RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 Ryr2E9Q401 4966 aaKnown RBP5.06□□□□□ -1.6
Stra6-201ENSMUST00000034880 Kmt2cQ8BRH4 4903 aa5.04□□□□□ -1.6
Stra6-201ENSMUST00000034880 Ndufaf8A2AMZ4 74 aa5.04□□□□□ -1.6
Stra6-201ENSMUST00000034880 Gm19426M0QWC7 77 aa5.02□□□□□ -1.61
Stra6-201ENSMUST00000034880 Abca13Q5SSE9 5034 aa4.99□□□□□ -1.61
Stra6-201ENSMUST00000034880 B930094E09RikQ8C4T2 136 aa4.98□□□□□ -1.61
Stra6-201ENSMUST00000034880 Gm17416Q30KP4 66 aa4.97□□□□□ -1.61
Stra6-201ENSMUST00000034880 Krtap7-1Q9D3I6 87 aa4.94□□□□□ -1.62
Stra6-201ENSMUST00000034880 2210017I01RikA0A0A6YVV1 95 aa4.93□□□□□ -1.62
Stra6-201ENSMUST00000034880 Dnah8Q91XQ0 4731 aa4.9□□□□□ -1.62
Stra6-201ENSMUST00000034880 Gm19668J3QMD1 248 aa4.89□□□□□ -1.63
Stra6-201ENSMUST00000034880 2310057N15RikQ9D6T8 200 aa4.88□□□□□ -1.63
Stra6-201ENSMUST00000034880 Gm19402J3QJV4 266 aa4.87□□□□□ -1.63
Stra6-201ENSMUST00000034880 BC029722A0A0N4SW31 51 aa4.85□□□□□ -1.63
Stra6-201ENSMUST00000034880 Krtap13-1Q8K198 168 aa4.83□□□□□ -1.64
Stra6-201ENSMUST00000034880 Kiaa1109A2AAE1 5005 aa4.82□□□□□ -1.64
Stra6-201ENSMUST00000034880 Herc2Q4U2R1 4836 aa4.8□□□□□ -1.64
Stra6-201ENSMUST00000034880 HydinQ80W93 5154 aa4.79□□□□□ -1.64
Stra6-201ENSMUST00000034880 PcloQ9QYX7 5068 aa4.78□□□□□ -1.64
Stra6-201ENSMUST00000034880 Fam229aB2KGE5 128 aa4.77□□□□□ -1.65
Stra6-201ENSMUST00000034880 Lrp2A2ARV4 4660 aa4.72□□□□□ -1.65
Stra6-201ENSMUST00000034880 Gm17402F6Z0L5 76 aa4.69□□□□□ -1.66
Stra6-201ENSMUST00000034880 Dnhd1D3Z2X2 4750 aa4.69□□□□□ -1.66
Stra6-201ENSMUST00000034880 Gm40193A0A1B0GT39 78 aa4.68□□□□□ -1.66
Stra6-201ENSMUST00000034880 Gm10318A0A1W2P728 225 aa4.67□□□□□ -1.66
Stra6-201ENSMUST00000034880 Birc6O88738 4882 aa4.66□□□□□ -1.66
Stra6-201ENSMUST00000034880 Krtap1-5A2A590 122 aa4.64□□□□□ -1.67
Stra6-201ENSMUST00000034880 Spink7Q6IE32 76 aa4.63□□□□□ -1.67
Stra6-201ENSMUST00000034880 Sprr2a3Q4KL71 83 aa4.63□□□□□ -1.67
Stra6-201ENSMUST00000034880 Sprr2a1Q9CQK8 83 aa4.63□□□□□ -1.67
Stra6-201ENSMUST00000034880 Gm9112A2AI92 75 aa4.62□□□□□ -1.67
Stra6-201ENSMUST00000034880 Sec61bQ9CQS8 96 aaKnown RBP4.61□□□□□ -1.67
Stra6-201ENSMUST00000034880 Crct1Q6PAI5 102 aa4.59□□□□□ -1.67
Stra6-201ENSMUST00000034880 Herc1E9PZP8 4859 aa4.58□□□□□ -1.68
Stra6-201ENSMUST00000034880 Camk2n1Q6QWF9 78 aa4.49□□□□□ -1.69
Stra6-201ENSMUST00000034880 Krtap16-3Q8C1I6 86 aa4.49□□□□□ -1.69
Stra6-201ENSMUST00000034880 Krtap19-1Q925H2 87 aa4.39□□□□□ -1.71
Stra6-201ENSMUST00000034880 Ubr4A2AN08 5180 aa4.37□□□□□ -1.71
Stra6-201ENSMUST00000034880 Krtap19-3Q925H6 87 aa4.36□□□□□ -1.71
Stra6-201ENSMUST00000034880 Krtap1-4Q3V2D6 188 aa4.35□□□□□ -1.71
Stra6-201ENSMUST00000034880 Lce1mQ9CR91 182 aa4.32□□□□□ -1.72
Stra6-201ENSMUST00000034880 Gm18596A0A1W2P860 280 aa4.29□□□□□ -1.72
Stra6-201ENSMUST00000034880 ZanO88799 5376 aa4.29□□□□□ -1.72
Stra6-201ENSMUST00000034880 Ush2AQ2QI47 5193 aa4.26□□□□□ -1.73
Stra6-201ENSMUST00000034880 Tnp1P10856 55 aa4.26□□□□□ -1.73
Stra6-201ENSMUST00000034880 Lce1jD3YUU5 139 aa4.24□□□□□ -1.73
Stra6-201ENSMUST00000034880 Fat4Q2PZL6 4981 aa4.22□□□□□ -1.73
Stra6-201ENSMUST00000034880 4932415D10RikA0A1W2P6U8 4986 aa4.22□□□□□ -1.73
Stra6-201ENSMUST00000034880 Hmcn2A2AJ76 5100 aa4.19□□□□□ -1.74
Stra6-201ENSMUST00000034880 Krtap1-3A2A588 173 aa4.13□□□□□ -1.75
Stra6-201ENSMUST00000034880 LorP18165 486 aa4.12□□□□□ -1.75
Stra6-201ENSMUST00000034880 Krtap12-1Q9Z287 130 aa4.11□□□□□ -1.75
Stra6-201ENSMUST00000034880 Krtap17-1A2A5X6 109 aa4.1□□□□□ -1.75
Stra6-201ENSMUST00000034880 Krtap19-9aF8WH65 55 aa4.09□□□□□ -1.75
Stra6-201ENSMUST00000034880 Rnf213E9Q555 5152 aaKnown RBP4.06□□□□□ -1.76
Stra6-201ENSMUST00000034880 2310046K23RikA0A0A6YVW6 87 aa4.02□□□□□ -1.77
Stra6-201ENSMUST00000034880 Krtap8-1O08633 61 aa4.01□□□□□ -1.77
Stra6-201ENSMUST00000034880 Krtap9-3Q3V2C1 136 aa4.01□□□□□ -1.77
Stra6-201ENSMUST00000034880 Lce1iQ9D6P5 149 aa3.97□□□□□ -1.77
Stra6-201ENSMUST00000034880 Gm9789Q8BIG3 52 aa3.96□□□□□ -1.77
Stra6-201ENSMUST00000034880 Lce1a2Q9D1K4 149 aa3.96□□□□□ -1.78
Stra6-201ENSMUST00000034880 Gm7735D3YX18 52 aa3.96□□□□□ -1.78
Stra6-201ENSMUST00000034880 Krtap19-9bQ99NG9 58 aa3.94□□□□□ -1.78
Stra6-201ENSMUST00000034880 Lce1hQ9D6R3 140 aa3.93□□□□□ -1.78
Stra6-201ENSMUST00000034880 Prm1P02319 51 aa3.91□□□□□ -1.78
Stra6-201ENSMUST00000034880 Krtap19-2Q925I0 141 aa3.84□□□□□ -1.79
Stra6-201ENSMUST00000034880 Krtap9-5A2A5X3 358 aa3.84□□□□□ -1.8
Stra6-201ENSMUST00000034880 Lce1dQ9D731 133 aa3.83□□□□□ -1.8
Stra6-201ENSMUST00000034880 SspoQ8CG65 4998 aa3.81□□□□□ -1.8
Stra6-201ENSMUST00000034880 Lce1eQ9D139 143 aa3.68□□□□□ -1.82
Stra6-201ENSMUST00000034880 Mdn1A2ANY6 5589 aaKnown RBP3.65□□□□□ -1.82
Stra6-201ENSMUST00000034880 Gm10061D3Z714 54 aa3.63□□□□□ -1.83
Stra6-201ENSMUST00000034880 Mt2P02798 61 aa3.62□□□□□ -1.83
Stra6-201ENSMUST00000034880 Sprr2gO70558 76 aa3.6□□□□□ -1.83
Stra6-201ENSMUST00000034880 Muc5bE9Q5I3 4800 aa3.6□□□□□ -1.83
Stra6-201ENSMUST00000034880 Gm6358A0A087WPH4 74 aa3.6□□□□□ -1.83
Stra6-201ENSMUST00000034880 Gm11938Q9D3H4 131 aa3.6□□□□□ -1.83
Stra6-201ENSMUST00000034880 4933428G20RikQ9D3X4 101 aa3.57□□□□□ -1.84
Stra6-201ENSMUST00000034880 Gm11569B1AQB1 180 aa3.51□□□□□ -1.85
Stra6-201ENSMUST00000034880 Gm10272F7CZ33 110 aa3.51□□□□□ -1.85
Stra6-201ENSMUST00000034880 Sprr2dO70555 85 aa3.5□□□□□ -1.85
Stra6-201ENSMUST00000034880 Lce1cQ9D1C5 147 aa3.48□□□□□ -1.85
Stra6-201ENSMUST00000034880 Krtap31-1Q9D644 177 aa3.44□□□□□ -1.86
Stra6-201ENSMUST00000034880 Krtap22-2J3QNX6 67 aa3.39□□□□□ -1.87
Stra6-201ENSMUST00000034880 Lce1fB9EJP6 147 aa3.36□□□□□ -1.87
Stra6-201ENSMUST00000034880 Lce1a1Q9CQH5 143 aa3.36□□□□□ -1.87
Stra6-201ENSMUST00000034880 Krtap4-2B1AQ85 167 aa3.33□□□□□ -1.88
Stra6-201ENSMUST00000034880 Gm10100J3QK64 120 aa3.33□□□□□ -1.88
Stra6-201ENSMUST00000034880 Fsip2A2ARZ3 6995 aa3.31□□□□□ -1.88
Stra6-201ENSMUST00000034880 Syne2Q6ZWQ0 6874 aaKnown RBP3.3□□□□□ -1.88
Stra6-201ENSMUST00000034880 Gm11562A0PK51 136 aa3.3□□□□□ -1.88
Stra6-201ENSMUST00000034880 Krtap4-6Q3V4B7 195 aa3.3□□□□□ -1.88
Stra6-201ENSMUST00000034880 Krtap31-2Q8CAY5 177 aa3.29□□□□□ -1.88
Stra6-201ENSMUST00000034880 Lce3bQ9CQM7 98 aa3.29□□□□□ -1.88
Stra6-201ENSMUST00000034880 Gm10142J3KMP7 120 aa3.27□□□□□ -1.89
Stra6-201ENSMUST00000034880 Lce1gQ9D195 139 aa3.27□□□□□ -1.89
Stra6-201ENSMUST00000034880 Krtap19-4Q925H7 84 aa3.22□□□□□ -1.89
Stra6-201ENSMUST00000034880 Sprr2iO70560 76 aa3.21□□□□□ -1.89
Stra6-201ENSMUST00000034880 Syne1Q6ZWR6 8799 aa3.21□□□□□ -1.9
Stra6-201ENSMUST00000034880 Krtap4-1Q3UUY3 169 aa3.2□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 106.1 ms