RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 SacsQ9JLC8 4582 aa8.57□□□□□ -1.04
Sh3rf1-201ENSMUST00000034060 Dnah1E9Q8T7 4250 aa8.56□□□□□ -1.04
Sh3rf1-201ENSMUST00000034060 Dnah3Q8BW94 4083 aa8.54□□□□□ -1.04
Sh3rf1-201ENSMUST00000034060 Dnah11E9Q7N9 4488 aa8.51□□□□□ -1.05
Sh3rf1-201ENSMUST00000034060 Lce3bQ9CQM7 98 aa8.48□□□□□ -1.05
Sh3rf1-201ENSMUST00000034060 ApobE9Q414 4505 aa8.44□□□□□ -1.06
Sh3rf1-201ENSMUST00000034060 Gm10142J3KMP7 120 aa8.42□□□□□ -1.06
Sh3rf1-201ENSMUST00000034060 Gm10272F7CZ33 110 aa8.41□□□□□ -1.06
Sh3rf1-201ENSMUST00000034060 Dync1h1Q9JHU4 4644 aaKnown RBP8.4□□□□□ -1.06
Sh3rf1-201ENSMUST00000034060 Krtap16-3Q8C1I6 86 aa8.4□□□□□ -1.07
Sh3rf1-201ENSMUST00000034060 Lce3cQ91V05 98 aa8.4□□□□□ -1.07
Sh3rf1-201ENSMUST00000034060 Krtap19-3Q925H6 87 aa8.36□□□□□ -1.07
Sh3rf1-201ENSMUST00000034060 Sprr2gO70558 76 aa8.36□□□□□ -1.07
Sh3rf1-201ENSMUST00000034060 Krtap9-5A2A5X3 358 aa8.34□□□□□ -1.07
Sh3rf1-201ENSMUST00000034060 Dnah9B1AR51 4484 aa8.33□□□□□ -1.08
Sh3rf1-201ENSMUST00000034060 Dnah7bL7N1Y0 4068 aa8.29□□□□□ -1.08
Sh3rf1-201ENSMUST00000034060 LystP97412 3788 aa8.29□□□□□ -1.08
Sh3rf1-201ENSMUST00000034060 Dnah8Q91XQ0 4731 aa8.29□□□□□ -1.08
Sh3rf1-201ENSMUST00000034060 Fat1A0A1L1SQU7 4645 aa8.29□□□□□ -1.08
Sh3rf1-201ENSMUST00000034060 Csmd2V9GX34 3611 aa8.26□□□□□ -1.09
Sh3rf1-201ENSMUST00000034060 Pkd1O08852 4293 aa8.26□□□□□ -1.09
Sh3rf1-201ENSMUST00000034060 Muc4Q8JZM8 3443 aa8.24□□□□□ -1.09
Sh3rf1-201ENSMUST00000034060 Lce3eF8VQJ0 98 aa8.21□□□□□ -1.09
Sh3rf1-201ENSMUST00000034060 Lce3fQ6PAI4 98 aa8.21□□□□□ -1.09
Sh3rf1-201ENSMUST00000034060 BsnO88737 3942 aa8.21□□□□□ -1.09
Sh3rf1-201ENSMUST00000034060 Krtap19-1Q925H2 87 aa8.19□□□□□ -1.1
Sh3rf1-201ENSMUST00000034060 Lrp1bQ9JI18 4599 aa8.17□□□□□ -1.1
Sh3rf1-201ENSMUST00000034060 Lce3dE9Q8V1 98 aa8.16□□□□□ -1.1
Sh3rf1-201ENSMUST00000034060 TnxbO35452 4006 aa8.08□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 Krtap22-2J3QNX6 67 aa8.08□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 Lce1mQ9CR91 182 aa8.07□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 Hspg2Q05793 3707 aaKnown RBP8.07□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 CubnQ9JLB4 3623 aa8.04□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 Hectd4E9Q2E4 4418 aa8.04□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 Xirp2Q4U4S6 3784 aa8.04□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 Csmd3Q80T79 3707 aa8.03□□□□□ -1.12
Sh3rf1-201ENSMUST00000034060 PrkdcP97313 4128 aa8.02□□□□□ -1.13
Sh3rf1-201ENSMUST00000034060 Mt2P02798 61 aa8.01□□□□□ -1.13
Sh3rf1-201ENSMUST00000034060 Lce3aQ497I5 98 aa8.01□□□□□ -1.13
Sh3rf1-201ENSMUST00000034060 Lrp1Q91ZX7 4545 aaKnown RBP7.95□□□□□ -1.14
Sh3rf1-201ENSMUST00000034060 Ryr1E9PZQ0 5035 aa7.93□□□□□ -1.14
Sh3rf1-201ENSMUST00000034060 Fras1Q80T14 4010 aa7.92□□□□□ -1.14
Sh3rf1-201ENSMUST00000034060 Fat3Q8BNA6 4555 aa7.91□□□□□ -1.14
Sh3rf1-201ENSMUST00000034060 Prm1P02319 51 aa7.83□□□□□ -1.16
Sh3rf1-201ENSMUST00000034060 Mycbp2Q7TPH6 4711 aa7.82□□□□□ -1.16
Sh3rf1-201ENSMUST00000034060 Krtap19-4Q925H7 84 aa7.79□□□□□ -1.16
Sh3rf1-201ENSMUST00000034060 Sprr2iO70560 76 aa7.79□□□□□ -1.16
Sh3rf1-201ENSMUST00000034060 Krtap9-3Q3V2C1 136 aa7.78□□□□□ -1.16
Sh3rf1-201ENSMUST00000034060 Krtap19-2Q925I0 141 aa7.78□□□□□ -1.16
Sh3rf1-201ENSMUST00000034060 Herc1E9PZP8 4859 aa7.76□□□□□ -1.17
Sh3rf1-201ENSMUST00000034060 Gm10024A0A0A0MQA4 119 aa7.74□□□□□ -1.17
Sh3rf1-201ENSMUST00000034060 Dnhd1D3Z2X2 4750 aa7.73□□□□□ -1.17
Sh3rf1-201ENSMUST00000034060 Dnah6E9Q0B6 4144 aa7.72□□□□□ -1.17
Sh3rf1-201ENSMUST00000034060 Kmt2aP55200 3966 aa7.68□□□□□ -1.18
Sh3rf1-201ENSMUST00000034060 Dnah7cA0A087WR13 4024 aa7.67□□□□□ -1.18
Sh3rf1-201ENSMUST00000034060 Ryr2E9Q401 4966 aaKnown RBP7.63□□□□□ -1.19
Sh3rf1-201ENSMUST00000034060 Dnah7aE9Q0T8 4024 aa7.61□□□□□ -1.19
Sh3rf1-201ENSMUST00000034060 Lce1jD3YUU5 139 aa7.58□□□□□ -1.2
Sh3rf1-201ENSMUST00000034060 Lce1gQ9D195 139 aa7.55□□□□□ -1.2
Sh3rf1-201ENSMUST00000034060 Lce1iQ9D6P5 149 aa7.55□□□□□ -1.2
Sh3rf1-201ENSMUST00000034060 Lce1hQ9D6R3 140 aa7.55□□□□□ -1.2
Sh3rf1-201ENSMUST00000034060 Fat2Q5F226 4351 aa7.49□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Gm38119A0A0A6YX29 146 aa7.48□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Lce1fB9EJP6 147 aa7.47□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Lce1cQ9D1C5 147 aa7.47□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Lce1lQ9D1G7 135 aa7.47□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Lce1dQ9D731 133 aa7.47□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Krtap1-3A2A588 173 aa7.47□□□□□ -1.21
Sh3rf1-201ENSMUST00000034060 Lce1eQ9D139 143 aa7.41□□□□□ -1.22
Sh3rf1-201ENSMUST00000034060 Gm7735D3YX18 52 aa7.36□□□□□ -1.23
Sh3rf1-201ENSMUST00000034060 Sprr2eO70556 76 aa7.36□□□□□ -1.23
Sh3rf1-201ENSMUST00000034060 Lce1bQ9D149 137 aa7.35□□□□□ -1.23
Sh3rf1-201ENSMUST00000034060 Ryr3A2AGL3 4863 aa7.28□□□□□ -1.24
Sh3rf1-201ENSMUST00000034060 Gm9789Q8BIG3 52 aa7.27□□□□□ -1.25
Sh3rf1-201ENSMUST00000034060 Vps13bQ80TY5 3993 aa7.2□□□□□ -1.26
Sh3rf1-201ENSMUST00000034060 Sprr2hO70559 108 aa7.19□□□□□ -1.26
Sh3rf1-201ENSMUST00000034060 Lrp2A2ARV4 4660 aa7.15□□□□□ -1.27
Sh3rf1-201ENSMUST00000034060 Sprr2dO70555 85 aa7.13□□□□□ -1.27
Sh3rf1-201ENSMUST00000034060 Gm10061D3Z714 54 aa7.11□□□□□ -1.27
Sh3rf1-201ENSMUST00000034060 Sprr2fO70557 76 aa7.11□□□□□ -1.27
Sh3rf1-201ENSMUST00000034060 Pkhd1l1Q80ZA4 4249 aa7.07□□□□□ -1.28
Sh3rf1-201ENSMUST00000034060 Krtap31-1Q9D644 177 aa7.02□□□□□ -1.29
Sh3rf1-201ENSMUST00000034060 Herc2Q4U2R1 4836 aa7.01□□□□□ -1.29
Sh3rf1-201ENSMUST00000034060 Lce1a2Q9D1K4 149 aa6.9□□□□□ -1.3
Sh3rf1-201ENSMUST00000034060 Kmt2cQ8BRH4 4903 aa6.9□□□□□ -1.3
Sh3rf1-201ENSMUST00000034060 Gm11569B1AQB1 180 aa6.88□□□□□ -1.31
Sh3rf1-201ENSMUST00000034060 Gm11938Q9D3H4 131 aa6.87□□□□□ -1.31
Sh3rf1-201ENSMUST00000034060 Kiaa1109A2AAE1 5005 aa6.82□□□□□ -1.32
Sh3rf1-201ENSMUST00000034060 Pkhd1E9PZ36 4059 aa6.79□□□□□ -1.32
Sh3rf1-201ENSMUST00000034060 PcloQ9QYX7 5068 aa6.75□□□□□ -1.33
Sh3rf1-201ENSMUST00000034060 Gm11562A0PK51 136 aa6.71□□□□□ -1.34
Sh3rf1-201ENSMUST00000034060 HydinQ80W93 5154 aa6.66□□□□□ -1.34
Sh3rf1-201ENSMUST00000034060 Mt4P47945 62 aa6.63□□□□□ -1.35
Sh3rf1-201ENSMUST00000034060 Birc6O88738 4882 aa6.6□□□□□ -1.35
Sh3rf1-201ENSMUST00000034060 Krtap4-6Q3V4B7 195 aa6.39□□□□□ -1.39
Sh3rf1-201ENSMUST00000034060 Hmcn2A2AJ76 5100 aa6.37□□□□□ -1.39
Sh3rf1-201ENSMUST00000034060 Mt3P28184 68 aa6.32□□□□□ -1.4
Sh3rf1-201ENSMUST00000034060 Krtap4-2B1AQ85 167 aa6.28□□□□□ -1.4
Sh3rf1-201ENSMUST00000034060 Krtap4-16Q91W93 202 aa6.27□□□□□ -1.41
Sh3rf1-201ENSMUST00000034060 Syne1Q6ZWR6 8799 aa6.26□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms