RNA–Protein interactions for RNA: ENSMUST00000028234.11

Traf1-201, Transcript of TNF receptor-associated factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Traf1, Length 2,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-201ENSMUST00000028234 Sec61bQ9CQS8 96 aaKnown RBP7.12□□□□□ -1.27
Traf1-201ENSMUST00000028234 2210017I01RikA0A0A6YVV1 95 aa7.12□□□□□ -1.27
Traf1-201ENSMUST00000028234 Gm20537G3UYK7 97 aa7.11□□□□□ -1.27
Traf1-201ENSMUST00000028234 1700042G07RikB1AUF7 90 aa7.1□□□□□ -1.27
Traf1-201ENSMUST00000028234 Herc1E9PZP8 4859 aa7.07□□□□□ -1.28
Traf1-201ENSMUST00000028234 Krtap3-1A2A591 98 aa7.07□□□□□ -1.28
Traf1-201ENSMUST00000028234 Gm18596A0A1W2P860 280 aa7.04□□□□□ -1.28
Traf1-201ENSMUST00000028234 Lrp2A2ARV4 4660 aa7.03□□□□□ -1.28
Traf1-201ENSMUST00000028234 2310057N15RikQ9D6T8 200 aa7.03□□□□□ -1.28
Traf1-201ENSMUST00000028234 Pla2g10Q9QXX3 151 aa7.02□□□□□ -1.29
Traf1-201ENSMUST00000028234 Gm3880A0A1B0GSB3 72 aa6.99□□□□□ -1.29
Traf1-201ENSMUST00000028234 Krtap13-1Q8K198 168 aa6.95□□□□□ -1.3
Traf1-201ENSMUST00000028234 Gm21887J3QQ04 176 aa6.94□□□□□ -1.3
Traf1-201ENSMUST00000028234 BC029722A0A0N4SW31 51 aa6.88□□□□□ -1.31
Traf1-201ENSMUST00000028234 Fam229aB2KGE5 128 aa6.85□□□□□ -1.31
Traf1-201ENSMUST00000028234 Krtap1-5A2A590 122 aa6.81□□□□□ -1.32
Traf1-201ENSMUST00000028234 Ush2AQ2QI47 5193 aa6.76□□□□□ -1.33
Traf1-201ENSMUST00000028234 Gm12216A0A1W2P827 62 aa6.75□□□□□ -1.33
Traf1-201ENSMUST00000028234 Krtap16-3Q8C1I6 86 aa6.74□□□□□ -1.33
Traf1-201ENSMUST00000028234 Crct1Q6PAI5 102 aa6.7□□□□□ -1.34
Traf1-201ENSMUST00000028234 Romo1P60603 79 aa6.67□□□□□ -1.34
Traf1-201ENSMUST00000028234 Ubr4A2AN08 5180 aa6.67□□□□□ -1.34
Traf1-201ENSMUST00000028234 Gm10318A0A1W2P728 225 aa6.66□□□□□ -1.34
Traf1-201ENSMUST00000028234 Krtap19-1Q925H2 87 aa6.66□□□□□ -1.34
Traf1-201ENSMUST00000028234 B930094E09RikQ8C4T2 136 aa6.65□□□□□ -1.34
Traf1-201ENSMUST00000028234 Gm7735D3YX18 52 aa6.65□□□□□ -1.35
Traf1-201ENSMUST00000028234 Prm1P02319 51 aa6.65□□□□□ -1.35
Traf1-201ENSMUST00000028234 Gm19426M0QWC7 77 aa6.63□□□□□ -1.35
Traf1-201ENSMUST00000028234 Gm17402F6Z0L5 76 aa6.62□□□□□ -1.35
Traf1-201ENSMUST00000028234 Gm9789Q8BIG3 52 aa6.62□□□□□ -1.35
Traf1-201ENSMUST00000028234 Krtap19-3Q925H6 87 aa6.62□□□□□ -1.35
Traf1-201ENSMUST00000028234 Hmcn2A2AJ76 5100 aa6.62□□□□□ -1.35
Traf1-201ENSMUST00000028234 Spink7Q6IE32 76 aa6.57□□□□□ -1.36
Traf1-201ENSMUST00000028234 CriptO70333 101 aa6.54□□□□□ -1.36
Traf1-201ENSMUST00000028234 4932415D10RikA0A1W2P6U8 4986 aa6.53□□□□□ -1.36
Traf1-201ENSMUST00000028234 Gm20538F6Z9R1 75 aa6.51□□□□□ -1.37
Traf1-201ENSMUST00000028234 Gm19402J3QJV4 266 aa6.49□□□□□ -1.37
Traf1-201ENSMUST00000028234 Sprr2a3Q4KL71 83 aa6.45□□□□□ -1.38
Traf1-201ENSMUST00000028234 Sprr2a1Q9CQK8 83 aa6.45□□□□□ -1.38
Traf1-201ENSMUST00000028234 Prm2P07978 107 aa6.43□□□□□ -1.38
Traf1-201ENSMUST00000028234 Krtap1-3A2A588 173 aa6.43□□□□□ -1.38
Traf1-201ENSMUST00000028234 Krtap1-4Q3V2D6 188 aa6.42□□□□□ -1.38
Traf1-201ENSMUST00000028234 ZanO88799 5376 aa6.31□□□□□ -1.4
Traf1-201ENSMUST00000028234 LorP18165 486 aa6.3□□□□□ -1.4
Traf1-201ENSMUST00000028234 Mp68P56379 58 aa6.27□□□□□ -1.41
Traf1-201ENSMUST00000028234 Camk2n1Q6QWF9 78 aa6.19□□□□□ -1.42
Traf1-201ENSMUST00000028234 Krtap12-1Q9Z287 130 aa6.16□□□□□ -1.42
Traf1-201ENSMUST00000028234 Lce1jD3YUU5 139 aa6.14□□□□□ -1.43
Traf1-201ENSMUST00000028234 Krtap19-9aF8WH65 55 aa6.14□□□□□ -1.43
Traf1-201ENSMUST00000028234 Fat4Q2PZL6 4981 aa6.14□□□□□ -1.43
Traf1-201ENSMUST00000028234 Rnf213E9Q555 5152 aaKnown RBP6.11□□□□□ -1.43
Traf1-201ENSMUST00000028234 Gm19668J3QMD1 248 aa6.1□□□□□ -1.43
Traf1-201ENSMUST00000028234 Krtap7-1Q9D3I6 87 aa6.06□□□□□ -1.44
Traf1-201ENSMUST00000028234 Gm40193A0A1B0GT39 78 aa6.05□□□□□ -1.44
Traf1-201ENSMUST00000028234 Gm10061D3Z714 54 aa5.89□□□□□ -1.47
Traf1-201ENSMUST00000028234 Krtap19-2Q925I0 141 aa5.89□□□□□ -1.47
Traf1-201ENSMUST00000028234 Krtap17-1A2A5X6 109 aa5.88□□□□□ -1.47
Traf1-201ENSMUST00000028234 SspoQ8CG65 4998 aa5.87□□□□□ -1.47
Traf1-201ENSMUST00000028234 Krtap9-5A2A5X3 358 aa5.86□□□□□ -1.47
Traf1-201ENSMUST00000028234 Lce1iQ9D6P5 149 aa5.77□□□□□ -1.49
Traf1-201ENSMUST00000028234 Gm11569B1AQB1 180 aa5.75□□□□□ -1.49
Traf1-201ENSMUST00000028234 Krtap8-1O08633 61 aa5.73□□□□□ -1.49
Traf1-201ENSMUST00000028234 Tnp1P10856 55 aa5.71□□□□□ -1.5
Traf1-201ENSMUST00000028234 Lce1a2Q9D1K4 149 aa5.71□□□□□ -1.5
Traf1-201ENSMUST00000028234 Krtap19-9bQ99NG9 58 aa5.68□□□□□ -1.5
Traf1-201ENSMUST00000028234 Krtap4-2B1AQ85 167 aa5.57□□□□□ -1.52
Traf1-201ENSMUST00000028234 Ndufaf8A2AMZ4 74 aa5.56□□□□□ -1.52
Traf1-201ENSMUST00000028234 Gm6358A0A087WPH4 74 aa5.54□□□□□ -1.52
Traf1-201ENSMUST00000028234 Gm11562A0PK51 136 aa5.54□□□□□ -1.52
Traf1-201ENSMUST00000028234 Gm9112A2AI92 75 aa5.51□□□□□ -1.53
Traf1-201ENSMUST00000028234 Lce1gQ9D195 139 aa5.49□□□□□ -1.53
Traf1-201ENSMUST00000028234 Mt2P02798 61 aa5.49□□□□□ -1.53
Traf1-201ENSMUST00000028234 Muc5bE9Q5I3 4800 aa5.49□□□□□ -1.53
Traf1-201ENSMUST00000028234 Syne2Q6ZWQ0 6874 aaKnown RBP5.44□□□□□ -1.54
Traf1-201ENSMUST00000028234 Gm11555B1AQ89 175 aa5.36□□□□□ -1.55
Traf1-201ENSMUST00000028234 2310046K23RikA0A0A6YVW6 87 aa5.36□□□□□ -1.55
Traf1-201ENSMUST00000028234 Mdn1A2ANY6 5589 aaKnown RBP5.32□□□□□ -1.56
Traf1-201ENSMUST00000028234 Krtap9-3Q3V2C1 136 aa5.32□□□□□ -1.56
Traf1-201ENSMUST00000028234 Gm11596B1AQB0 205 aa5.31□□□□□ -1.56
Traf1-201ENSMUST00000028234 Krtap4-6Q3V4B7 195 aa5.31□□□□□ -1.56
Traf1-201ENSMUST00000028234 Lce1hQ9D6R3 140 aa5.28□□□□□ -1.56
Traf1-201ENSMUST00000028234 Krtap4-1Q3UUY3 169 aa5.2□□□□□ -1.58
Traf1-201ENSMUST00000028234 Krtap22-2J3QNX6 67 aa5.19□□□□□ -1.58
Traf1-201ENSMUST00000028234 Gm11564A2A4L9 201 aa5.07□□□□□ -1.6
Traf1-201ENSMUST00000028234 Gm11563B1AQ90 168 aa5.07□□□□□ -1.6
Traf1-201ENSMUST00000028234 Gm11595B1AQA7 289 aa5.07□□□□□ -1.6
Traf1-201ENSMUST00000028234 Krtap4-8B1AQA8 209 aa5.07□□□□□ -1.6
Traf1-201ENSMUST00000028234 Gm10272F7CZ33 110 aa4.93□□□□□ -1.62
Traf1-201ENSMUST00000028234 Fsip2A2ARZ3 6995 aa4.93□□□□□ -1.62
Traf1-201ENSMUST00000028234 Krtap4-9B1AQA9 244 aa4.93□□□□□ -1.62
Traf1-201ENSMUST00000028234 Mt4P47945 62 aa4.87□□□□□ -1.63
Traf1-201ENSMUST00000028234 Sprr2gO70558 76 aa4.81□□□□□ -1.64
Traf1-201ENSMUST00000028234 Lce1dQ9D731 133 aa4.77□□□□□ -1.65
Traf1-201ENSMUST00000028234 Krtap4-13Q9D7P3 165 aa4.76□□□□□ -1.65
Traf1-201ENSMUST00000028234 Sprr2dO70555 85 aa4.74□□□□□ -1.65
Traf1-201ENSMUST00000028234 Gm11938Q9D3H4 131 aa4.73□□□□□ -1.65
Traf1-201ENSMUST00000028234 4933428G20RikQ9D3X4 101 aa4.71□□□□□ -1.66
Traf1-201ENSMUST00000028234 Krtap31-1Q9D644 177 aa4.71□□□□□ -1.66
Traf1-201ENSMUST00000028234 Lce1bQ9D149 137 aa4.66□□□□□ -1.66
Traf1-201ENSMUST00000028234 Gm38119A0A0A6YX29 146 aa4.64□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms