1.52
Topbp1-201ENSMUST00000035164 Ryr3A2AGL3 4863 aa5.52□□□□□ -1.53
Topbp1-201ENSMUST00000035164 Camk2n1Q6QWF9 78 aa5.51□□□□□ -1.53
Topbp1-201ENSMUST00000035164 2210017I01RikA0A0A6YVV1 95 aa5.51□□□□□ -1.53
Topbp1-201ENSMUST00000035164 Gm10318A0A1W2P728 225 aa5.5□□□□□ -1.53
Topbp1-201ENSMUST00000035164 Fat2Q5F226 4351 aa5.49□□□□□ -1.53
Topbp1-201ENSMUST00000035164 Gm9112A2AI92 75 aa5.49□□□□□ -1.53
Topbp1-201ENSMUST00000035164 Fat1A0A1L1SQU7 4645 aa5.49□□□□□ -1.53
Topbp1-201ENSMUST00000035164 SacsQ9JLC8 4582 aa5.47□□□□□ -1.53
Topbp1-201ENSMUST00000035164 Sec61bQ9CQS8 96 aaKnown RBP5.43□□□□□ -1.54
Topbp1-201ENSMUST00000035164 Pkhd1l1Q80ZA4 4249 aa5.41□□□□□ -1.54
Topbp1-201ENSMUST00000035164 Mycbp2Q7TPH6 4711 aa5.41□□□□□ -1.54
Topbp1-201ENSMUST00000035164 Krtap13-1Q8K198 168 aa5.4□□□□□ -1.54
Topbp1-201ENSMUST00000035164 Ryr1E9PZQ0 5035 aa5.37□□□□□ -1.55
Topbp1-201ENSMUST00000035164 HydinQ80W93 5154 aa5.36□□□□□ -1.55
Topbp1-201ENSMUST00000035164 Gm19668J3QMD1 248 aa5.36□□□□□ -1.55
Topbp1-201ENSMUST00000035164 Crct1Q6PAI5 102 aa5.35□□□□□ -1.55
Topbp1-201ENSMUST00000035164 Krtap7-1Q9D3I6 87 aa5.34□□□□□ -1.55
Topbp1-201ENSMUST00000035164 Gm40193A0A1B0GT39 78 aa5.32□□□□□ -1.56
Topbp1-201ENSMUST00000035164 Gm19402J3QJV4 266 aa5.29□□□□□ -1.56
Topbp1-201ENSMUST00000035164 Lrp2A2ARV4 4660 aa5.29□□□□□ -1.56
Topbp1-201ENSMUST00000035164 Abca13Q5SSE9 5034 aa5.23□□□□□ -1.57
Topbp1-201ENSMUST00000035164 Kmt2cQ8BRH4 4903 aa5.2□□□□□ -1.58
Topbp1-201ENSMUST00000035164 Gm17402F6Z0L5 76 aa5.19□□□□□ -1.58
Topbp1-201ENSMUST00000035164 Kiaa1109A2AAE1 5005 aa5.16□□□□□ -1.58
Topbp1-201ENSMUST00000035164 Tnp1P10856 55 aa5.09□□□□□ -1.6
Topbp1-201ENSMUST00000035164 Dnah8Q91XQ0 4731 aa5.07□□□□□ -1.6
Topbp1-201ENSMUST00000035164 Ryr2E9Q401 4966 aaKnown RBP5.07□□□□□ -1.6
Topbp1-201ENSMUST00000035164 Sprr2a3Q4KL71 83 aa5.03□□□□□ -1.6
Topbp1-201ENSMUST00000035164 Sprr2a1Q9CQK8 83 aa5.03□□□□□ -1.6
Topbp1-201ENSMUST00000035164 Herc2Q4U2R1 4836 aa5.03□□□□□ -1.6
Topbp1-201ENSMUST00000035164 Krtap1-5A2A590 122 aa5□□□□□ -1.61
Topbp1-201ENSMUST00000035164 Dnhd1D3Z2X2 4750 aa4.89□□□□□ -1.63
Topbp1-201ENSMUST00000035164 PcloQ9QYX7 5068 aa4.83□□□□□ -1.64
Topbp1-201ENSMUST00000035164 Krtap16-3Q8C1I6 86 aa4.81□□□□□ -1.64
Topbp1-201ENSMUST00000035164 Krtap1-4Q3V2D6 188 aa4.8□□□□□ -1.64
Topbp1-201ENSMUST00000035164 Ubr4A2AN08 5180 aa4.71□□□□□ -1.66
Topbp1-201ENSMUST00000035164 Krtap19-3Q925H6 87 aa4.7□□□□□ -1.66
Topbp1-201ENSMUST00000035164 Krtap19-1Q925H2 87 aa4.68□□□□□ -1.66
Topbp1-201ENSMUST00000035164 Fat4Q2PZL6 4981 aa4.67□□□□□ -1.66
Topbp1-201ENSMUST00000035164 LorP18165 486 aa4.66□□□□□ -1.66
Topbp1-201ENSMUST00000035164 Birc6O88738 4882 aa4.65□□□□□ -1.66
Topbp1-201ENSMUST00000035164 Krtap19-9aF8WH65 55 aa4.6□□□□□ -1.67
Topbp1-201ENSMUST00000035164 Krtap12-1Q9Z287 130 aa4.59□□□□□ -1.67
Topbp1-201ENSMUST00000035164 Lce1jD3YUU5 139 aa4.58□□□□□ -1.68
Topbp1-201ENSMUST00000035164 Herc1E9PZP8 4859 aa4.57□□□□□ -1.68
Topbp1-201ENSMUST00000035164 ZanO88799 5376 aa4.52□□□□□ -1.69
Topbp1-201ENSMUST00000035164 Ush2AQ2QI47 5193 aa4.51□□□□□ -1.69
Topbp1-201ENSMUST00000035164 Hmcn2A2AJ76 5100 aa4.45□□□□□ -1.7
Topbp1-201ENSMUST00000035164 Krtap19-9bQ99NG9 58 aa4.44□□□□□ -1.7
Topbp1-201ENSMUST00000035164 4932415D10RikA0A1W2P6U8 4986 aa4.39□□□□□ -1.71
Topbp1-201ENSMUST00000035164 Rnf213E9Q555 5152 aaKnown RBP4.39□□□□□ -1.71
Topbp1-201ENSMUST00000035164 Krtap17-1A2A5X6 109 aa4.36□□□□□ -1.71
Topbp1-201ENSMUST00000035164 Krtap8-1O08633 61 aa4.35□□□□□ -1.71
Topbp1-201ENSMUST00000035164 Krtap1-3A2A588 173 aa4.33□□□□□ -1.72
Topbp1-201ENSMUST00000035164 2310046K23RikA0A0A6YVW6 87 aa4.32□□□□□ -1.72
Topbp1-201ENSMUST00000035164 Krtap9-5A2A5X3 358 aa4.3□□□□□ -1.72
Topbp1-201ENSMUST00000035164 4933428G20RikQ9D3X4 101 aa4.29□□□□□ -1.72
Topbp1-201ENSMUST00000035164 Krtap9-3Q3V2C1 136 aa4.28□□□□□ -1.73
Topbp1-201ENSMUST00000035164 Syne1Q6ZWR6 8799 aa4.27□□□□□ -1.73
Topbp1-201ENSMUST00000035164 Mdn1A2ANY6 5589 aaKnown RBP4.27□□□□□ -1.73
Topbp1-201ENSMUST00000035164 Gm18596A0A1W2P860 280 aa4.25□□□□□ -1.73
Topbp1-201ENSMUST00000035164 Lce1iQ9D6P5 149 aa4.21□□□□□ -1.73
Topbp1-201ENSMUST00000035164 Gm6358A0A087WPH4 74 aa4.2□□□□□ -1.74
Topbp1-201ENSMUST00000035164 Krtap19-2Q925I0 141 aa4.19□□□□□ -1.74
Topbp1-201ENSMUST00000035164 Lce1a2Q9D1K4 149 aa4.19□□□□□ -1.74
Topbp1-201ENSMUST00000035164 Lce1mQ9CR91 182 aa4.17□□□□□ -1.74
