RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C KTR3P38130 404 aaPredicted RBP7.04□□□□□ -1.28
ATG17YLR423C UBS1P38290 277 aa7.04□□□□□ -1.28
ATG17YLR423C LAS21P40367 830 aa7.04□□□□□ -1.28
ATG17YLR423C PFK26P40433 827 aaKnown RBP7.04□□□□□ -1.28
ATG17YLR423C COQ6P53318 479 aa7.04□□□□□ -1.28
ATG17YLR423C AAT1Q01802 451 aa7.04□□□□□ -1.28
ATG17YLR423C UBP16Q02863 499 aa7.04□□□□□ -1.28
ATG17YLR423C GSF2Q04697 403 aaKnown RBP7.04□□□□□ -1.28
ATG17YLR423C SEM1O94742 89 aa7.03□□□□□ -1.28
ATG17YLR423C RNR3P21672 869 aaKnown RBP7.03□□□□□ -1.28
ATG17YLR423C UBX6P47049 396 aa7.03□□□□□ -1.28
ATG17YLR423C YGR079WP53249 370 aa7.03□□□□□ -1.28
ATG17YLR423C RCO1Q04779 684 aa7.03□□□□□ -1.28
ATG17YLR423C GTB1Q04924 702 aa7.03□□□□□ -1.28
ATG17YLR423C ATG23Q06671 453 aa7.03□□□□□ -1.28
ATG17YLR423C HUA2Q12134 243 aa7.03□□□□□ -1.28
ATG17YLR423C CDC24P11433 854 aaPredicted RBP7.02□□□□□ -1.29
ATG17YLR423C ERG8P24521 451 aa7.02□□□□□ -1.29
ATG17YLR423C MRP20P32387 263 aa7.02□□□□□ -1.29
ATG17YLR423C RPF2P36160 344 aaKnown RBP7.02□□□□□ -1.29
ATG17YLR423C TDP1P38319 544 aa7.02□□□□□ -1.29
ATG17YLR423C CCT7P42943 550 aaKnown RBP7.02□□□□□ -1.29
ATG17YLR423C UPF3P48412 387 aaKnown RBP7.02□□□□□ -1.29
ATG17YLR423C VPS4P52917 437 aa7.02□□□□□ -1.29
ATG17YLR423C COG2P53271 262 aa7.02□□□□□ -1.29
ATG17YLR423C MRP7P12687 371 aa7.01□□□□□ -1.29
ATG17YLR423C LRE1P25579 583 aaKnown RBP7.01□□□□□ -1.29
ATG17YLR423C TFC3P34111 1160 aa7.01□□□□□ -1.29
ATG17YLR423C YPT10P38146 199 aa7.01□□□□□ -1.29
ATG17YLR423C SRB7P47822 140 aa7.01□□□□□ -1.29
ATG17YLR423C IMO32P53219 342 aa7.01□□□□□ -1.29
ATG17YLR423C YML119WQ03208 357 aa7.01□□□□□ -1.29
ATG17YLR423C YDL242WQ07746 117 aa7.01□□□□□ -1.29
ATG17YLR423C CPA2P03965 1118 aaKnown RBP7□□□□□ -1.29
ATG17YLR423C TPK2P06245 380 aa7□□□□□ -1.29
ATG17YLR423C STE12P13574 688 aa7□□□□□ -1.29
ATG17YLR423C YMC2P38087 329 aa7□□□□□ -1.29
ATG17YLR423C PSD1P39006 500 aa7□□□□□ -1.29
ATG17YLR423C ESL1P40456 1118 aa7□□□□□ -1.29
ATG17YLR423C SDS3P40505 327 aa7□□□□□ -1.29
ATG17YLR423C ARC1P46672 376 aaKnown RBP7□□□□□ -1.29
ATG17YLR423C FCP1Q03254 732 aa7□□□□□ -1.29
ATG17YLR423C YML053CQ04978 212 aa7□□□□□ -1.29
ATG17YLR423C TAF3Q12297 353 aa7□□□□□ -1.29
ATG17YLR423C CDC31P06704 161 aaKnown RBP6.99□□□□□ -1.29
ATG17YLR423C RPB2P08518 1224 aaKnown RBP6.99□□□□□ -1.29
ATG17YLR423C KGD2P19262 463 aaPredicted RBP6.99□□□□□ -1.29
ATG17YLR423C AMD2P22580 549 aa6.99□□□□□ -1.29
ATG17YLR423C CDC15P27636 974 aa6.99□□□□□ -1.29
ATG17YLR423C YBL029WP38201 376 aa6.99□□□□□ -1.29
ATG17YLR423C BUD16P39988 312 aa6.99□□□□□ -1.29
ATG17YLR423C MIT1P40002 666 aa6.99□□□□□ -1.29
ATG17YLR423C UBP7P40453 1071 aa6.99□□□□□ -1.29
ATG17YLR423C RBG2P53295 368 aaKnown RBP6.99□□□□□ -1.29
ATG17YLR423C WAR1Q03631 944 aa6.99□□□□□ -1.29
ATG17YLR423C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
ATG17YLR423C LYS21Q12122 440 aaKnown RBP6.99□□□□□ -1.29
ATG17YLR423C CHO2P05374 869 aaKnown RBP6.98□□□□□ -1.29
ATG17YLR423C RFA2P26754 273 aaKnown RBP6.98□□□□□ -1.29
ATG17YLR423C ALY1P36117 915 aa6.98□□□□□ -1.29
ATG17YLR423C CHS7P38843 316 aa6.98□□□□□ -1.29
ATG17YLR423C DJP1P40564 432 aa6.98□□□□□ -1.29
ATG17YLR423C SIP4P46954 829 aa6.98□□□□□ -1.29
ATG17YLR423C CPR8P53728 308 aa6.98□□□□□ -1.29
ATG17YLR423C MRI1Q06489 411 aaKnown RBP6.98□□□□□ -1.29
ATG17YLR423C ENT4Q07872 247 aa6.98□□□□□ -1.29
ATG17YLR423C AHA1Q12449 350 aaKnown RBP6.98□□□□□ -1.29
ATG17YLR423C YBR126W-AQ8TGU7 68 aa6.98□□□□□ -1.29
ATG17YLR423C VCX1Q99385 411 aa6.98□□□□□ -1.29
ATG17YLR423C COX1P00401 534 aa6.97□□□□□ -1.29
ATG17YLR423C CMK1P27466 446 aaKnown RBP6.97□□□□□ -1.29
ATG17YLR423C GDA1P32621 518 aa6.97□□□□□ -1.29
ATG17YLR423C NPA3P47122 385 aa6.97□□□□□ -1.29
ATG17YLR423C ASN1P49089 572 aaKnown RBP6.97□□□□□ -1.29
ATG17YLR423C YNL092WP53934 400 aa6.97□□□□□ -1.29
ATG17YLR423C RAD30Q04049 632 aa6.97□□□□□ -1.29
ATG17YLR423C YDR109CQ04585 715 aa6.97□□□□□ -1.29
ATG17YLR423C VIP1Q06685 1146 aaKnown RBP6.97□□□□□ -1.29
ATG17YLR423C SDH5Q08230 162 aa6.97□□□□□ -1.29
ATG17YLR423C AI5_ALPHAQ9ZZX1 630 aa6.97□□□□□ -1.29
ATG17YLR423C SEC53P07283 254 aaKnown RBP6.96□□□□□ -1.3
ATG17YLR423C YML003WP0CF16 290 aa6.96□□□□□ -1.3
ATG17YLR423C SAC6P32599 642 aaKnown RBP6.96□□□□□ -1.3
ATG17YLR423C OAR1P35731 278 aa6.96□□□□□ -1.3
ATG17YLR423C NOP4P37838 685 aaKnown RBP6.96□□□□□ -1.3
ATG17YLR423C MUP3P38734 546 aa6.96□□□□□ -1.3
ATG17YLR423C DUO1P53168 247 aaKnown RBP6.96□□□□□ -1.3
ATG17YLR423C GND2P53319 492 aa6.96□□□□□ -1.3
ATG17YLR423C CTF4Q01454 927 aa6.96□□□□□ -1.3
ATG17YLR423C YSA1Q01976 231 aa6.96□□□□□ -1.3
ATG17YLR423C SPC19Q03954 165 aa6.96□□□□□ -1.3
ATG17YLR423C IMH1Q06704 911 aaKnown RBP6.96□□□□□ -1.3
ATG17YLR423C MRH1Q12117 320 aaPredicted RBP6.96□□□□□ -1.3
ATG17YLR423C TAH18Q12181 623 aa6.96□□□□□ -1.3
ATG17YLR423C PRS5Q12265 496 aaKnown RBP6.96□□□□□ -1.3
ATG17YLR423C ESL2P36168 1195 aa6.95□□□□□ -1.3
ATG17YLR423C MOH1P38191 138 aa6.95□□□□□ -1.3
ATG17YLR423C YGL117WP53133 265 aa6.95□□□□□ -1.3
ATG17YLR423C PLM2Q04383 521 aa6.95□□□□□ -1.3
ATG17YLR423C PSK2Q08217 1101 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 104.4 ms