RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W MRPL13Q02204 264 aa4.12□□□□□ -1.75
LSM4YER112W MTG1Q03151 367 aaPredicted RBP4.12□□□□□ -1.75
LSM4YER112W GTB1Q04924 702 aa4.12□□□□□ -1.75
LSM4YER112W YML053CQ04978 212 aa4.12□□□□□ -1.75
LSM4YER112W SPN1Q06505 410 aaPredicted RBP4.12□□□□□ -1.75
LSM4YER112W CYK3Q07533 885 aa4.12□□□□□ -1.75
LSM4YER112W RDL1Q12305 139 aaKnown RBP4.12□□□□□ -1.75
LSM4YER112W RVB2Q12464 471 aaKnown RBP4.12□□□□□ -1.75
LSM4YER112W NUC1P08466 329 aa4.11□□□□□ -1.75
LSM4YER112W MTF2P10849 440 aa4.11□□□□□ -1.75
LSM4YER112W NUP1P20676 1076 aa4.11□□□□□ -1.75
LSM4YER112W RRP43P25359 394 aaPredicted RBP4.11□□□□□ -1.75
LSM4YER112W RAD16P31244 790 aa4.11□□□□□ -1.75
LSM4YER112W NUP120P35729 1037 aa4.11□□□□□ -1.75
LSM4YER112W YBR138CP38277 524 aa4.11□□□□□ -1.75
LSM4YER112W SAP1P39955 897 aaKnown RBP4.11□□□□□ -1.75
LSM4YER112W ZAP1P47043 880 aa4.11□□□□□ -1.75
LSM4YER112W UBX6P47049 396 aa4.11□□□□□ -1.75
LSM4YER112W ATP23P53722 227 aa4.11□□□□□ -1.75
LSM4YER112W HRD3Q05787 833 aa4.11□□□□□ -1.75
LSM4YER112W BSP1Q06604 576 aa4.11□□□□□ -1.75
LSM4YER112W ATG23Q06671 453 aa4.11□□□□□ -1.75
LSM4YER112W SUL2Q12325 893 aa4.11□□□□□ -1.75
LSM4YER112W SSM4P40318 1319 aa4.11□□□□□ -1.75
LSM4YER112W APN1P22936 367 aa4.1□□□□□ -1.75
LSM4YER112W KES1P35844 434 aaKnown RBP4.1□□□□□ -1.75
LSM4YER112W FUI1P38196 639 aa4.1□□□□□ -1.75
LSM4YER112W VBA2P38358 474 aaKnown RBP4.1□□□□□ -1.75
LSM4YER112W ERC1P38767 581 aa4.1□□□□□ -1.75
LSM4YER112W VPS8P39702 1274 aa4.1□□□□□ -1.75
LSM4YER112W SMK1P41808 388 aa4.1□□□□□ -1.75
LSM4YER112W YGR021WP53212 290 aa4.1□□□□□ -1.75
LSM4YER112W YGR079WP53249 370 aa4.1□□□□□ -1.75
LSM4YER112W ARC35P53731 342 aaKnown RBP4.1□□□□□ -1.75
LSM4YER112W CIA1Q05583 330 aa4.1□□□□□ -1.75
LSM4YER112W CSR1Q06705 408 aaKnown RBP4.1□□□□□ -1.75
LSM4YER112W PNO1Q99216 274 aaKnown RBP4.1□□□□□ -1.75
LSM4YER112W ILV2P07342 687 aaKnown RBP4.09□□□□□ -1.75
LSM4YER112W NCP1P16603 691 aaKnown RBP4.09□□□□□ -1.75
LSM4YER112W UBC1P21734 215 aaKnown RBP4.09□□□□□ -1.75
LSM4YER112W URK1P27515 501 aa4.09□□□□□ -1.75
LSM4YER112W YIL161WP40449 235 aaKnown RBP4.09□□□□□ -1.75
LSM4YER112W ERR3P42222 437 aa4.09□□□□□ -1.75
LSM4YER112W SAE2P46946 345 aa4.09□□□□□ -1.75
LSM4YER112W TAM41P53230 385 aa4.09□□□□□ -1.75
LSM4YER112W YPL071CQ02864 156 aa4.09□□□□□ -1.75
LSM4YER112W CIR2Q08822 631 aa4.09□□□□□ -1.75
LSM4YER112W TPK1P06244 397 aa4.08□□□□□ -1.76
LSM4YER112W SES1P07284 462 aaKnown RBP4.08□□□□□ -1.76
LSM4YER112W SPO16P17122 198 aa4.08□□□□□ -1.76
LSM4YER112W MBR1P23493 339 aa4.08□□□□□ -1.76
