RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	STE12	P13574	688 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	HSC82	P15108	705 aa	Known RBP	2.29	□□□□□ -2.04
RIC1	YLR039C	YSP3	P25036	478 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	NPA3	P47122	385 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	IMH1	Q06704	911 aa	Known RBP	2.29	□□□□□ -2.04
RIC1	YLR039C	PSK2	Q08217	1101 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	YLR302C	O13544	120 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	BDH2	P39713	417 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	YJR061W	P40355	935 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	ASN1	P49089	572 aa	Known RBP	2.29	□□□□□ -2.04
RIC1	YLR039C	GND2	P53319	492 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	YSA1	Q01976	231 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	NGL2	Q03264	515 aa	Known RBP	2.29	□□□□□ -2.04
RIC1	YLR039C	CIR2	Q08822	631 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	MRH1	Q12117	320 aa	Predicted RBP	2.29	□□□□□ -2.04
RIC1	YLR039C	ACF2	Q12168	779 aa		2.29	□□□□□ -2.04
RIC1	YLR039C	COX1	P00401	534 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	MTG2	P38860	518 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	IST3	P40565	148 aa	Predicted RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	THI6	P41835	540 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	YGL117W	P53133	265 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	ARE2	P53629	642 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	MTG1	Q03151	367 aa	Predicted RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	RAD33	Q04231	177 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	MDM20	Q12387	796 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	YOR019W	Q99248	730 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	AI5_ALPHA	Q9ZZX1	630 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	CPA2	P03965	1118 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	AAC1	P04710	309 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	RRP43	P25359	394 aa	Predicted RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	MOH1	P38191	138 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	ERC1	P38767	581 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	IRC24	P40580	263 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	NGL3	Q03210	505 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	RAD30	Q04049	632 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	RVB2	Q12464	471 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	CET1	O13297	549 aa	Predicted RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	INH1	P01097	85 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	RPL19A	P0CX82	189 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	RPL19B	P0CX83	189 aa	Predicted RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	GCD7	P32502	381 aa	Predicted RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	ALY1	P36117	915 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	SAP1	P39955	897 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	PFK26	P40433	827 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	SKP2	P42843	763 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	YFL015C	P43578	164 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	PIL1	P53252	339 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	COQ6	P53318	479 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	BSC5	P53755	489 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	INN1	P53901	409 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	TMN2	Q04562	672 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	HRD3	Q05787	833 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	MRI1	Q06489	411 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	HBT1	Q07653	1046 aa	Known RBP	2.28	□□□□□ -2.04
RIC1	YLR039C	LCB4	Q12246	624 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	SUT2	Q12286	268 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	ZPS1	Q12512	249 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	YBR255C-A	Q3E776	120 aa		2.28	□□□□□ -2.04
RIC1	YLR039C	SIN3	P22579	1536 aa		2.28	□□□□□ -2.05
RIC1	YLR039C	KAR3	P17119	729 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	KIN3	P22209	435 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	LOT5	P34234	306 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	MTH1	P35198	433 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	LNP1	P38878	278 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	NOC2	P39744	710 aa	Known RBP	2.27	□□□□□ -2.05
RIC1	YLR039C	DUO1	P53168	247 aa	Known RBP	2.27	□□□□□ -2.05
RIC1	YLR039C	TGS1	Q12052	315 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	SWT1	Q12104	458 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	PDE1	P22434	369 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	LRE1	P25579	583 aa	Known RBP	2.27	□□□□□ -2.05
RIC1	YLR039C	JHD1	P40034	492 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	LYS4	P49367	693 aa	Predicted RBP	2.27	□□□□□ -2.05
RIC1	YLR039C	WAR1	Q03631	944 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	TDA9	Q04545	1251 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	ARG7	Q04728	441 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	GTB1	Q04924	702 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	YDL073W	Q07454	984 aa		2.27	□□□□□ -2.05
RIC1	YLR039C	SEM1	O94742	89 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	CHO2	P05374	869 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	PCT1	P13259	424 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	YCK1	P23291	538 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	PIH1	P38768	344 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	UBP7	P40453	1071 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	SWP82	P43554	623 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	ASE1	P50275	885 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	VPS4	P52917	437 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	YGL036W	P53185	909 aa	Predicted RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	SKM1	Q12469	655 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	RTP1	Q12751	981 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	TPK2	P06245	380 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	CDC31	P06704	161 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	WHI2	P12611	486 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	KGD2	P19262	463 aa	Predicted RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	YJU2	P28320	278 aa	Predicted RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	YMC1	P32331	307 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	NUP120	P35729	1037 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	NPR2	P39923	615 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	DSD1	P53095	428 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	VPS73	P53142	486 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	LCL3	P53153	274 aa		2.26	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 160.9 ms