RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Gm10382Q3V0T5 144 aa6.13□□□□□ -1.43
Trim35-201ENSMUST00000022623 Kiaa1109A2AAE1 5005 aa6.12□□□□□ -1.43
Trim35-201ENSMUST00000022623 Abca13Q5SSE9 5034 aa6.1□□□□□ -1.43
Trim35-201ENSMUST00000022623 Pkhd1E9PZ36 4059 aa6.09□□□□□ -1.43
Trim35-201ENSMUST00000022623 Herc2Q4U2R1 4836 aa6.08□□□□□ -1.44
Trim35-201ENSMUST00000022623 HydinQ80W93 5154 aa6.06□□□□□ -1.44
Trim35-201ENSMUST00000022623 Pkhd1l1Q80ZA4 4249 aa6.04□□□□□ -1.44
Trim35-201ENSMUST00000022623 Kmt2cQ8BRH4 4903 aa6.04□□□□□ -1.44
Trim35-201ENSMUST00000022623 Gm9955Q8CEJ8 102 aa6.03□□□□□ -1.44
Trim35-201ENSMUST00000022623 Lrp2A2ARV4 4660 aa6.01□□□□□ -1.45
Trim35-201ENSMUST00000022623 Gm10318A0A1W2P728 225 aa5.97□□□□□ -1.45
Trim35-201ENSMUST00000022623 Dnah8Q91XQ0 4731 aa5.96□□□□□ -1.46
Trim35-201ENSMUST00000022623 Crct1Q6PAI5 102 aa5.9□□□□□ -1.46
Trim35-201ENSMUST00000022623 Gm17416Q30KP4 66 aa5.89□□□□□ -1.47
Trim35-201ENSMUST00000022623 Fam229aB2KGE5 128 aa5.88□□□□□ -1.47
Trim35-201ENSMUST00000022623 Spink7Q6IE32 76 aa5.87□□□□□ -1.47
Trim35-201ENSMUST00000022623 BC029722A0A0N4SW31 51 aa5.86□□□□□ -1.47
Trim35-201ENSMUST00000022623 B930094E09RikQ8C4T2 136 aa5.81□□□□□ -1.48
Trim35-201ENSMUST00000022623 2210017I01RikA0A0A6YVV1 95 aa5.8□□□□□ -1.48
Trim35-201ENSMUST00000022623 Dnhd1D3Z2X2 4750 aa5.79□□□□□ -1.48
Trim35-201ENSMUST00000022623 Camk2n1Q6QWF9 78 aa5.78□□□□□ -1.48
Trim35-201ENSMUST00000022623 Krtap13-1Q8K198 168 aa5.77□□□□□ -1.49
Trim35-201ENSMUST00000022623 PcloQ9QYX7 5068 aa5.76□□□□□ -1.49
Trim35-201ENSMUST00000022623 Krtap3-1A2A591 98 aa5.76□□□□□ -1.49
Trim35-201ENSMUST00000022623 Gm19426M0QWC7 77 aa5.75□□□□□ -1.49
Trim35-201ENSMUST00000022623 Birc6O88738 4882 aa5.7□□□□□ -1.5
Trim35-201ENSMUST00000022623 Krtap7-1Q9D3I6 87 aa5.66□□□□□ -1.5
Trim35-201ENSMUST00000022623 Gm40193A0A1B0GT39 78 aa5.63□□□□□ -1.51
Trim35-201ENSMUST00000022623 Herc1E9PZP8 4859 aa5.61□□□□□ -1.51
Trim35-201ENSMUST00000022623 Gm19668J3QMD1 248 aa5.54□□□□□ -1.52
Trim35-201ENSMUST00000022623 Lce1mQ9CR91 182 aa5.48□□□□□ -1.53
Trim35-201ENSMUST00000022623 Gm18596A0A1W2P860 280 aa5.47□□□□□ -1.53
Trim35-201ENSMUST00000022623 Krtap16-3Q8C1I6 86 aa5.46□□□□□ -1.54
Trim35-201ENSMUST00000022623 Krtap1-5A2A590 122 aa5.45□□□□□ -1.54
Trim35-201ENSMUST00000022623 Ubr4A2AN08 5180 aa5.43□□□□□ -1.54
Trim35-201ENSMUST00000022623 LorP18165 486 aa5.41□□□□□ -1.54
Trim35-201ENSMUST00000022623 Krtap19-3Q925H6 87 aa5.37□□□□□ -1.55
Trim35-201ENSMUST00000022623 Krtap19-1Q925H2 87 aa5.36□□□□□ -1.55
Trim35-201ENSMUST00000022623 Gm19402J3QJV4 266 aa5.35□□□□□ -1.55
Trim35-201ENSMUST00000022623 Gm17402F6Z0L5 76 aa5.28□□□□□ -1.56
Trim35-201ENSMUST00000022623 Ush2AQ2QI47 5193 aa5.28□□□□□ -1.56
Trim35-201ENSMUST00000022623 ZanO88799 5376 aa5.25□□□□□ -1.57
Trim35-201ENSMUST00000022623 Fat4Q2PZL6 4981 aa5.24□□□□□ -1.57
Trim35-201ENSMUST00000022623 Krtap1-4Q3V2D6 188 aa5.24□□□□□ -1.57
Trim35-201ENSMUST00000022623 Krtap1-3A2A588 173 aa5.21□□□□□ -1.58
Trim35-201ENSMUST00000022623 4932415D10RikA0A1W2P6U8 4986 aa5.2□□□□□ -1.58
Trim35-201ENSMUST00000022623 Sprr2a3Q4KL71 83 aa5.2□□□□□ -1.58
Trim35-201ENSMUST00000022623 Sprr2a1Q9CQK8 83 aa5.2□□□□□ -1.58
Trim35-201ENSMUST00000022623 Hmcn2A2AJ76 5100 aa5.12□□□□□ -1.59
Trim35-201ENSMUST00000022623 Krtap12-1Q9Z287 130 aa5.08□□□□□ -1.6
Trim35-201ENSMUST00000022623 Gm9789Q8BIG3 52 aa5.08□□□□□ -1.6
Trim35-201ENSMUST00000022623 Lce1jD3YUU5 139 aa5.06□□□□□ -1.6
Trim35-201ENSMUST00000022623 Gm7735D3YX18 52 aa5.06□□□□□ -1.6
Trim35-201ENSMUST00000022623 Rnf213E9Q555 5152 aaKnown RBP5.06□□□□□ -1.6
Trim35-201ENSMUST00000022623 Prm1P02319 51 aa5.05□□□□□ -1.6
Trim35-201ENSMUST00000022623 Krtap19-9aF8WH65 55 aa5.04□□□□□ -1.6
Trim35-201ENSMUST00000022623 Krtap17-1A2A5X6 109 aa4.91□□□□□ -1.62
Trim35-201ENSMUST00000022623 Tnp1P10856 55 aa4.9□□□□□ -1.62
Trim35-201ENSMUST00000022623 Krtap9-5A2A5X3 358 aa4.9□□□□□ -1.63
Trim35-201ENSMUST00000022623 A0A1Y7VJH8 109 aa4.86□□□□□ -1.63
Trim35-201ENSMUST00000022623 Krtap19-2Q925I0 141 aa4.82□□□□□ -1.64
Trim35-201ENSMUST00000022623 Krtap31-1Q9D644 177 aa4.82□□□□□ -1.64
Trim35-201ENSMUST00000022623 Mdn1A2ANY6 5589 aaKnown RBP4.76□□□□□ -1.65
Trim35-201ENSMUST00000022623 Krtap28-10A0A1Y7VP58 119 aa4.75□□□□□ -1.65
Trim35-201ENSMUST00000022623 Gm10061D3Z714 54 aa4.7□□□□□ -1.66
Trim35-201ENSMUST00000022623 Lce1iQ9D6P5 149 aa4.69□□□□□ -1.66
Trim35-201ENSMUST00000022623 Krtap19-9bQ99NG9 58 aa4.67□□□□□ -1.66
Trim35-201ENSMUST00000022623 Lce1a2Q9D1K4 149 aa4.65□□□□□ -1.67
Trim35-201ENSMUST00000022623 A0A1Y7VLE6 161 aa4.59□□□□□ -1.67
Trim35-201ENSMUST00000022623 Krtap8-1O08633 61 aa4.59□□□□□ -1.67
Trim35-201ENSMUST00000022623 Mt2P02798 61 aa4.58□□□□□ -1.68
Trim35-201ENSMUST00000022623 A030005L19RikA0A1Y7VIU2 113 aa4.54□□□□□ -1.68
Trim35-201ENSMUST00000022623 Gm6358A0A087WPH4 74 aa4.53□□□□□ -1.68
Trim35-201ENSMUST00000022623 SspoQ8CG65 4998 aa4.51□□□□□ -1.69
Trim35-201ENSMUST00000022623 Gm11569B1AQB1 180 aa4.5□□□□□ -1.69
Trim35-201ENSMUST00000022623 Gm7544A0A1Y7VJ58 118 aa4.5□□□□□ -1.69
Trim35-201ENSMUST00000022623 Krtap31-2Q8CAY5 177 aa4.49□□□□□ -1.69
Trim35-201ENSMUST00000022623 Krtap9-3Q3V2C1 136 aa4.43□□□□□ -1.7
Trim35-201ENSMUST00000022623 2310046K23RikA0A0A6YVW6 87 aa4.39□□□□□ -1.71
Trim35-201ENSMUST00000022623 Krtap28-13A0A087WQP5 138 aa4.38□□□□□ -1.71
Trim35-201ENSMUST00000022623 A030005K14RikA0A1Y7VNY1 122 aa4.38□□□□□ -1.71
Trim35-201ENSMUST00000022623 Muc5bE9Q5I3 4800 aa4.38□□□□□ -1.71
Trim35-201ENSMUST00000022623 Lce1hQ9D6R3 140 aa4.34□□□□□ -1.71
Trim35-201ENSMUST00000022623 Krtap22-2J3QNX6 67 aa4.33□□□□□ -1.72
Trim35-201ENSMUST00000022623 4933428G20RikQ9D3X4 101 aa4.26□□□□□ -1.73
Trim35-201ENSMUST00000022623 Gm10272F7CZ33 110 aa4.24□□□□□ -1.73
Trim35-201ENSMUST00000022623 Krtap4-6Q3V4B7 195 aa4.21□□□□□ -1.74
Trim35-201ENSMUST00000022623 Fsip2A2ARZ3 6995 aa4.2□□□□□ -1.74
Trim35-201ENSMUST00000022623 Krtap4-2B1AQ85 167 aa4.11□□□□□ -1.75
Trim35-201ENSMUST00000022623 Gm38119A0A0A6YX29 146 aa4.08□□□□□ -1.76
Trim35-201ENSMUST00000022623 Krtap4-1Q3UUY3 169 aa4.07□□□□□ -1.76
Trim35-201ENSMUST00000022623 Lce1gQ9D195 139 aa4.06□□□□□ -1.76
Trim35-201ENSMUST00000022623 Sprr2kO70562 68 aa4.04□□□□□ -1.76
Trim35-201ENSMUST00000022623 Mt4P47945 62 aa4.02□□□□□ -1.77
Trim35-201ENSMUST00000022623 Muc16A0A140LJ72 8478 aa3.99□□□□□ -1.77
Trim35-201ENSMUST00000022623 A030003K21RikA0A1Y7VIM3 128 aa3.98□□□□□ -1.77
Trim35-201ENSMUST00000022623 Gm6217A0A1Y7VJK9 128 aa3.98□□□□□ -1.77
Trim35-201ENSMUST00000022623 Syne2Q6ZWQ0 6874 aaKnown RBP3.98□□□□□ -1.77
Trim35-201ENSMUST00000022623 Gm11596B1AQB0 205 aa3.97□□□□□ -1.77
Trim35-201ENSMUST00000022623 Lce1dQ9D731 133 aa3.97□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms