RNA–Protein interactions for RNA: ENSMUST00000019991.7

Tube1-201, Transcript of Tubulin epsilon chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tube1, Length 2,929 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1-201ENSMUST00000019991 Krtap19-5O08632 62 aa5.52□□□□□ -1.53
Tube1-201ENSMUST00000019991 Ndufaf8A2AMZ4 74 aa5.51□□□□□ -1.53
Tube1-201ENSMUST00000019991 Gm19426M0QWC7 77 aa5.5□□□□□ -1.53
Tube1-201ENSMUST00000019991 Ryr1E9PZQ0 5035 aa5.49□□□□□ -1.53
Tube1-201ENSMUST00000019991 Dnah8Q91XQ0 4731 aa5.48□□□□□ -1.53
Tube1-201ENSMUST00000019991 Prm2P07978 107 aa5.47□□□□□ -1.53
Tube1-201ENSMUST00000019991 B930094E09RikQ8C4T2 136 aa5.42□□□□□ -1.54
Tube1-201ENSMUST00000019991 2310057N15RikQ9D6T8 200 aa5.42□□□□□ -1.54
Tube1-201ENSMUST00000019991 HydinQ80W93 5154 aa5.4□□□□□ -1.55
Tube1-201ENSMUST00000019991 Gm17416Q30KP4 66 aa5.39□□□□□ -1.55
Tube1-201ENSMUST00000019991 Gm10318A0A1W2P728 225 aa5.37□□□□□ -1.55
Tube1-201ENSMUST00000019991 Lrp2A2ARV4 4660 aa5.37□□□□□ -1.55
Tube1-201ENSMUST00000019991 2210017I01RikA0A0A6YVV1 95 aa5.36□□□□□ -1.55
Tube1-201ENSMUST00000019991 Gm19668J3QMD1 248 aa5.36□□□□□ -1.55
Tube1-201ENSMUST00000019991 Krtap7-1Q9D3I6 87 aa5.35□□□□□ -1.55
Tube1-201ENSMUST00000019991 Gm19402J3QJV4 266 aa5.34□□□□□ -1.55
Tube1-201ENSMUST00000019991 BC029722A0A0N4SW31 51 aa5.3□□□□□ -1.56
Tube1-201ENSMUST00000019991 Kiaa1109A2AAE1 5005 aa5.3□□□□□ -1.56
Tube1-201ENSMUST00000019991 Krtap13-1Q8K198 168 aa5.29□□□□□ -1.56
Tube1-201ENSMUST00000019991 PcloQ9QYX7 5068 aa5.26□□□□□ -1.57
Tube1-201ENSMUST00000019991 Birc6O88738 4882 aa5.24□□□□□ -1.57
Tube1-201ENSMUST00000019991 Crct1Q6PAI5 102 aa5.22□□□□□ -1.57
Tube1-201ENSMUST00000019991 Herc2Q4U2R1 4836 aa5.21□□□□□ -1.58
Tube1-201ENSMUST00000019991 Dnhd1D3Z2X2 4750 aa5.21□□□□□ -1.58
Tube1-201ENSMUST00000019991 Fam229aB2KGE5 128 aa5.18□□□□□ -1.58
Tube1-201ENSMUST00000019991 Krtap4-1Q3UUY3 169 aa5.18□□□□□ -1.58
Tube1-201ENSMUST00000019991 Spink7Q6IE32 76 aa5.16□□□□□ -1.58
Tube1-201ENSMUST00000019991 Lce1mQ9CR91 182 aa5.13□□□□□ -1.59
Tube1-201ENSMUST00000019991 Gm17402F6Z0L5 76 aa5.03□□□□□ -1.6
Tube1-201ENSMUST00000019991 Krtap1-5A2A590 122 aa5.03□□□□□ -1.6
Tube1-201ENSMUST00000019991 Gm40193A0A1B0GT39 78 aa5.02□□□□□ -1.61
Tube1-201ENSMUST00000019991 Gm9112A2AI92 75 aa5.02□□□□□ -1.61
Tube1-201ENSMUST00000019991 Sprr2a3Q4KL71 83 aa5.02□□□□□ -1.61
Tube1-201ENSMUST00000019991 Sprr2a1Q9CQK8 83 aa5.02□□□□□ -1.61
Tube1-201ENSMUST00000019991 Ubr4A2AN08 5180 aa5.02□□□□□ -1.61
Tube1-201ENSMUST00000019991 Gm18596A0A1W2P860 280 aa4.97□□□□□ -1.61
Tube1-201ENSMUST00000019991 Camk2n1Q6QWF9 78 aa4.95□□□□□ -1.62
Tube1-201ENSMUST00000019991 Herc1E9PZP8 4859 aa4.95□□□□□ -1.62
Tube1-201ENSMUST00000019991 Sec61bQ9CQS8 96 aaKnown RBP4.94□□□□□ -1.62
Tube1-201ENSMUST00000019991 Krtap16-3Q8C1I6 86 aa4.92□□□□□ -1.62
Tube1-201ENSMUST00000019991 Fat4Q2PZL6 4981 aa4.91□□□□□ -1.62
Tube1-201ENSMUST00000019991 ZanO88799 5376 aa4.82□□□□□ -1.64
Tube1-201ENSMUST00000019991 Gm11563B1AQ90 168 aa4.81□□□□□ -1.64
Tube1-201ENSMUST00000019991 Krtap4-7Q9D732 168 aa4.81□□□□□ -1.64
Tube1-201ENSMUST00000019991 A0A1Y7VJH8 109 aa4.79□□□□□ -1.64
Tube1-201ENSMUST00000019991 Krtap19-1Q925H2 87 aa4.79□□□□□ -1.64
Tube1-201ENSMUST00000019991 Gm11555B1AQ89 175 aa4.78□□□□□ -1.64
Tube1-201ENSMUST00000019991 Krtap19-3Q925H6 87 aa4.78□□□□□ -1.64
Tube1-201ENSMUST00000019991 Prm1P02319 51 aa4.77□□□□□ -1.65
Tube1-201ENSMUST00000019991 Krtap1-4Q3V2D6 188 aa4.76□□□□□ -1.65
Tube1-201ENSMUST00000019991 Gm7735D3YX18 52 aa4.72□□□□□ -1.65
Tube1-201ENSMUST00000019991 4932415D10RikA0A1W2P6U8 4986 aa4.71□□□□□ -1.66
Tube1-201ENSMUST00000019991 Lce1jD3YUU5 139 aa4.67□□□□□ -1.66
Tube1-201ENSMUST00000019991 Ush2AQ2QI47 5193 aa4.67□□□□□ -1.66
Tube1-201ENSMUST00000019991 Gm9789Q8BIG3 52 aa4.66□□□□□ -1.66
Tube1-201ENSMUST00000019991 Hmcn2A2AJ76 5100 aa4.66□□□□□ -1.66
Tube1-201ENSMUST00000019991 Rnf213E9Q555 5152 aaKnown RBP4.66□□□□□ -1.66
Tube1-201ENSMUST00000019991 Tnp1P10856 55 aa4.64□□□□□ -1.67
Tube1-201ENSMUST00000019991 Krtap28-10A0A1Y7VP58 119 aa4.62□□□□□ -1.67
Tube1-201ENSMUST00000019991 Krtap17-1A2A5X6 109 aa4.6□□□□□ -1.67
Tube1-201ENSMUST00000019991 LorP18165 486 aa4.54□□□□□ -1.68
Tube1-201ENSMUST00000019991 Krtap12-1Q9Z287 130 aa4.5□□□□□ -1.69
Tube1-201ENSMUST00000019991 Krtap19-9aF8WH65 55 aa4.47□□□□□ -1.69
Tube1-201ENSMUST00000019991 Gm7544A0A1Y7VJ58 118 aa4.45□□□□□ -1.7
Tube1-201ENSMUST00000019991 Krtap1-3A2A588 173 aa4.43□□□□□ -1.7
Tube1-201ENSMUST00000019991 A0A1Y7VLE6 161 aa4.41□□□□□ -1.7
Tube1-201ENSMUST00000019991 A030005L19RikA0A1Y7VIU2 113 aa4.41□□□□□ -1.7
Tube1-201ENSMUST00000019991 Krtap9-3Q3V2C1 136 aa4.41□□□□□ -1.7
Tube1-201ENSMUST00000019991 Lce1iQ9D6P5 149 aa4.35□□□□□ -1.71
Tube1-201ENSMUST00000019991 Lce1a2Q9D1K4 149 aa4.35□□□□□ -1.71
Tube1-201ENSMUST00000019991 Krtap8-1O08633 61 aa4.34□□□□□ -1.71
Tube1-201ENSMUST00000019991 2310046K23RikA0A0A6YVW6 87 aa4.32□□□□□ -1.72
Tube1-201ENSMUST00000019991 Krtap4-2B1AQ85 167 aa4.32□□□□□ -1.72
Tube1-201ENSMUST00000019991 Lce1hQ9D6R3 140 aa4.3□□□□□ -1.72
Tube1-201ENSMUST00000019991 Krtap19-9bQ99NG9 58 aa4.28□□□□□ -1.72
Tube1-201ENSMUST00000019991 Gm11562A0PK51 136 aa4.28□□□□□ -1.72
Tube1-201ENSMUST00000019991 A030005K14RikA0A1Y7VNY1 122 aa4.26□□□□□ -1.73
Tube1-201ENSMUST00000019991 Krtap28-13A0A087WQP5 138 aa4.26□□□□□ -1.73
Tube1-201ENSMUST00000019991 Krtap9-5A2A5X3 358 aa4.21□□□□□ -1.74
Tube1-201ENSMUST00000019991 Krtap19-2Q925I0 141 aa4.2□□□□□ -1.74
Tube1-201ENSMUST00000019991 Lce1dQ9D731 133 aa4.19□□□□□ -1.74
Tube1-201ENSMUST00000019991 SspoQ8CG65 4998 aa4.18□□□□□ -1.74
Tube1-201ENSMUST00000019991 Gm10061D3Z714 54 aa4.1□□□□□ -1.75
Tube1-201ENSMUST00000019991 Mdn1A2ANY6 5589 aaKnown RBP4.07□□□□□ -1.76
Tube1-201ENSMUST00000019991 Gm11569B1AQB1 180 aa4.03□□□□□ -1.76
Tube1-201ENSMUST00000019991 Lce1eQ9D139 143 aa4.01□□□□□ -1.77
Tube1-201ENSMUST00000019991 Mt2P02798 61 aa3.99□□□□□ -1.77
Tube1-201ENSMUST00000019991 Lce1gQ9D195 139 aa3.97□□□□□ -1.77
Tube1-201ENSMUST00000019991 Gm6358A0A087WPH4 74 aa3.91□□□□□ -1.78
Tube1-201ENSMUST00000019991 Gm11938Q9D3H4 131 aa3.9□□□□□ -1.79
Tube1-201ENSMUST00000019991 A030003K21RikA0A1Y7VIM3 128 aa3.89□□□□□ -1.79
Tube1-201ENSMUST00000019991 Gm6217A0A1Y7VJK9 128 aa3.89□□□□□ -1.79
Tube1-201ENSMUST00000019991 Sprr2gO70558 76 aa3.89□□□□□ -1.79
Tube1-201ENSMUST00000019991 A0A286YCP9 139 aa3.88□□□□□ -1.79
Tube1-201ENSMUST00000019991 Gm10272F7CZ33 110 aa3.88□□□□□ -1.79
Tube1-201ENSMUST00000019991 4933428G20RikQ9D3X4 101 aa3.86□□□□□ -1.79
Tube1-201ENSMUST00000019991 Syne2Q6ZWQ0 6874 aaKnown RBP3.85□□□□□ -1.79
Tube1-201ENSMUST00000019991 Muc5bE9Q5I3 4800 aa3.84□□□□□ -1.79
Tube1-201ENSMUST00000019991 Lce1cQ9D1C5 147 aa3.82□□□□□ -1.8
Tube1-201ENSMUST00000019991 Gm11596B1AQB0 205 aa3.79□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 98.1 ms