Topbp1-201ENSMUST00000035164 Lce1hQ9D6R3 140 aa4.17□□□□□ -1.74
Topbp1-201ENSMUST00000035164 Mt2P02798 61 aa4.09□□□□□ -1.75
Topbp1-201ENSMUST00000035164 Muc16A0A140LJ72 8478 aa4.07□□□□□ -1.76
Topbp1-201ENSMUST00000035164 Gm10272F7CZ33 110 aa4.04□□□□□ -1.76
Topbp1-201ENSMUST00000035164 Lce1dQ9D731 133 aa4.02□□□□□ -1.77
Topbp1-201ENSMUST00000035164 Gm10100J3QK64 120 aa3.95□□□□□ -1.78
Topbp1-201ENSMUST00000035164 Gm9789Q8BIG3 52 aa3.93□□□□□ -1.78
Topbp1-201ENSMUST00000035164 SspoQ8CG65 4998 aa3.93□□□□□ -1.78
Topbp1-201ENSMUST00000035164 Gm7735D3YX18 52 aa3.89□□□□□ -1.79
Topbp1-201ENSMUST00000035164 Sprr2gO70558 76 aa3.87□□□□□ -1.79
Topbp1-201ENSMUST00000035164 Krtap22-2J3QNX6 67 aa3.86□□□□□ -1.79
Topbp1-201ENSMUST00000035164 Prm1P02319 51 aa3.85□□□□□ -1.79
Topbp1-201ENSMUST00000035164 Lce3bQ9CQM7 98 aa3.85□□□□□ -1.79
Topbp1-201ENSMUST00000035164 Lce1eQ9D139 143 aa3.83□□□□□ -1.8
Topbp1-201ENSMUST00000035164 Gm11938Q9D3H4 131 aa3.82□□□□□ -1.8
Topbp1-201ENSMUST00000035164 Gm10142J3KMP7 120 aa3.81□□□□□ -1.8
Topbp1-201ENSMUST00000035164 Gm10061D3Z714 54 aa3.77□□□□□ -1.81
Topbp1-201ENSMUST00000035164 Lce3cQ91V05 98 aa3.73□□□□□ -1.81
Topbp1-201ENSMUST00000035164 Lce1cQ9D1C5 147 aa3.73□□□□□ -1.81
Topbp1-201ENSMUST00000035164 Lce3dE9Q8V1 98 aa3.69□□□□□ -1.82
Topbp1-201ENSMUST00000035164 Sprr2dO70555 85 aa3.66□□□□□ -1.82
Topbp1-201ENSMUST00000035164 Muc5bE9Q5I3 4800 aa3.63□□□□□ -1.83
Topbp1-201ENSMUST00000035164 Lce3eF8VQJ0 98 aa3.62□□□□□ -1.83
Topbp1-201ENSMUST00000035164 Lce3fQ6PAI4 98 aa3.62□□□□□ -1.83
Topbp1-201ENSMUST00000035164 Lce1fB9EJP6 147 aa3.58□□□□□ -1.84
Topbp1-201ENSMUST00000035164 Lce1a1Q9CQH5 143 aa3.58□□□□□ -1.84
Topbp1-201ENSMUST00000035164 A0A1Y7VLE6 161 aa3.58□□□□□ -1.84
Topbp1-201ENSMUST00000035164 Fsip2A2ARZ3 6995 aa3.58□□□□□ -1.84
Topbp1-201ENSMUST00000035164 ObscnA2AAJ9 8891 aaKnown RBP3.56□□□□□ -1.84
Topbp1-201ENSMUST00000035164 Lce3aQ497I5 98 aa3.54□□□□□ -1.84
Topbp1-201ENSMUST00000035164 Gm11569B1AQB1 180 aa3.53□□□□□ -1.84
Topbp1-201ENSMUST00000035164 Krtap19-4Q925H7 84 aa3.52□□□□□ -1.85
Topbp1-201ENSMUST00000035164 Gm38119A0A0A6YX29 146 aa3.48□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms