RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Dync2h1Q45VK7 4306 aa3.87□□□□□ -1.79
Ubr1-201ENSMUST00000028728 SacsQ9JLC8 4582 aa3.84□□□□□ -1.79
Ubr1-201ENSMUST00000028728 Dnah9B1AR51 4484 aa3.83□□□□□ -1.8
Ubr1-201ENSMUST00000028728 BsnO88737 3942 aa3.83□□□□□ -1.8
Ubr1-201ENSMUST00000028728 LorP18165 486 aa3.81□□□□□ -1.8
Ubr1-201ENSMUST00000028728 Dnah8Q91XQ0 4731 aa3.81□□□□□ -1.8
Ubr1-201ENSMUST00000028728 Dync1h1Q9JHU4 4644 aaKnown RBP3.79□□□□□ -1.8
Ubr1-201ENSMUST00000028728 CubnQ9JLB4 3623 aa3.79□□□□□ -1.8
Ubr1-201ENSMUST00000028728 Csmd3Q80T79 3707 aa3.78□□□□□ -1.8
Ubr1-201ENSMUST00000028728 Lrp1bQ9JI18 4599 aa3.78□□□□□ -1.8
Ubr1-201ENSMUST00000028728 Hspg2Q05793 3707 aaKnown RBP3.77□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Xirp2Q4U4S6 3784 aa3.76□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Krtap16-3Q8C1I6 86 aa3.74□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Sprr2kO70562 68 aa3.74□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Gm10100J3QK64 120 aa3.73□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Dnah1E9Q8T7 4250 aa3.73□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Dnah3Q8BW94 4083 aa3.72□□□□□ -1.81
Ubr1-201ENSMUST00000028728 Krtap19-3Q925H6 87 aa3.71□□□□□ -1.82
Ubr1-201ENSMUST00000028728 Dnah7bL7N1Y0 4068 aa3.7□□□□□ -1.82
Ubr1-201ENSMUST00000028728 Fat1A0A1L1SQU7 4645 aa3.69□□□□□ -1.82
Ubr1-201ENSMUST00000028728 Hectd4E9Q2E4 4418 aa3.69□□□□□ -1.82
Ubr1-201ENSMUST00000028728 Krtap19-1Q925H2 87 aa3.67□□□□□ -1.82
Ubr1-201ENSMUST00000028728 Gm10142J3KMP7 120 aa3.66□□□□□ -1.82
Ubr1-201ENSMUST00000028728 TnxbO35452 4006 aa3.65□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Mycbp2Q7TPH6 4711 aa3.65□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Gm18596A0A1W2P860 280 aa3.64□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Gm10272F7CZ33 110 aa3.64□□□□□ -1.83
Ubr1-201ENSMUST00000028728 PrkdcP97313 4128 aa3.64□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Fat3Q8BNA6 4555 aa3.64□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Pkd1O08852 4293 aa3.63□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Lce3bQ9CQM7 98 aa3.62□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Ryr1E9PZQ0 5035 aa3.62□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Sprr2gO70558 76 aa3.61□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Krtap9-5A2A5X3 358 aa3.59□□□□□ -1.83
Ubr1-201ENSMUST00000028728 Lrp1Q91ZX7 4545 aaKnown RBP3.58□□□□□ -1.84
Ubr1-201ENSMUST00000028728 Lce3cQ91V05 98 aa3.55□□□□□ -1.84
Ubr1-201ENSMUST00000028728 Ryr2E9Q401 4966 aaKnown RBP3.51□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Krtap22-2J3QNX6 67 aa3.5□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Fras1Q80T14 4010 aa3.5□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Mt2P02798 61 aa3.49□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Lce3eF8VQJ0 98 aa3.49□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Lce3fQ6PAI4 98 aa3.49□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Kmt2aP55200 3966 aa3.48□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Krtap9-3Q3V2C1 136 aa3.47□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Dnah6E9Q0B6 4144 aa3.47□□□□□ -1.85
Ubr1-201ENSMUST00000028728 Lce3dE9Q8V1 98 aa3.45□□□□□ -1.86
Ubr1-201ENSMUST00000028728 Dnah7aE9Q0T8 4024 aa3.44□□□□□ -1.86
Ubr1-201ENSMUST00000028728 Dnhd1D3Z2X2 4750 aa3.43□□□□□ -1.86
Ubr1-201ENSMUST00000028728 Krtap19-2Q925I0 141 aa3.43□□□□□ -1.86
Ubr1-201ENSMUST00000028728 Krtap19-4Q925H7 84 aa3.42□□□□□ -1.86
Ubr1-201ENSMUST00000028728 Lce1mQ9CR91 182 aa3.41□□□□□ -1.86
