RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C MRS6P32864 603 aaKnown RBP3.32□□□□□ -1.88
SWC4YGR002C RPF2P36160 344 aaKnown RBP3.32□□□□□ -1.88
SWC4YGR002C APD1P38281 316 aa3.32□□□□□ -1.88
SWC4YGR002C FSH1P38777 243 aaKnown RBP3.32□□□□□ -1.88
SWC4YGR002C PSF2P40359 213 aa3.32□□□□□ -1.88
SWC4YGR002C SNM1P40993 198 aa3.32□□□□□ -1.88
SWC4YGR002C SKP2P42843 763 aa3.32□□□□□ -1.88
SWC4YGR002C NPA3P47122 385 aa3.32□□□□□ -1.88
SWC4YGR002C YGR079WP53249 370 aa3.32□□□□□ -1.88
SWC4YGR002C ARC35P53731 342 aaKnown RBP3.32□□□□□ -1.88
SWC4YGR002C YPL071CQ02864 156 aa3.32□□□□□ -1.88
SWC4YGR002C TRS130Q03660 1102 aa3.32□□□□□ -1.88
SWC4YGR002C CIA1Q05583 330 aa3.32□□□□□ -1.88
SWC4YGR002C BSP1Q06604 576 aa3.32□□□□□ -1.88
SWC4YGR002C YOR389WQ08912 624 aa3.32□□□□□ -1.88
SWC4YGR002C FRE7Q12333 620 aa3.32□□□□□ -1.88
SWC4YGR002C YBR255C-AQ3E776 120 aa3.32□□□□□ -1.88
SWC4YGR002C PGK1P00560 416 aaKnown RBP3.31□□□□□ -1.88
SWC4YGR002C NUC1P08466 329 aa3.31□□□□□ -1.88
SWC4YGR002C KGD2P19262 463 aaPredicted RBP3.31□□□□□ -1.88
SWC4YGR002C YCL049CP25577 312 aa3.31□□□□□ -1.88
SWC4YGR002C URK1P27515 501 aa3.31□□□□□ -1.88
SWC4YGR002C PTH2P34222 208 aa3.31□□□□□ -1.88
SWC4YGR002C FUN12P39730 1002 aaKnown RBP3.31□□□□□ -1.88
SWC4YGR002C SAP185P40856 1058 aa3.31□□□□□ -1.88
SWC4YGR002C CIR1P42940 261 aa3.31□□□□□ -1.88
SWC4YGR002C BST1P43571 1029 aa3.31□□□□□ -1.88
SWC4YGR002C TLG1Q03322 224 aa3.31□□□□□ -1.88
SWC4YGR002C COX1P00401 534 aa3.3□□□□□ -1.88
SWC4YGR002C ILV2P07342 687 aaKnown RBP3.3□□□□□ -1.88
SWC4YGR002C DPB3P27344 201 aa3.3□□□□□ -1.88
SWC4YGR002C FUI1P38196 639 aa3.3□□□□□ -1.88
SWC4YGR002C VBA2P38358 474 aaKnown RBP3.3□□□□□ -1.88
SWC4YGR002C NOC2P39744 710 aaKnown RBP3.3□□□□□ -1.88
SWC4YGR002C RAD26P40352 1085 aa3.3□□□□□ -1.88
SWC4YGR002C UBX6P47049 396 aa3.3□□□□□ -1.88
SWC4YGR002C BPL1P48445 690 aaPredicted RBP3.3□□□□□ -1.88
SWC4YGR002C MTG1Q03151 367 aaPredicted RBP3.3□□□□□ -1.88
SWC4YGR002C VMS1Q04311 632 aaKnown RBP3.3□□□□□ -1.88
SWC4YGR002C TPO3Q06451 622 aa3.3□□□□□ -1.88
SWC4YGR002C SPN1Q06505 410 aaPredicted RBP3.3□□□□□ -1.88
SWC4YGR002C IRC3Q06683 689 aa3.3□□□□□ -1.88
SWC4YGR002C BUD21Q08492 214 aaPredicted RBP3.3□□□□□ -1.88
SWC4YGR002C RVB2Q12464 471 aaKnown RBP3.3□□□□□ -1.88
SWC4YGR002C YLR111WQ12528 110 aa3.3□□□□□ -1.88
SWC4YGR002C SES1P07284 462 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C URE2P23202 354 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C LAC1P28496 418 aa3.29□□□□□ -1.88
SWC4YGR002C BEM3P32873 1128 aa3.29□□□□□ -1.88
SWC4YGR002C BLI1P35727 113 aa3.29□□□□□ -1.88
SWC4YGR002C KES1P35844 434 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C VPS24P36095 224 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C MRPL36P36531 177 aa3.29□□□□□ -1.88
SWC4YGR002C FTH1P38310 465 aa3.29□□□□□ -1.88
SWC4YGR002C IMD2P38697 523 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C IES5P40060 125 aa3.29□□□□□ -1.88
SWC4YGR002C NET1P47035 1189 aa3.29□□□□□ -1.88
SWC4YGR002C IMD3P50095 523 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C GLO1P50107 326 aa3.29□□□□□ -1.88
SWC4YGR002C MRPL13Q02204 264 aa3.29□□□□□ -1.88
SWC4YGR002C GIR2Q03768 265 aaPredicted RBP3.29□□□□□ -1.88
SWC4YGR002C SNU56Q03782 492 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C TMA64Q04600 565 aaKnown RBP3.29□□□□□ -1.88
SWC4YGR002C RAD34Q06665 692 aa3.29□□□□□ -1.88
SWC4YGR002C BIK1P11709 440 aa3.28□□□□□ -1.88
SWC4YGR002C PWP2P25635 923 aaKnown RBP3.28□□□□□ -1.88
SWC4YGR002C IFA38P38286 347 aa3.28□□□□□ -1.88
SWC4YGR002C LTP1P40347 161 aa3.28□□□□□ -1.88
SWC4YGR002C SMK1P41808 388 aa3.28□□□□□ -1.88
SWC4YGR002C BNA3P47039 444 aaKnown RBP3.28□□□□□ -1.88
SWC4YGR002C YAT1P80235 687 aa3.28□□□□□ -1.88
SWC4YGR002C SEC5P89102 971 aa3.28□□□□□ -1.88
SWC4YGR002C GTR1Q00582 310 aa3.28□□□□□ -1.88
SWC4YGR002C GTB1Q04924 702 aa3.28□□□□□ -1.88
SWC4YGR002C YPL191CQ08930 360 aa3.28□□□□□ -1.88
SWC4YGR002C PRS5Q12265 496 aaKnown RBP3.28□□□□□ -1.88
SWC4YGR002C COX17Q12287 69 aa3.28□□□□□ -1.88
SWC4YGR002C PCD1Q12524 340 aa3.28□□□□□ -1.88
SWC4YGR002C ATP2P00830 511 aaKnown RBP3.27□□□□□ -1.89
SWC4YGR002C TPK1P06244 397 aa3.27□□□□□ -1.89
SWC4YGR002C PET111P08468 800 aa3.27□□□□□ -1.89
SWC4YGR002C MTF2P10849 440 aa3.27□□□□□ -1.89
SWC4YGR002C RFA2P26754 273 aaKnown RBP3.27□□□□□ -1.89
SWC4YGR002C RAD16P31244 790 aa3.27□□□□□ -1.89
SWC4YGR002C GSH1P32477 678 aa3.27□□□□□ -1.89
SWC4YGR002C EXO84P38261 753 aa3.27□□□□□ -1.89
SWC4YGR002C YIL161WP40449 235 aaKnown RBP3.27□□□□□ -1.89
SWC4YGR002C YDR109CQ04585 715 aa3.27□□□□□ -1.89
SWC4YGR002C YAP7Q08182 245 aa3.27□□□□□ -1.89
SWC4YGR002C LYS21Q12122 440 aaKnown RBP3.27□□□□□ -1.89
SWC4YGR002C SPT7P35177 1332 aa3.27□□□□□ -1.89
SWC4YGR002C UBC1P21734 215 aaKnown RBP3.27□□□□□ -1.89
SWC4YGR002C NUP120P35729 1037 aa3.27□□□□□ -1.89
SWC4YGR002C HES1P35843 434 aa3.27□□□□□ -1.89
SWC4YGR002C NPR3P38742 1146 aa3.27□□□□□ -1.89
SWC4YGR002C BUD16P39988 312 aa3.27□□□□□ -1.89
SWC4YGR002C UBP7P40453 1071 aa3.27□□□□□ -1.89
SWC4YGR002C ULP2P40537 1034 aaPredicted RBP3.27□□□□□ -1.89
SWC4YGR002C CIN1P40987 1014 aa3.27□□□□□ -1.89
SWC4YGR002C NMD5P46970 1048 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms