RNA–Protein interactions for RNA: ENSMUST00000006476.5

Upk1a-201, Transcript of Uroplakin-1a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk1a, Length 1,421 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1a-201ENSMUST00000006476 Gm20661K7N787 53 aa7.23□□□□□ -1.25
Upk1a-201ENSMUST00000006476 Fat4Q2PZL6 4981 aa7.23□□□□□ -1.25
Upk1a-201ENSMUST00000006476 Krtap1-5A2A590 122 aa7.22□□□□□ -1.25
Upk1a-201ENSMUST00000006476 Gm19402J3QJV4 266 aa7.21□□□□□ -1.25
Upk1a-201ENSMUST00000006476 Krtap4-2B1AQ85 167 aa7.19□□□□□ -1.26
Upk1a-201ENSMUST00000006476 LorP18165 486 aa7.18□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Rps28P62858 69 aaKnown RBP7.18□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Krtap1-4Q3V2D6 188 aa7.18□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Krtap3-1A2A591 98 aa7.17□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Gm10197F6QEY5 67 aa7.17□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Gm17606F6ZL36 78 aa7.17□□□□□ -1.26
Upk1a-201ENSMUST00000006476 H2al1aQ5M8Q2 105 aa7.17□□□□□ -1.26
Upk1a-201ENSMUST00000006476 H2al1eQ810S6 105 aa7.17□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Phxr4P15974 95 aa7.16□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Brk1Q91VR8 75 aa7.16□□□□□ -1.26
Upk1a-201ENSMUST00000006476 Gm10318A0A1W2P728 225 aa7.14□□□□□ -1.27
Upk1a-201ENSMUST00000006476 Rnf213E9Q555 5152 aaKnown RBP7.13□□□□□ -1.27
Upk1a-201ENSMUST00000006476 Uqcr11Q9CPX8 56 aa7.1□□□□□ -1.27
Upk1a-201ENSMUST00000006476 Limd2Q8BGB5 128 aa7.05□□□□□ -1.28
Upk1a-201ENSMUST00000006476 H2al1bA0A087WP11 105 aa7.03□□□□□ -1.28
Upk1a-201ENSMUST00000006476 Ndufb1P0DN34 57 aa7.01□□□□□ -1.29
Upk1a-201ENSMUST00000006476 Gm20537G3UYK7 97 aa7□□□□□ -1.29
Upk1a-201ENSMUST00000006476 Gm10382Q3V0T5 144 aa6.98□□□□□ -1.29
Upk1a-201ENSMUST00000006476 Lce1gQ9D195 139 aa6.97□□□□□ -1.29
Upk1a-201ENSMUST00000006476 BC029722A0A0N4SW31 51 aa6.96□□□□□ -1.3
Upk1a-201ENSMUST00000006476 Gm11569B1AQB1 180 aa6.94□□□□□ -1.3
Upk1a-201ENSMUST00000006476 Sec61gP60060 68 aa6.94□□□□□ -1.3
Upk1a-201ENSMUST00000006476 Gm19426M0QWC7 77 aa6.93□□□□□ -1.3
Upk1a-201ENSMUST00000006476 Syne2Q6ZWQ0 6874 aaKnown RBP6.89□□□□□ -1.31
Upk1a-201ENSMUST00000006476 Gm10061D3Z714 54 aa6.89□□□□□ -1.31
Upk1a-201ENSMUST00000006476 SspoQ8CG65 4998 aa6.86□□□□□ -1.31
Upk1a-201ENSMUST00000006476 Pcp4P63054 62 aa6.81□□□□□ -1.32
Upk1a-201ENSMUST00000006476 Gm9955Q8CEJ8 102 aa6.78□□□□□ -1.32
Upk1a-201ENSMUST00000006476 CriptO70333 101 aa6.77□□□□□ -1.33
Upk1a-201ENSMUST00000006476 Gm11596B1AQB0 205 aa6.68□□□□□ -1.34
Upk1a-201ENSMUST00000006476 Krtap12-1Q9Z287 130 aa6.67□□□□□ -1.34
Upk1a-201ENSMUST00000006476 Sox16Q62247 57 aa6.67□□□□□ -1.34
Upk1a-201ENSMUST00000006476 Spink7Q6IE32 76 aa6.65□□□□□ -1.35
Upk1a-201ENSMUST00000006476 Lce1jD3YUU5 139 aa6.62□□□□□ -1.35
Upk1a-201ENSMUST00000006476 Gm17402F6Z0L5 76 aa6.62□□□□□ -1.35
Upk1a-201ENSMUST00000006476 Gm11555B1AQ89 175 aa6.6□□□□□ -1.35
Upk1a-201ENSMUST00000006476 Krtap19-9aF8WH65 55 aa6.59□□□□□ -1.35
Upk1a-201ENSMUST00000006476 Krtap19-2Q925I0 141 aa6.57□□□□□ -1.36
Upk1a-201ENSMUST00000006476 4933415A04RikQ9D443 101 aa6.55□□□□□ -1.36
Upk1a-201ENSMUST00000006476 Krtap9-5A2A5X3 358 aa6.52□□□□□ -1.37
Upk1a-201ENSMUST00000006476 H2al1kJ3QP08 105 aa6.5□□□□□ -1.37
Upk1a-201ENSMUST00000006476 B930094E09RikQ8C4T2 136 aa6.5□□□□□ -1.37
Upk1a-201ENSMUST00000006476 Muc5bE9Q5I3 4800 aa6.5□□□□□ -1.37
Upk1a-201ENSMUST00000006476 Sprr2a3Q4KL71 83 aa6.5□□□□□ -1.37
Upk1a-201ENSMUST00000006476 Sprr2a1Q9CQK8 83 aa6.5□□□□□ -1.37
Upk1a-201ENSMUST00000006476 Krtap4-6Q3V4B7 195 aa6.47□□□□□ -1.37
Upk1a-201ENSMUST00000006476 Pla2g10Q9QXX3 151 aa6.47□□□□□ -1.37
Upk1a-201ENSMUST00000006476 Prm2P07978 107 aa6.45□□□□□ -1.38
Upk1a-201ENSMUST00000006476 Gm10337F7DEP7 55 aa6.41□□□□□ -1.38
Upk1a-201ENSMUST00000006476 H2al1mQ9DAD9 105 aa6.39□□□□□ -1.39
Upk1a-201ENSMUST00000006476 Krtap4-1Q3UUY3 169 aa6.35□□□□□ -1.39
Upk1a-201ENSMUST00000006476 Ndufs5Q99LY9 106 aa6.33□□□□□ -1.4
Upk1a-201ENSMUST00000006476 Gm3880A0A1B0GSB3 72 aa6.29□□□□□ -1.4
Upk1a-201ENSMUST00000006476 Mdn1A2ANY6 5589 aaKnown RBP6.29□□□□□ -1.4
Upk1a-201ENSMUST00000006476 Gm3646F6S692 53 aa6.27□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Gm11564A2A4L9 201 aa6.24□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Gm11563B1AQ90 168 aa6.24□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Gm11595B1AQA7 289 aa6.24□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Krtap4-8B1AQA8 209 aa6.24□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Gm6358A0A087WPH4 74 aa6.23□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Lce1iQ9D6P5 149 aa6.22□□□□□ -1.41
Upk1a-201ENSMUST00000006476 Gm19668J3QMD1 248 aa6.19□□□□□ -1.42
Upk1a-201ENSMUST00000006476 Lce1a2Q9D1K4 149 aa6.12□□□□□ -1.43
Upk1a-201ENSMUST00000006476 Gm12216A0A1W2P827 62 aa6.11□□□□□ -1.43
Upk1a-201ENSMUST00000006476 Gm21887J3QQ04 176 aa6.1□□□□□ -1.43
Upk1a-201ENSMUST00000006476 Camk2n1Q6QWF9 78 aa6.05□□□□□ -1.44
Upk1a-201ENSMUST00000006476 Krtap4-9B1AQA9 244 aa6.03□□□□□ -1.44
Upk1a-201ENSMUST00000006476 Mt2P02798 61 aa6.02□□□□□ -1.45
Upk1a-201ENSMUST00000006476 Romo1P60603 79 aa6.01□□□□□ -1.45
Upk1a-201ENSMUST00000006476 Fsip2A2ARZ3 6995 aa5.97□□□□□ -1.45
Upk1a-201ENSMUST00000006476 Krtap8-1O08633 61 aa5.91□□□□□ -1.46
Upk1a-201ENSMUST00000006476 SvipQ3UZP4 77 aa5.87□□□□□ -1.47
Upk1a-201ENSMUST00000006476 Krtap19-9bQ99NG9 58 aa5.87□□□□□ -1.47
Upk1a-201ENSMUST00000006476 Mt4P47945 62 aa5.85□□□□□ -1.47
Upk1a-201ENSMUST00000006476 Krtap6-3A0A087WQL6 57 aa5.84□□□□□ -1.47
Upk1a-201ENSMUST00000006476 Krtap4-13Q9D7P3 165 aa5.83□□□□□ -1.48
Upk1a-201ENSMUST00000006476 Krtap22-2J3QNX6 67 aa5.74□□□□□ -1.49
Upk1a-201ENSMUST00000006476 Krtap9-3Q3V2C1 136 aa5.68□□□□□ -1.5
Upk1a-201ENSMUST00000006476 Lce1lQ9D1G7 135 aa5.64□□□□□ -1.51
Upk1a-201ENSMUST00000006476 Sprr2kO70562 68 aa5.57□□□□□ -1.52
Upk1a-201ENSMUST00000006476 Gm40193A0A1B0GT39 78 aa5.52□□□□□ -1.53
Upk1a-201ENSMUST00000006476 Lce1bQ9D149 137 aa5.48□□□□□ -1.53
Upk1a-201ENSMUST00000006476 2300003K06RikA2A4M0 262 aa5.48□□□□□ -1.53
Upk1a-201ENSMUST00000006476 Krtap4-7Q9D732 168 aa5.44□□□□□ -1.54
Upk1a-201ENSMUST00000006476 Krtap7-1Q9D3I6 87 aa5.43□□□□□ -1.54
Upk1a-201ENSMUST00000006476 Gm38119A0A0A6YX29 146 aa5.42□□□□□ -1.54
Upk1a-201ENSMUST00000006476 Tnp1P10856 55 aa5.41□□□□□ -1.54
Upk1a-201ENSMUST00000006476 Lce1a1Q9CQH5 143 aa5.39□□□□□ -1.55
Upk1a-201ENSMUST00000006476 Lce1hQ9D6R3 140 aa5.36□□□□□ -1.55
Upk1a-201ENSMUST00000006476 Lce1eQ9D139 143 aa5.34□□□□□ -1.55
Upk1a-201ENSMUST00000006476 Krtap20-2E9Q0A8 60 aa5.31□□□□□ -1.56
Upk1a-201ENSMUST00000006476 Eppk1Q8R0W0 6548 aa5.22□□□□□ -1.57
Upk1a-201ENSMUST00000006476 Sprr2gO70558 76 aa5.18□□□□□ -1.58
Upk1a-201ENSMUST00000006476 Mp68P56379 58 aa5.17□□□□□ -1.58
Upk1a-201ENSMUST00000006476 2310046K23RikA0A0A6YVW6 87 aa5.14□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 74.8 ms