RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Fam229aB2KGE5 128 aa8.86□□□□□ -0.99
Trim54-201ENSMUST00000013771 Phxr4P15974 95 aa8.86□□□□□ -0.99
Trim54-201ENSMUST00000013771 Gm21798J3QNU5 87 aa8.79□□□□□ -1
Trim54-201ENSMUST00000013771 Defb38Q7TNV7 63 aa8.79□□□□□ -1
Trim54-201ENSMUST00000013771 Gm11555B1AQ89 175 aa8.74□□□□□ -1.01
Trim54-201ENSMUST00000013771 Krtap3-2Q9D638 99 aa8.74□□□□□ -1.01
Trim54-201ENSMUST00000013771 Krtap3-3Q9D7P0 99 aa8.74□□□□□ -1.01
Trim54-201ENSMUST00000013771 Gm11596B1AQB0 205 aa8.73□□□□□ -1.01
Trim54-201ENSMUST00000013771 Gm10337F7DEP7 55 aa8.73□□□□□ -1.01
Trim54-201ENSMUST00000013771 Gm10999F6Q4M4 69 aa8.71□□□□□ -1.01
Trim54-201ENSMUST00000013771 Sox16Q62247 57 aa8.71□□□□□ -1.01
Trim54-201ENSMUST00000013771 H2al1eQ810S6 105 aa8.71□□□□□ -1.01
Trim54-201ENSMUST00000013771 Gm20661K7N787 53 aa8.71□□□□□ -1.02
Trim54-201ENSMUST00000013771 Rnase13Q5GAM7 153 aa8.71□□□□□ -1.02
Trim54-201ENSMUST00000013771 Q8BGJ3 129 aa8.7□□□□□ -1.02
Trim54-201ENSMUST00000013771 H2al1bA0A087WP11 105 aa8.68□□□□□ -1.02
Trim54-201ENSMUST00000013771 H2al1kJ3QP08 105 aa8.68□□□□□ -1.02
Trim54-201ENSMUST00000013771 H2al1mQ9DAD9 105 aa8.68□□□□□ -1.02
Trim54-201ENSMUST00000013771 Ndufb1P0DN34 57 aa8.66□□□□□ -1.02
Trim54-201ENSMUST00000013771 4930507D05RikQ8C9C9 103 aa8.66□□□□□ -1.02
Trim54-201ENSMUST00000013771 Limd2Q8BGB5 128 aa8.63□□□□□ -1.03
Trim54-201ENSMUST00000013771 2310079G19RikQ9D6L6 185 aa8.63□□□□□ -1.03
Trim54-201ENSMUST00000013771 Uqcr11Q9CPX8 56 aa8.61□□□□□ -1.03
Trim54-201ENSMUST00000013771 Muc5bE9Q5I3 4800 aa8.59□□□□□ -1.03
Trim54-201ENSMUST00000013771 Gm4491E0CX42 125 aa8.59□□□□□ -1.03
Trim54-201ENSMUST00000013771 SptssbQ925E8 76 aa8.56□□□□□ -1.04
Trim54-201ENSMUST00000013771 Krtap4-6Q3V4B7 195 aa8.55□□□□□ -1.04
Trim54-201ENSMUST00000013771 9230102O04RikA2ASX7 82 aa8.54□□□□□ -1.04
Trim54-201ENSMUST00000013771 B930094E09RikQ8C4T2 136 aa8.53□□□□□ -1.04
Trim54-201ENSMUST00000013771 Lce1jD3YUU5 139 aa8.52□□□□□ -1.05
Trim54-201ENSMUST00000013771 4933415A04RikQ9D443 101 aa8.47□□□□□ -1.05
Trim54-201ENSMUST00000013771 Mdn1A2ANY6 5589 aaKnown RBP8.39□□□□□ -1.07
Trim54-201ENSMUST00000013771 Gm17416Q30KP4 66 aa8.38□□□□□ -1.07
Trim54-201ENSMUST00000013771 Krtap4-1Q3UUY3 169 aa8.38□□□□□ -1.07
Trim54-201ENSMUST00000013771 Defb1P56386 69 aa8.33□□□□□ -1.08
Trim54-201ENSMUST00000013771 Krtap13-1Q8K198 168 aa8.33□□□□□ -1.08
Trim54-201ENSMUST00000013771 Cox6b2Q80ZN9 88 aa8.27□□□□□ -1.09
Trim54-201ENSMUST00000013771 Krtap9-5A2A5X3 358 aa8.24□□□□□ -1.09
Trim54-201ENSMUST00000013771 Krtap19-2Q925I0 141 aa8.22□□□□□ -1.09
Trim54-201ENSMUST00000013771 Gm11564A2A4L9 201 aa8.21□□□□□ -1.09
Trim54-201ENSMUST00000013771 Gm11563B1AQ90 168 aa8.21□□□□□ -1.09
Trim54-201ENSMUST00000013771 Gm11595B1AQA7 289 aa8.21□□□□□ -1.09
Trim54-201ENSMUST00000013771 Krtap4-8B1AQA8 209 aa8.21□□□□□ -1.09
Trim54-201ENSMUST00000013771 Sec61gP60060 68 aa8.2□□□□□ -1.1
Trim54-201ENSMUST00000013771 Krtap1-5A2A590 122 aa8.18□□□□□ -1.1
Trim54-201ENSMUST00000013771 Gm3646F6S692 53 aa8.11□□□□□ -1.11
Trim54-201ENSMUST00000013771 Gm17606F6ZL36 78 aa8.06□□□□□ -1.12
Trim54-201ENSMUST00000013771 2210017I01RikA0A0A6YVV1 95 aa8.04□□□□□ -1.12
Trim54-201ENSMUST00000013771 Ndufs5Q99LY9 106 aa7.97□□□□□ -1.13
Trim54-201ENSMUST00000013771 Krtap12-1Q9Z287 130 aa7.97□□□□□ -1.13
Trim54-201ENSMUST00000013771 Krtap4-9B1AQA9 244 aa7.95□□□□□ -1.14
Trim54-201ENSMUST00000013771 Pla2g10Q9QXX3 151 aa7.95□□□□□ -1.14
Trim54-201ENSMUST00000013771 Gm9955Q8CEJ8 102 aa7.94□□□□□ -1.14
Trim54-201ENSMUST00000013771 Gm6358A0A087WPH4 74 aa7.9□□□□□ -1.14
Trim54-201ENSMUST00000013771 Gm19426M0QWC7 77 aa7.9□□□□□ -1.14
Trim54-201ENSMUST00000013771 Krtap3-1A2A591 98 aa7.89□□□□□ -1.15
Trim54-201ENSMUST00000013771 Gm10382Q3V0T5 144 aa7.86□□□□□ -1.15
Trim54-201ENSMUST00000013771 Gm20537G3UYK7 97 aa7.83□□□□□ -1.16
Trim54-201ENSMUST00000013771 Fsip2A2ARZ3 6995 aa7.83□□□□□ -1.16
Trim54-201ENSMUST00000013771 Mt4P47945 62 aa7.8□□□□□ -1.16
Trim54-201ENSMUST00000013771 Prm2P07978 107 aa7.79□□□□□ -1.16
Trim54-201ENSMUST00000013771 Krtap19-9aF8WH65 55 aa7.72□□□□□ -1.17
Trim54-201ENSMUST00000013771 Krtap6-3A0A087WQL6 57 aa7.69□□□□□ -1.18
Trim54-201ENSMUST00000013771 BC029722A0A0N4SW31 51 aa7.67□□□□□ -1.18
Trim54-201ENSMUST00000013771 Krtap4-13Q9D7P3 165 aa7.67□□□□□ -1.18
Trim54-201ENSMUST00000013771 Gm3880A0A1B0GSB3 72 aa7.61□□□□□ -1.19
Trim54-201ENSMUST00000013771 Krtap9-3Q3V2C1 136 aa7.58□□□□□ -1.2
Trim54-201ENSMUST00000013771 Gm17402F6Z0L5 76 aa7.52□□□□□ -1.21
Trim54-201ENSMUST00000013771 Sprr2kO70562 68 aa7.5□□□□□ -1.21
Trim54-201ENSMUST00000013771 Lce1iQ9D6P5 149 aa7.48□□□□□ -1.21
Trim54-201ENSMUST00000013771 CriptO70333 101 aa7.44□□□□□ -1.22
Trim54-201ENSMUST00000013771 Gm12216A0A1W2P827 62 aa7.44□□□□□ -1.22
Trim54-201ENSMUST00000013771 Mt2P02798 61 aa7.42□□□□□ -1.22
Trim54-201ENSMUST00000013771 Lce1bQ9D149 137 aa7.42□□□□□ -1.22
Trim54-201ENSMUST00000013771 Lce1lQ9D1G7 135 aa7.41□□□□□ -1.22
Trim54-201ENSMUST00000013771 Krtap8-1O08633 61 aa7.4□□□□□ -1.22
Trim54-201ENSMUST00000013771 Spink7Q6IE32 76 aa7.39□□□□□ -1.23
Trim54-201ENSMUST00000013771 Romo1P60603 79 aa7.38□□□□□ -1.23
Trim54-201ENSMUST00000013771 Lce1a2Q9D1K4 149 aa7.33□□□□□ -1.24
Trim54-201ENSMUST00000013771 2300003K06RikA2A4M0 262 aa7.32□□□□□ -1.24
Trim54-201ENSMUST00000013771 Gm38119A0A0A6YX29 146 aa7.3□□□□□ -1.24
Trim54-201ENSMUST00000013771 Krtap4-7Q9D732 168 aa7.26□□□□□ -1.25
Trim54-201ENSMUST00000013771 Sprr2a3Q4KL71 83 aa7.21□□□□□ -1.25
Trim54-201ENSMUST00000013771 Sprr2a1Q9CQK8 83 aa7.21□□□□□ -1.25
Trim54-201ENSMUST00000013771 Krtap22-2J3QNX6 67 aa7.09□□□□□ -1.28
Trim54-201ENSMUST00000013771 Lce1a1Q9CQH5 143 aa7.06□□□□□ -1.28
Trim54-201ENSMUST00000013771 Gm21887J3QQ04 176 aa7.05□□□□□ -1.28
Trim54-201ENSMUST00000013771 Sprr2gO70558 76 aa7.04□□□□□ -1.28
Trim54-201ENSMUST00000013771 Krtap20-2E9Q0A8 60 aa7.02□□□□□ -1.29
Trim54-201ENSMUST00000013771 Lce1hQ9D6R3 140 aa7□□□□□ -1.29
Trim54-201ENSMUST00000013771 Lce1eQ9D139 143 aa6.95□□□□□ -1.3
Trim54-201ENSMUST00000013771 2310046K23RikA0A0A6YVW6 87 aa6.83□□□□□ -1.32
Trim54-201ENSMUST00000013771 Camk2n1Q6QWF9 78 aa6.83□□□□□ -1.32
Trim54-201ENSMUST00000013771 Gm40193A0A1B0GT39 78 aa6.82□□□□□ -1.32
Trim54-201ENSMUST00000013771 Gm19668J3QMD1 248 aa6.79□□□□□ -1.32
Trim54-201ENSMUST00000013771 Krtap7-1Q9D3I6 87 aa6.69□□□□□ -1.34
Trim54-201ENSMUST00000013771 Mp68P56379 58 aa6.66□□□□□ -1.34
Trim54-201ENSMUST00000013771 Eppk1Q8R0W0 6548 aa6.64□□□□□ -1.35
Trim54-201ENSMUST00000013771 A0A1Y7VJH8 109 aa6.57□□□□□ -1.36
Trim54-201ENSMUST00000013771 Lce1dQ9D731 133 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 75.4 ms