RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Q8BGJ3 129 aa4.53□□□□□ -1.68
Ssr3-201ENSMUST00000029414 Gm19668J3QMD1 248 aa4.51□□□□□ -1.69
Ssr3-201ENSMUST00000029414 Spaca4Q80ZQ0 127 aa4.51□□□□□ -1.69
Ssr3-201ENSMUST00000029414 C130032M10RikQ8C888 123 aa4.51□□□□□ -1.69
Ssr3-201ENSMUST00000029414 1700018G05RikA0A1B0GSI2 66 aa4.5□□□□□ -1.69
Ssr3-201ENSMUST00000029414 Gm37013Q8K491 104 aa4.49□□□□□ -1.69
Ssr3-201ENSMUST00000029414 Gm5767A0A0J9YTU8 78 aa4.49□□□□□ -1.69
Ssr3-201ENSMUST00000029414 Ndufb1P0DN34 57 aa4.47□□□□□ -1.69
Ssr3-201ENSMUST00000029414 Mrpl34Q99N91 92 aa4.47□□□□□ -1.69
Ssr3-201ENSMUST00000029414 Gm2310J3QNJ2 377 aa4.46□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Limd2Q8BGB5 128 aa4.46□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Gm38119A0A0A6YX29 146 aa4.45□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Gm10267M0QWD8 85 aa4.45□□□□□ -1.7
Ssr3-201ENSMUST00000029414 CriptO70333 101 aa4.45□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Krtap1-3A2A588 173 aa4.45□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Lce1jD3YUU5 139 aa4.44□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Rnase13Q5GAM7 153 aa4.44□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Ndufaf8A2AMZ4 74 aa4.43□□□□□ -1.7
Ssr3-201ENSMUST00000029414 ZanO88799 5376 aa4.43□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Krtap28-10A0A1Y7VP58 119 aa4.42□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Krtap31-1Q9D644 177 aa4.41□□□□□ -1.7
Ssr3-201ENSMUST00000029414 Gm16253D3Z167 63 aa4.38□□□□□ -1.71
Ssr3-201ENSMUST00000029414 Krtap15-1Q9QZU5 150 aa4.38□□□□□ -1.71
Ssr3-201ENSMUST00000029414 2310057N15RikQ9D6T8 200 aa4.38□□□□□ -1.71
Ssr3-201ENSMUST00000029414 Lce1hQ9D6R3 140 aa4.35□□□□□ -1.71
Ssr3-201ENSMUST00000029414 Fat4Q2PZL6 4981 aa4.35□□□□□ -1.71
Ssr3-201ENSMUST00000029414 A0A1Y7VLE6 161 aa4.34□□□□□ -1.71
Ssr3-201ENSMUST00000029414 Crct1Q6PAI5 102 aa4.33□□□□□ -1.72
Ssr3-201ENSMUST00000029414 Rnf213E9Q555 5152 aaKnown RBP4.33□□□□□ -1.72
Ssr3-201ENSMUST00000029414 LorP18165 486 aa4.31□□□□□ -1.72
Ssr3-201ENSMUST00000029414 Krtap3-1A2A591 98 aa4.3□□□□□ -1.72
Ssr3-201ENSMUST00000029414 Krtap28-13A0A087WQP5 138 aa4.28□□□□□ -1.72
Ssr3-201ENSMUST00000029414 Gm11562A0PK51 136 aa4.27□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Uqcr11Q9CPX8 56 aa4.26□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Rpl37Q9D823 97 aa4.26□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Krtap17-1A2A5X6 109 aa4.26□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Gm9112A2AI92 75 aa4.25□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Gm3880A0A1B0GSB3 72 aa4.23□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Gm10061D3Z714 54 aa4.23□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Krtap16-3Q8C1I6 86 aa4.22□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Krtap19-3Q925H6 87 aa4.22□□□□□ -1.73
Ssr3-201ENSMUST00000029414 Krtap19-1Q925H2 87 aa4.21□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Lce1bQ9D149 137 aa4.21□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Gm21798J3QNU5 87 aa4.2□□□□□ -1.74
Ssr3-201ENSMUST00000029414 A030005K14RikA0A1Y7VNY1 122 aa4.19□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Defb13Q8R2I4 64 aa4.17□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Krtap1-4Q3V2D6 188 aa4.17□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Defb1P56386 69 aa4.17□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Gm11569B1AQB1 180 aa4.15□□□□□ -1.74
Ssr3-201ENSMUST00000029414 Gm10318A0A1W2P728 225 aa4.14□□□□□ -1.75
Ssr3-201ENSMUST00000029414 SspoQ8CG65 4998 aa4.12□□□□□ -1.75
Ssr3-201ENSMUST00000029414 Fam229aB2KGE5 128 aa4.1□□□□□ -1.75
Ssr3-201ENSMUST00000029414 A030005L19RikA0A1Y7VIU2 113 aa4.05□□□□□ -1.76
Ssr3-201ENSMUST00000029414 Lce1gQ9D195 139 aa4.05□□□□□ -1.76
Ssr3-201ENSMUST00000029414 Gm20537G3UYK7 97 aa4.03□□□□□ -1.76
Ssr3-201ENSMUST00000029414 Lce1eQ9D139 143 aa4.01□□□□□ -1.77
Ssr3-201ENSMUST00000029414 Gm4491E0CX42 125 aa4.01□□□□□ -1.77
Ssr3-201ENSMUST00000029414 Gm17416Q30KP4 66 aa4□□□□□ -1.77
Ssr3-201ENSMUST00000029414 Gm10999F6Q4M4 69 aa3.99□□□□□ -1.77
Ssr3-201ENSMUST00000029414 Lce1a1Q9CQH5 143 aa3.99□□□□□ -1.77
Ssr3-201ENSMUST00000029414 2310079G19RikQ9D6L6 185 aa3.96□□□□□ -1.78
Ssr3-201ENSMUST00000029414 4930507D05RikQ8C9C9 103 aa3.94□□□□□ -1.78
Ssr3-201ENSMUST00000029414 Syne2Q6ZWQ0 6874 aaKnown RBP3.93□□□□□ -1.78
Ssr3-201ENSMUST00000029414 Krtap13-1Q8K198 168 aa3.93□□□□□ -1.78
Ssr3-201ENSMUST00000029414 Muc5bE9Q5I3 4800 aa3.92□□□□□ -1.78
Ssr3-201ENSMUST00000029414 Krtap1-5A2A590 122 aa3.89□□□□□ -1.79
Ssr3-201ENSMUST00000029414 Gm11596B1AQB0 205 aa3.88□□□□□ -1.79
Ssr3-201ENSMUST00000029414 B930094E09RikQ8C4T2 136 aa3.88□□□□□ -1.79
Ssr3-201ENSMUST00000029414 Gm11559Q9D3H7 191 aa3.87□□□□□ -1.79
Ssr3-201ENSMUST00000029414 Gm7544A0A1Y7VJ58 118 aa3.87□□□□□ -1.79
Ssr3-201ENSMUST00000029414 Gm10382Q3V0T5 144 aa3.86□□□□□ -1.79
Ssr3-201ENSMUST00000029414 Krtap4-6Q3V4B7 195 aa3.82□□□□□ -1.8
Ssr3-201ENSMUST00000029414 Krtap19-2Q925I0 141 aa3.8□□□□□ -1.8
Ssr3-201ENSMUST00000029414 Krtap9-5A2A5X3 358 aa3.79□□□□□ -1.8
Ssr3-201ENSMUST00000029414 Camk2n1Q6QWF9 78 aa3.79□□□□□ -1.8
Ssr3-201ENSMUST00000029414 A0A1Y7VJ07 166 aa3.78□□□□□ -1.8
Ssr3-201ENSMUST00000029414 Cox6b2Q80ZN9 88 aa3.78□□□□□ -1.81
Ssr3-201ENSMUST00000029414 Krtap12-1Q9Z287 130 aa3.72□□□□□ -1.81
Ssr3-201ENSMUST00000029414 Krtap7-1Q9D3I6 87 aa3.71□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Gm19426M0QWC7 77 aa3.7□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Gm17606F6ZL36 78 aa3.68□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Gm11564A2A4L9 201 aa3.67□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Gm11595B1AQA7 289 aa3.67□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Krtap4-8B1AQA8 209 aa3.67□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Lce1lQ9D1G7 135 aa3.67□□□□□ -1.82
Ssr3-201ENSMUST00000029414 Gm6358A0A087WPH4 74 aa3.64□□□□□ -1.83
Ssr3-201ENSMUST00000029414 Gm9955Q8CEJ8 102 aa3.63□□□□□ -1.83
Ssr3-201ENSMUST00000029414 Mdn1A2ANY6 5589 aaKnown RBP3.63□□□□□ -1.83
Ssr3-201ENSMUST00000029414 A030014E15RikA0A1Y7VJV2 120 aa3.63□□□□□ -1.83
Ssr3-201ENSMUST00000029414 Krtap19-9aF8WH65 55 aa3.62□□□□□ -1.83
Ssr3-201ENSMUST00000029414 Krtap4-9B1AQA9 244 aa3.55□□□□□ -1.84
Ssr3-201ENSMUST00000029414 BC029722A0A0N4SW31 51 aa3.54□□□□□ -1.84
Ssr3-201ENSMUST00000029414 Lce1iQ9D6P5 149 aa3.5□□□□□ -1.85
Ssr3-201ENSMUST00000029414 Mt4P47945 62 aa3.49□□□□□ -1.85
Ssr3-201ENSMUST00000029414 A030003K21RikA0A1Y7VIM3 128 aa3.48□□□□□ -1.85
Ssr3-201ENSMUST00000029414 Spink7Q6IE32 76 aa3.46□□□□□ -1.86
Ssr3-201ENSMUST00000029414 A0A286YCP9 139 aa3.45□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Krtap9-3Q3V2C1 136 aa3.45□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Lce1a2Q9D1K4 149 aa3.44□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Mt2P02798 61 aa3.43□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms