RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Krtap13-1Q8K198 168 aa3.91□□□□□ -1.78
Trub1-201ENSMUST00000026072 Dnah5Q8VHE6 4621 aa3.9□□□□□ -1.78
Trub1-201ENSMUST00000026072 Gm17402F6Z0L5 76 aa3.89□□□□□ -1.79
Trub1-201ENSMUST00000026072 Dnah2P0C6F1 4456 aa3.89□□□□□ -1.79
Trub1-201ENSMUST00000026072 PlecQ9QXS1 4691 aaKnown RBP3.88□□□□□ -1.79
Trub1-201ENSMUST00000026072 A0A1Y7VLE6 161 aa3.87□□□□□ -1.79
Trub1-201ENSMUST00000026072 Ryr3A2AGL3 4863 aa3.85□□□□□ -1.79
Trub1-201ENSMUST00000026072 Gm19668J3QMD1 248 aa3.84□□□□□ -1.79
Trub1-201ENSMUST00000026072 Stard9Q80TF6 4561 aa3.81□□□□□ -1.8
Trub1-201ENSMUST00000026072 Krtap3-1A2A591 98 aa3.79□□□□□ -1.8
Trub1-201ENSMUST00000026072 Krtap4-1Q3UUY3 169 aa3.78□□□□□ -1.8
Trub1-201ENSMUST00000026072 ApobE9Q414 4505 aa3.77□□□□□ -1.81
Trub1-201ENSMUST00000026072 Lrp1bQ9JI18 4599 aa3.74□□□□□ -1.81
Trub1-201ENSMUST00000026072 Fat2Q5F226 4351 aa3.72□□□□□ -1.81
Trub1-201ENSMUST00000026072 Pkhd1l1Q80ZA4 4249 aa3.69□□□□□ -1.82
Trub1-201ENSMUST00000026072 Mycbp2Q7TPH6 4711 aa3.68□□□□□ -1.82
Trub1-201ENSMUST00000026072 4933428G20RikQ9D3X4 101 aa3.68□□□□□ -1.82
Trub1-201ENSMUST00000026072 HydinQ80W93 5154 aa3.66□□□□□ -1.82
Trub1-201ENSMUST00000026072 Ryr2E9Q401 4966 aaKnown RBP3.64□□□□□ -1.83
Trub1-201ENSMUST00000026072 Lrp1Q91ZX7 4545 aaKnown RBP3.64□□□□□ -1.83
Trub1-201ENSMUST00000026072 Herc2Q4U2R1 4836 aa3.62□□□□□ -1.83
Trub1-201ENSMUST00000026072 Gm18596A0A1W2P860 280 aa3.62□□□□□ -1.83
Trub1-201ENSMUST00000026072 Dync1h1Q9JHU4 4644 aaKnown RBP3.62□□□□□ -1.83
Trub1-201ENSMUST00000026072 Gm6358A0A087WPH4 74 aa3.61□□□□□ -1.83
Trub1-201ENSMUST00000026072 Fat3Q8BNA6 4555 aa3.6□□□□□ -1.83
Trub1-201ENSMUST00000026072 SacsQ9JLC8 4582 aa3.6□□□□□ -1.83
Trub1-201ENSMUST00000026072 Kiaa1109A2AAE1 5005 aa3.59□□□□□ -1.83
Trub1-201ENSMUST00000026072 PcloQ9QYX7 5068 aa3.57□□□□□ -1.84
Trub1-201ENSMUST00000026072 LorP18165 486 aa3.54□□□□□ -1.84
Trub1-201ENSMUST00000026072 Lce1mQ9CR91 182 aa3.53□□□□□ -1.84
Trub1-201ENSMUST00000026072 Gm11563B1AQ90 168 aa3.52□□□□□ -1.85
Trub1-201ENSMUST00000026072 Krtap4-7Q9D732 168 aa3.52□□□□□ -1.85
Trub1-201ENSMUST00000026072 Lrp2A2ARV4 4660 aa3.52□□□□□ -1.85
Trub1-201ENSMUST00000026072 Fat1A0A1L1SQU7 4645 aa3.51□□□□□ -1.85
Trub1-201ENSMUST00000026072 Gm7544A0A1Y7VJ58 118 aa3.5□□□□□ -1.85
Trub1-201ENSMUST00000026072 Sprr2a3Q4KL71 83 aa3.49□□□□□ -1.85
Trub1-201ENSMUST00000026072 Sprr2a1Q9CQK8 83 aa3.49□□□□□ -1.85
Trub1-201ENSMUST00000026072 Birc6O88738 4882 aa3.49□□□□□ -1.85
Trub1-201ENSMUST00000026072 Herc1E9PZP8 4859 aa3.49□□□□□ -1.85
Trub1-201ENSMUST00000026072 Krtap1-5A2A590 122 aa3.49□□□□□ -1.85
Trub1-201ENSMUST00000026072 Krtap7-1Q9D3I6 87 aa3.48□□□□□ -1.85
Trub1-201ENSMUST00000026072 Krtap19-9aF8WH65 55 aa3.46□□□□□ -1.86
Trub1-201ENSMUST00000026072 Gm11555B1AQ89 175 aa3.46□□□□□ -1.86
Trub1-201ENSMUST00000026072 Krtap1-4Q3V2D6 188 aa3.45□□□□□ -1.86
Trub1-201ENSMUST00000026072 Gm19402J3QJV4 266 aa3.44□□□□□ -1.86
Trub1-201ENSMUST00000026072 A0A1Y7VJH8 109 aa3.44□□□□□ -1.86
Trub1-201ENSMUST00000026072 Krtap8-1O08633 61 aa3.42□□□□□ -1.86
Trub1-201ENSMUST00000026072 Abca13Q5SSE9 5034 aa3.42□□□□□ -1.86
Trub1-201ENSMUST00000026072 Kmt2cQ8BRH4 4903 aa3.42□□□□□ -1.86
Trub1-201ENSMUST00000026072 A030003K21RikA0A1Y7VIM3 128 aa3.39□□□□□ -1.87
Trub1-201ENSMUST00000026072 Gm6217A0A1Y7VJK9 128 aa3.39□□□□□ -1.87
Trub1-201ENSMUST00000026072 Dnhd1D3Z2X2 4750 aa3.38□□□□□ -1.87
Trub1-201ENSMUST00000026072 Dnah8Q91XQ0 4731 aa3.38□□□□□ -1.87
Trub1-201ENSMUST00000026072 Syne1Q6ZWR6 8799 aa3.37□□□□□ -1.87
Trub1-201ENSMUST00000026072 Krtap12-1Q9Z287 130 aa3.37□□□□□ -1.87
Trub1-201ENSMUST00000026072 Sprr2kO70562 68 aa3.36□□□□□ -1.87
Trub1-201ENSMUST00000026072 Krtap19-9bQ99NG9 58 aa3.35□□□□□ -1.87
Trub1-201ENSMUST00000026072 Krtap28-10A0A1Y7VP58 119 aa3.35□□□□□ -1.87
Trub1-201ENSMUST00000026072 Krtap16-3Q8C1I6 86 aa3.33□□□□□ -1.88
Trub1-201ENSMUST00000026072 A030005L19RikA0A1Y7VIU2 113 aa3.32□□□□□ -1.88
Trub1-201ENSMUST00000026072 Krtap19-3Q925H6 87 aa3.29□□□□□ -1.88
Trub1-201ENSMUST00000026072 Mdn1A2ANY6 5589 aaKnown RBP3.28□□□□□ -1.88
Trub1-201ENSMUST00000026072 4932415D10RikA0A1W2P6U8 4986 aa3.27□□□□□ -1.89
Trub1-201ENSMUST00000026072 Ubr4A2AN08 5180 aa3.25□□□□□ -1.89
Trub1-201ENSMUST00000026072 Krtap19-1Q925H2 87 aa3.25□□□□□ -1.89
Trub1-201ENSMUST00000026072 Ush2AQ2QI47 5193 aa3.21□□□□□ -1.89
Trub1-201ENSMUST00000026072 Krtap31-2Q8CAY5 177 aa3.21□□□□□ -1.9
Trub1-201ENSMUST00000026072 Gm7735D3YX18 52 aa3.2□□□□□ -1.9
Trub1-201ENSMUST00000026072 A030005K14RikA0A1Y7VNY1 122 aa3.2□□□□□ -1.9
Trub1-201ENSMUST00000026072 Krtap17-1A2A5X6 109 aa3.2□□□□□ -1.9
Trub1-201ENSMUST00000026072 Krtap4-2B1AQ85 167 aa3.2□□□□□ -1.9
Trub1-201ENSMUST00000026072 Prm1P02319 51 aa3.18□□□□□ -1.9
Trub1-201ENSMUST00000026072 Muc16A0A140LJ72 8478 aa3.16□□□□□ -1.9
Trub1-201ENSMUST00000026072 Krtap9-5A2A5X3 358 aa3.16□□□□□ -1.9
Trub1-201ENSMUST00000026072 Sprr2gO70558 76 aa3.13□□□□□ -1.91
Trub1-201ENSMUST00000026072 Gm9789Q8BIG3 52 aa3.11□□□□□ -1.91
Trub1-201ENSMUST00000026072 Krtap1-3A2A588 173 aa3.1□□□□□ -1.91
Trub1-201ENSMUST00000026072 Lce1jD3YUU5 139 aa3.09□□□□□ -1.91
Trub1-201ENSMUST00000026072 Krtap28-13A0A087WQP5 138 aa3.09□□□□□ -1.91
Trub1-201ENSMUST00000026072 Hmcn2A2AJ76 5100 aa3.08□□□□□ -1.92
Trub1-201ENSMUST00000026072 Gm10100J3QK64 120 aa3.07□□□□□ -1.92
Trub1-201ENSMUST00000026072 Gm10272F7CZ33 110 aa3.06□□□□□ -1.92
Trub1-201ENSMUST00000026072 Lce3cQ91V05 98 aa3.06□□□□□ -1.92
Trub1-201ENSMUST00000026072 Lce3bQ9CQM7 98 aa3.05□□□□□ -1.92
Trub1-201ENSMUST00000026072 Krtap31-1Q9D644 177 aa3.05□□□□□ -1.92
Trub1-201ENSMUST00000026072 Mt2P02798 61 aa3.01□□□□□ -1.93
Trub1-201ENSMUST00000026072 A0A1Y7VJ07 166 aa3.01□□□□□ -1.93
Trub1-201ENSMUST00000026072 Krtap19-2Q925I0 141 aa3□□□□□ -1.93
Trub1-201ENSMUST00000026072 Krtap22-2J3QNX6 67 aa2.99□□□□□ -1.93
Trub1-201ENSMUST00000026072 Rnf213E9Q555 5152 aaKnown RBP2.97□□□□□ -1.93
Trub1-201ENSMUST00000026072 ZanO88799 5376 aa2.96□□□□□ -1.94
Trub1-201ENSMUST00000026072 Gm38119A0A0A6YX29 146 aa2.95□□□□□ -1.94
Trub1-201ENSMUST00000026072 Lce3eF8VQJ0 98 aa2.95□□□□□ -1.94
Trub1-201ENSMUST00000026072 Lce3fQ6PAI4 98 aa2.95□□□□□ -1.94
Trub1-201ENSMUST00000026072 Fat4Q2PZL6 4981 aa2.95□□□□□ -1.94
Trub1-201ENSMUST00000026072 Gm10142J3KMP7 120 aa2.95□□□□□ -1.94
Trub1-201ENSMUST00000026072 2310046K23RikA0A0A6YVW6 87 aa2.92□□□□□ -1.94
Trub1-201ENSMUST00000026072 Gm11569B1AQB1 180 aa2.87□□□□□ -1.95
Trub1-201ENSMUST00000026072 Gm10061D3Z714 54 aa2.86□□□□□ -1.95
Trub1-201ENSMUST00000026072 Lce3dE9Q8V1 98 aa2.86□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms