RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Prm2P07978 107 aa6.48□□□□□ -1.37
Ufd1-201ENSMUST00000005394 Gm9955Q8CEJ8 102 aa6.48□□□□□ -1.37
Ufd1-201ENSMUST00000005394 Lrp2A2ARV4 4660 aa6.39□□□□□ -1.39
Ufd1-201ENSMUST00000005394 Rpl37Q9D823 97 aa6.32□□□□□ -1.4
Ufd1-201ENSMUST00000005394 CriptO70333 101 aa6.26□□□□□ -1.41
Ufd1-201ENSMUST00000005394 Gm10382Q3V0T5 144 aa6.26□□□□□ -1.41
Ufd1-201ENSMUST00000005394 Ndufaf8A2AMZ4 74 aa6.24□□□□□ -1.41
Ufd1-201ENSMUST00000005394 Gm17606F6ZL36 78 aa6.24□□□□□ -1.41
Ufd1-201ENSMUST00000005394 Gm5767A0A0J9YTU8 78 aa6.24□□□□□ -1.41
Ufd1-201ENSMUST00000005394 Rnase13Q5GAM7 153 aa6.21□□□□□ -1.42
Ufd1-201ENSMUST00000005394 Ush2AQ2QI47 5193 aa6.2□□□□□ -1.42
Ufd1-201ENSMUST00000005394 Gm9736A0A1W2P7N1 277 aa6.18□□□□□ -1.42
Ufd1-201ENSMUST00000005394 Prm1P02319 51 aa6.17□□□□□ -1.42
Ufd1-201ENSMUST00000005394 Gm7735D3YX18 52 aa6.15□□□□□ -1.43
Ufd1-201ENSMUST00000005394 Krtap3-1A2A591 98 aa6.11□□□□□ -1.43
Ufd1-201ENSMUST00000005394 Gm17416Q30KP4 66 aa6.1□□□□□ -1.43
Ufd1-201ENSMUST00000005394 4932415D10RikA0A1W2P6U8 4986 aa6.1□□□□□ -1.43
Ufd1-201ENSMUST00000005394 Gm9789Q8BIG3 52 aa6.09□□□□□ -1.43
Ufd1-201ENSMUST00000005394 Ubr4A2AN08 5180 aa6.08□□□□□ -1.44
Ufd1-201ENSMUST00000005394 Hmcn2A2AJ76 5100 aa6.07□□□□□ -1.44
Ufd1-201ENSMUST00000005394 Gm21887J3QQ04 176 aa6.02□□□□□ -1.45
Ufd1-201ENSMUST00000005394 Gm19426M0QWC7 77 aa5.98□□□□□ -1.45
Ufd1-201ENSMUST00000005394 B930094E09RikQ8C4T2 136 aa5.98□□□□□ -1.45
Ufd1-201ENSMUST00000005394 2210017I01RikA0A0A6YVV1 95 aa5.97□□□□□ -1.45
Ufd1-201ENSMUST00000005394 Krtap4-1Q3UUY3 169 aa5.96□□□□□ -1.46
Ufd1-201ENSMUST00000005394 Gm40193A0A1B0GT39 78 aa5.95□□□□□ -1.46
Ufd1-201ENSMUST00000005394 Gm5965D3Z724 196 aa5.95□□□□□ -1.46
Ufd1-201ENSMUST00000005394 Krtap7-1Q9D3I6 87 aa5.95□□□□□ -1.46
Ufd1-201ENSMUST00000005394 Gm9112A2AI92 75 aa5.91□□□□□ -1.46
Ufd1-201ENSMUST00000005394 Gm17402F6Z0L5 76 aa5.91□□□□□ -1.46
Ufd1-201ENSMUST00000005394 Krtap15-1Q9QZU5 150 aa5.89□□□□□ -1.47
Ufd1-201ENSMUST00000005394 A0A1Y7VJH8 109 aa5.85□□□□□ -1.47
Ufd1-201ENSMUST00000005394 2310057N15RikQ9D6T8 200 aa5.83□□□□□ -1.48
Ufd1-201ENSMUST00000005394 BC029722A0A0N4SW31 51 aa5.8□□□□□ -1.48
Ufd1-201ENSMUST00000005394 Fam229aB2KGE5 128 aa5.8□□□□□ -1.48
Ufd1-201ENSMUST00000005394 ZanO88799 5376 aa5.73□□□□□ -1.49
Ufd1-201ENSMUST00000005394 Krtap1-3A2A588 173 aa5.69□□□□□ -1.5
Ufd1-201ENSMUST00000005394 Sec61bQ9CQS8 96 aaKnown RBP5.68□□□□□ -1.5
Ufd1-201ENSMUST00000005394 Krtap13-1Q8K198 168 aa5.66□□□□□ -1.5
Ufd1-201ENSMUST00000005394 Fat4Q2PZL6 4981 aa5.64□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Crct1Q6PAI5 102 aa5.62□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Sprr2a3Q4KL71 83 aa5.6□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Sprr2a1Q9CQK8 83 aa5.6□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Krtap1-5A2A590 122 aa5.59□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Gm19402J3QJV4 266 aa5.59□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Gm19668J3QMD1 248 aa5.59□□□□□ -1.51
Ufd1-201ENSMUST00000005394 Krtap28-10A0A1Y7VP58 119 aa5.56□□□□□ -1.52
Ufd1-201ENSMUST00000005394 LorP18165 486 aa5.56□□□□□ -1.52
Ufd1-201ENSMUST00000005394 Gm11563B1AQ90 168 aa5.54□□□□□ -1.52
Ufd1-201ENSMUST00000005394 Krtap4-7Q9D732 168 aa5.54□□□□□ -1.52
Ufd1-201ENSMUST00000005394 Rnf213E9Q555 5152 aaKnown RBP5.51□□□□□ -1.53
Ufd1-201ENSMUST00000005394 Gm11555B1AQ89 175 aa5.51□□□□□ -1.53
Ufd1-201ENSMUST00000005394 Camk2n1Q6QWF9 78 aa5.47□□□□□ -1.53
Ufd1-201ENSMUST00000005394 Krtap17-1A2A5X6 109 aa5.42□□□□□ -1.54
Ufd1-201ENSMUST00000005394 Gm10318A0A1W2P728 225 aa5.42□□□□□ -1.54
Ufd1-201ENSMUST00000005394 Krtap16-3Q8C1I6 86 aa5.4□□□□□ -1.54
Ufd1-201ENSMUST00000005394 Gm10061D3Z714 54 aa5.4□□□□□ -1.55
Ufd1-201ENSMUST00000005394 Krtap19-3Q925H6 87 aa5.4□□□□□ -1.55
Ufd1-201ENSMUST00000005394 Krtap19-1Q925H2 87 aa5.38□□□□□ -1.55
Ufd1-201ENSMUST00000005394 A0A1Y7VLE6 161 aa5.36□□□□□ -1.55
Ufd1-201ENSMUST00000005394 Gm11562A0PK51 136 aa5.36□□□□□ -1.55
Ufd1-201ENSMUST00000005394 Spink7Q6IE32 76 aa5.33□□□□□ -1.56
Ufd1-201ENSMUST00000005394 Gm11569B1AQB1 180 aa5.31□□□□□ -1.56
Ufd1-201ENSMUST00000005394 Gm7544A0A1Y7VJ58 118 aa5.3□□□□□ -1.56
Ufd1-201ENSMUST00000005394 Krtap1-4Q3V2D6 188 aa5.29□□□□□ -1.56
Ufd1-201ENSMUST00000005394 A030005L19RikA0A1Y7VIU2 113 aa5.25□□□□□ -1.57
Ufd1-201ENSMUST00000005394 SspoQ8CG65 4998 aa5.25□□□□□ -1.57
Ufd1-201ENSMUST00000005394 Krtap4-2B1AQ85 167 aa5.25□□□□□ -1.57
Ufd1-201ENSMUST00000005394 Tnp1P10856 55 aa5.2□□□□□ -1.58
Ufd1-201ENSMUST00000005394 Krtap28-13A0A087WQP5 138 aa5.16□□□□□ -1.58
Ufd1-201ENSMUST00000005394 Lce1gQ9D195 139 aa5.15□□□□□ -1.58
Ufd1-201ENSMUST00000005394 A030005K14RikA0A1Y7VNY1 122 aa5.13□□□□□ -1.59
Ufd1-201ENSMUST00000005394 Syne2Q6ZWQ0 6874 aaKnown RBP5.07□□□□□ -1.6
Ufd1-201ENSMUST00000005394 2310046K23RikA0A0A6YVW6 87 aa5.01□□□□□ -1.61
Ufd1-201ENSMUST00000005394 Gm11596B1AQB0 205 aa4.96□□□□□ -1.62
Ufd1-201ENSMUST00000005394 Muc5bE9Q5I3 4800 aa4.94□□□□□ -1.62
Ufd1-201ENSMUST00000005394 Mdn1A2ANY6 5589 aaKnown RBP4.91□□□□□ -1.62
Ufd1-201ENSMUST00000005394 Krtap4-6Q3V4B7 195 aa4.9□□□□□ -1.63
Ufd1-201ENSMUST00000005394 Krtap9-5A2A5X3 358 aa4.87□□□□□ -1.63
Ufd1-201ENSMUST00000005394 Krtap8-1O08633 61 aa4.87□□□□□ -1.63
Ufd1-201ENSMUST00000005394 Krtap19-9aF8WH65 55 aa4.86□□□□□ -1.63
Ufd1-201ENSMUST00000005394 Krtap19-2Q925I0 141 aa4.86□□□□□ -1.63
Ufd1-201ENSMUST00000005394 Krtap12-1Q9Z287 130 aa4.82□□□□□ -1.64
Ufd1-201ENSMUST00000005394 Lce1jD3YUU5 139 aa4.82□□□□□ -1.64
Ufd1-201ENSMUST00000005394 Krtap19-9bQ99NG9 58 aa4.74□□□□□ -1.65
Ufd1-201ENSMUST00000005394 Gm11564A2A4L9 201 aa4.69□□□□□ -1.66
Ufd1-201ENSMUST00000005394 Gm11595B1AQA7 289 aa4.69□□□□□ -1.66
Ufd1-201ENSMUST00000005394 Krtap4-8B1AQA8 209 aa4.69□□□□□ -1.66
Ufd1-201ENSMUST00000005394 Gm6358A0A087WPH4 74 aa4.67□□□□□ -1.66
Ufd1-201ENSMUST00000005394 A030003K21RikA0A1Y7VIM3 128 aa4.65□□□□□ -1.66
Ufd1-201ENSMUST00000005394 A0A286YCP9 139 aa4.63□□□□□ -1.67
Ufd1-201ENSMUST00000005394 Gm6217A0A1Y7VJK9 128 aa4.57□□□□□ -1.68
Ufd1-201ENSMUST00000005394 Krtap4-9B1AQA9 244 aa4.56□□□□□ -1.68
Ufd1-201ENSMUST00000005394 Fsip2A2ARZ3 6995 aa4.55□□□□□ -1.68
Ufd1-201ENSMUST00000005394 Lce1iQ9D6P5 149 aa4.54□□□□□ -1.68
Ufd1-201ENSMUST00000005394 Krtap9-3Q3V2C1 136 aa4.54□□□□□ -1.68
Ufd1-201ENSMUST00000005394 Lce1a2Q9D1K4 149 aa4.53□□□□□ -1.68
Ufd1-201ENSMUST00000005394 Lce1hQ9D6R3 140 aa4.51□□□□□ -1.69
Ufd1-201ENSMUST00000005394 Mt4P47945 62 aa4.49□□□□□ -1.69
Ufd1-201ENSMUST00000005394 4933428G20RikQ9D3X4 101 aa4.44□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 155.6 ms