Ubr1-201ENSMUST00000028728 Lce3aQ497I5 98 aa3.4□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Lce1jD3YUU5 139 aa3.39□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Ryr3A2AGL3 4863 aa3.38□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Fat2Q5F226 4351 aa3.38□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Vps13bQ80TY5 3993 aa3.37□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Dnah7cA0A087WR13 4024 aa3.36□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Prm1P02319 51 aa3.36□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Herc1E9PZP8 4859 aa3.35□□□□□ -1.87
Ubr1-201ENSMUST00000028728 Kiaa1109A2AAE1 5005 aa3.34□□□□□ -1.88
Ubr1-201ENSMUST00000028728 Herc2Q4U2R1 4836 aa3.29□□□□□ -1.88
Ubr1-201ENSMUST00000028728 HydinQ80W93 5154 aa3.29□□□□□ -1.88
Ubr1-201ENSMUST00000028728 Krtap1-3A2A588 173 aa3.27□□□□□ -1.89
Ubr1-201ENSMUST00000028728 Gm10024A0A0A0MQA4 119 aa3.26□□□□□ -1.89
Ubr1-201ENSMUST00000028728 Lrp2A2ARV4 4660 aa3.26□□□□□ -1.89
Ubr1-201ENSMUST00000028728 Kmt2cQ8BRH4 4903 aa3.26□□□□□ -1.89
Ubr1-201ENSMUST00000028728 Sprr2dO70555 85 aa3.25□□□□□ -1.89
Ubr1-201ENSMUST00000028728 Sprr2fO70557 76 aa3.21□□□□□ -1.89
Ubr1-201ENSMUST00000028728 PcloQ9QYX7 5068 aa3.2□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Syne1Q6ZWR6 8799 aa3.2□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Sprr2hO70559 108 aa3.19□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Sprr2iO70560 76 aa3.18□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Gm7735D3YX18 52 aa3.17□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Pkhd1l1Q80ZA4 4249 aa3.17□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Gm11938Q9D3H4 131 aa3.15□□□□□ -1.9
Ubr1-201ENSMUST00000028728 Lce1iQ9D6P5 149 aa3.14□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Gm9789Q8BIG3 52 aa3.14□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1fB9EJP6 147 aa3.14□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1cQ9D1C5 147 aa3.14□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1lQ9D1G7 135 aa3.14□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1dQ9D731 133 aa3.14□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1eQ9D139 143 aa3.13□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1gQ9D195 139 aa3.13□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1hQ9D6R3 140 aa3.13□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Pkhd1E9PZ36 4059 aa3.1□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Krtap31-1Q9D644 177 aa3.09□□□□□ -1.91
Ubr1-201ENSMUST00000028728 Lce1a2Q9D1K4 149 aa3.09□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Lce1bQ9D149 137 aa3.08□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Birc6O88738 4882 aa3.07□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Gm38119A0A0A6YX29 146 aa3.07□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Gm10061D3Z714 54 aa3.06□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Sprr2eO70556 76 aa3.05□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Gm11562A0PK51 136 aa3.04□□□□□ -1.92
Ubr1-201ENSMUST00000028728 Ubr4A2AN08 5180 aa2.97□□□□□ -1.93
Ubr1-201ENSMUST00000028728 Hmcn2A2AJ76 5100 aa2.95□□□□□ -1.94
Ubr1-201ENSMUST00000028728 Mdn1A2ANY6 5589 aaKnown RBP2.94□□□□□ -1.94
Ubr1-201ENSMUST00000028728 Gm11569B1AQB1 180 aa2.88□□□□□ -1.95
Ubr1-201ENSMUST00000028728 Abca13Q5SSE9 5034 aa2.85□□□□□ -1.95
Ubr1-201ENSMUST00000028728 4932415D10RikA0A1W2P6U8 4986 aa2.84□□□□□ -1.95
Ubr1-201ENSMUST00000028728 Fat4Q2PZL6 4981 aa2.83□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 84.5 ms