RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W ARO9P38840 513 aaPredicted RBP3.48□□□□□ -1.85
RPF1YHR088W EAF5P39995 279 aa3.48□□□□□ -1.85
RPF1YHR088W PCL6P40038 420 aa3.48□□□□□ -1.85
RPF1YHR088W SAD1P43589 448 aa3.48□□□□□ -1.85
RPF1YHR088W YRB30P53107 440 aaPredicted RBP3.48□□□□□ -1.85
RPF1YHR088W TRS31Q03337 283 aa3.48□□□□□ -1.85
RPF1YHR088W YBR255C-AQ3E776 120 aa3.48□□□□□ -1.85
RPF1YHR088W YFL068WP0CX99 160 aa3.47□□□□□ -1.85
RPF1YHR088W YLL066W-AP0CY00 160 aa3.47□□□□□ -1.85
RPF1YHR088W YLL067W-AP0CY01 160 aa3.47□□□□□ -1.85
RPF1YHR088W PDE1P22434 369 aa3.47□□□□□ -1.85
RPF1YHR088W HEM12P32347 362 aaPredicted RBP3.47□□□□□ -1.85
RPF1YHR088W GSH1P32477 678 aa3.47□□□□□ -1.85
RPF1YHR088W SIP1P32578 815 aa3.47□□□□□ -1.85
RPF1YHR088W YLF2P38746 405 aa3.47□□□□□ -1.85
RPF1YHR088W BET4Q00618 327 aa3.47□□□□□ -1.85
RPF1YHR088W YMR317WQ04893 1140 aa3.47□□□□□ -1.85
RPF1YHR088W THI3Q07471 609 aa3.47□□□□□ -1.85
RPF1YHR088W GPN2Q08726 347 aaPredicted RBP3.47□□□□□ -1.85
RPF1YHR088W LEA1Q08963 238 aaPredicted RBP3.47□□□□□ -1.85
RPF1YHR088W SKP2P42843 763 aa3.46□□□□□ -1.86
RPF1YHR088W ACS1Q01574 713 aa3.46□□□□□ -1.86
RPF1YHR088W CRF1Q04930 467 aa3.46□□□□□ -1.86
RPF1YHR088W CRD1Q07560 283 aa3.46□□□□□ -1.86
RPF1YHR088W PRE2P30656 287 aaKnown RBP3.45□□□□□ -1.86
RPF1YHR088W OCT1P35999 772 aa3.45□□□□□ -1.86
RPF1YHR088W VPS25P47142 202 aa3.45□□□□□ -1.86
RPF1YHR088W PUS4P48567 403 aaKnown RBP3.45□□□□□ -1.86
RPF1YHR088W UBP8P50102 471 aa3.45□□□□□ -1.86
RPF1YHR088W RTT103Q05543 409 aa3.45□□□□□ -1.86
RPF1YHR088W ECI1Q05871 280 aa3.45□□□□□ -1.86
RPF1YHR088W DBP10Q12389 995 aaKnown RBP3.45□□□□□ -1.86
RPF1YHR088W PPZ1P26570 692 aa3.44□□□□□ -1.86
RPF1YHR088W ERC1P38767 581 aa3.44□□□□□ -1.86
RPF1YHR088W POL31P46957 487 aa3.44□□□□□ -1.86
RPF1YHR088W EAF7P53911 425 aaKnown RBP3.44□□□□□ -1.86
RPF1YHR088W VPS64Q03944 604 aa3.44□□□□□ -1.86
RPF1YHR088W PDR8Q06149 701 aa3.44□□□□□ -1.86
RPF1YHR088W SLX4Q12098 748 aa3.44□□□□□ -1.86
RPF1YHR088W NOP1P15646 327 aaKnown RBP3.43□□□□□ -1.86
RPF1YHR088W SDS22P36047 338 aa3.43□□□□□ -1.86
RPF1YHR088W FMP46P36141 133 aaKnown RBP3.43□□□□□ -1.86
RPF1YHR088W UBP7P40453 1071 aa3.43□□□□□ -1.86
RPF1YHR088W QRI7P43122 407 aa3.43□□□□□ -1.86
RPF1YHR088W CAC2Q04199 468 aa3.43□□□□□ -1.86
RPF1YHR088W SWF1Q04629 336 aa3.43□□□□□ -1.86
RPF1YHR088W PIG1Q06216 648 aa3.43□□□□□ -1.86
RPF1YHR088W KAR1P11927 433 aa3.42□□□□□ -1.86
RPF1YHR088W TGL1P34163 548 aa3.42□□□□□ -1.86
RPF1YHR088W YBR071WP38243 211 aa3.42□□□□□ -1.86
RPF1YHR088W BZZ1P38822 633 aa3.42□□□□□ -1.86
RPF1YHR088W ARB1P40024 610 aaKnown RBP3.42□□□□□ -1.86
RPF1YHR088W CDC1P40986 491 aa3.42□□□□□ -1.86
RPF1YHR088W FMP42Q04991 504 aa3.42□□□□□ -1.86
RPF1YHR088W POS5Q06892 414 aa3.42□□□□□ -1.86
RPF1YHR088W TAH18Q12181 623 aa3.42□□□□□ -1.86
RPF1YHR088W VAS1P07806 1104 aaKnown RBP3.41□□□□□ -1.86
RPF1YHR088W LAC1P28496 418 aa3.41□□□□□ -1.86
RPF1YHR088W HES1P35843 434 aa3.41□□□□□ -1.86
RPF1YHR088W VPS41P38959 992 aa3.41□□□□□ -1.86
RPF1YHR088W PHM8P40025 321 aa3.41□□□□□ -1.86
RPF1YHR088W ECM38Q05902 660 aaPredicted RBP3.41□□□□□ -1.86
RPF1YHR088W AIM6Q07716 390 aa3.41□□□□□ -1.86
RPF1YHR088W MCH4Q08268 501 aa3.41□□□□□ -1.86
RPF1YHR088W PHO3P24031 467 aa3.4□□□□□ -1.87
RPF1YHR088W MNN2P38069 597 aa3.4□□□□□ -1.87
RPF1YHR088W UBP12P39538 1254 aa3.4□□□□□ -1.87
RPF1YHR088W YND1P40009 630 aa3.4□□□□□ -1.87
RPF1YHR088W NPA3P47122 385 aa3.4□□□□□ -1.87
RPF1YHR088W AAD4Q07747 329 aa3.4□□□□□ -1.87
RPF1YHR088W RPS7AP26786 190 aaKnown RBP3.39□□□□□ -1.87
RPF1YHR088W FUN12P39730 1002 aaKnown RBP3.39□□□□□ -1.87
RPF1YHR088W SAW1P39735 261 aa3.39□□□□□ -1.87
RPF1YHR088W HOS2P53096 452 aaPredicted RBP3.39□□□□□ -1.87
RPF1YHR088W YNL034WP53963 612 aa3.39□□□□□ -1.87
RPF1YHR088W ECM16Q04217 1267 aaKnown RBP3.39□□□□□ -1.87
RPF1YHR088W RPL42AP0CX27 106 aaKnown RBP3.38□□□□□ -1.87
RPF1YHR088W RPL42BP0CX28 106 aaKnown RBP3.38□□□□□ -1.87
RPF1YHR088W CDC23P16522 626 aa3.38□□□□□ -1.87
RPF1YHR088W SCS2P40075 244 aaKnown RBP3.38□□□□□ -1.87
RPF1YHR088W UBX6P47049 396 aa3.38□□□□□ -1.87
RPF1YHR088W YPR003CP53394 754 aa3.38□□□□□ -1.87
RPF1YHR088W DOS2P54858 310 aa3.38□□□□□ -1.87
RPF1YHR088W DIG1Q03063 452 aaKnown RBP3.38□□□□□ -1.87
RPF1YHR088W YMR254CQ04838 102 aa3.38□□□□□ -1.87
RPF1YHR088W ARP9Q05123 467 aa3.38□□□□□ -1.87
RPF1YHR088W YMR230W-AQ3E7B5 62 aa3.38□□□□□ -1.87
RPF1YHR088W PSP1P50896 841 aaKnown RBP3.37□□□□□ -1.87
RPF1YHR088W ESF2P53743 316 aaKnown RBP3.37□□□□□ -1.87
RPF1YHR088W YPL108WQ02872 168 aaPredicted RBP3.37□□□□□ -1.87
RPF1YHR088W GTB1Q04924 702 aa3.37□□□□□ -1.87
RPF1YHR088W PHM6Q05637 104 aa3.37□□□□□ -1.87
RPF1YHR088W MRP2P10663 115 aaPredicted RBP3.36□□□□□ -1.87
RPF1YHR088W SDS24P38314 527 aa3.36□□□□□ -1.87
RPF1YHR088W CUL3P53202 744 aa3.36□□□□□ -1.87
RPF1YHR088W CNM67P53865 581 aaKnown RBP3.36□□□□□ -1.87
RPF1YHR088W CRZ1P53968 678 aa3.36□□□□□ -1.87
RPF1YHR088W IZH1Q03419 316 aa3.36□□□□□ -1.87
RPF1YHR088W SND1Q04007 877 aa3.36□□□□□ -1.87
RPF1YHR088W BAG7Q12128 409 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 159.9 ms