LSM4YER112W LAC1P28496 418 aa4.08□□□□□ -1.76
LSM4YER112W PSY4P38193 441 aa4.08□□□□□ -1.76
LSM4YER112W FTH1P38310 465 aa4.08□□□□□ -1.76
LSM4YER112W UME6P39001 836 aa4.08□□□□□ -1.76
LSM4YER112W DJP1P40564 432 aa4.08□□□□□ -1.76
LSM4YER112W IML2P47031 731 aa4.08□□□□□ -1.76
LSM4YER112W YRB30P53107 440 aaPredicted RBP4.08□□□□□ -1.76
LSM4YER112W YAT1P80235 687 aa4.08□□□□□ -1.76
LSM4YER112W VAM6Q07468 1049 aa4.08□□□□□ -1.76
LSM4YER112W YOR389WQ08912 624 aa4.08□□□□□ -1.76
LSM4YER112W Q0010Q9ZZX9 128 aa4.08□□□□□ -1.76
LSM4YER112W PFK2P16862 959 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
LSM4YER112W LRE1P25579 583 aaKnown RBP4.07□□□□□ -1.76
LSM4YER112W RPT3P33298 428 aaKnown RBP4.07□□□□□ -1.76
LSM4YER112W HES1P35843 434 aa4.07□□□□□ -1.76
LSM4YER112W SNO3P43544 222 aa4.07□□□□□ -1.76
LSM4YER112W NPA3P47122 385 aa4.07□□□□□ -1.76
LSM4YER112W GTR1Q00582 310 aa4.07□□□□□ -1.76
LSM4YER112W TPO3Q06451 622 aa4.07□□□□□ -1.76
LSM4YER112W SWT1Q12104 458 aa4.07□□□□□ -1.76
LSM4YER112W BAG7Q12128 409 aa4.07□□□□□ -1.76
LSM4YER112W RTC1Q08281 1341 aa4.06□□□□□ -1.76
LSM4YER112W CET1O13297 549 aaPredicted RBP4.06□□□□□ -1.76
LSM4YER112W COX1P00401 534 aa4.06□□□□□ -1.76
LSM4YER112W ATP2P00830 511 aaKnown RBP4.06□□□□□ -1.76
LSM4YER112W ILS1P09436 1072 aaKnown RBP4.06□□□□□ -1.76
LSM4YER112W BEM3P32873 1128 aa4.06□□□□□ -1.76
LSM4YER112W TEF4P36008 412 aaKnown RBP4.06□□□□□ -1.76
LSM4YER112W BUD16P39988 312 aa4.06□□□□□ -1.76
LSM4YER112W PHM8P40025 321 aa4.06□□□□□ -1.76
LSM4YER112W ULP2P40537 1034 aaPredicted RBP4.06□□□□□ -1.76
LSM4YER112W CTF18P49956 741 aa4.06□□□□□ -1.76
LSM4YER112W ASE1P50275 885 aa4.06□□□□□ -1.76
LSM4YER112W YPL068CQ02749 293 aa4.06□□□□□ -1.76
LSM4YER112W ECM16Q04217 1267 aaKnown RBP4.06□□□□□ -1.76
LSM4YER112W TDA9Q04545 1251 aa4.06□□□□□ -1.76
LSM4YER112W RAD34Q06665 692 aa4.06□□□□□ -1.76
LSM4YER112W LYS21Q12122 440 aaKnown RBP4.06□□□□□ -1.76
LSM4YER112W YLR111WQ12528 110 aa4.06□□□□□ -1.76
LSM4YER112W TRX2P22803 104 aaKnown RBP4.05□□□□□ -1.76
LSM4YER112W URE2P23202 354 aaKnown RBP4.05□□□□□ -1.76
LSM4YER112W PTC6P25646 442 aa4.05□□□□□ -1.76
LSM4YER112W RGT1P32862 1170 aa4.05□□□□□ -1.76
LSM4YER112W KAP123P40069 1113 aaKnown RBP4.05□□□□□ -1.76
LSM4YER112W CSL4P53859 292 aaPredicted RBP4.05□□□□□ -1.76
LSM4YER112W ERG13P54839 491 aaKnown RBP4.05□□□□□ -1.76
LSM4YER112W YDR109CQ04585 715 aa4.05□□□□□ -1.76
LSM4YER112W LEA1Q08963 238 aaPredicted RBP4.05□□□□□ -1.76
LSM4YER112W PRS5Q12265 496 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms