RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN2	YDR443C	HER1	Q12276	1246 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	APM4	Q99186	491 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	CDC24	P11433	854 aa	Predicted RBP	2.74	□□□□□ -1.97
SSN2	YDR443C	DBP3	P20447	523 aa	Known RBP	2.74	□□□□□ -1.97
SSN2	YDR443C	CLB3	P24870	427 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	CWH43	P25618	953 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	PRO1	P32264	428 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	MSN4	P33749	630 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	COY1	P34237	679 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	PEX32	P38292	413 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	YFL054C	P43549	646 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	COG1	P53079	417 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	REG1	Q00816	1014 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	GCR2	Q01722	534 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	JIP4	Q03361	876 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	UFO1	Q04511	668 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	SSL1	Q04673	461 aa	Predicted RBP	2.74	□□□□□ -1.97
SSN2	YDR443C	ROY1	Q04847	553 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	CHS5	Q12114	671 aa	Known RBP	2.74	□□□□□ -1.97
SSN2	YDR443C	YPR015C	Q12531	247 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	YOR019W	Q99248	730 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	RRP5	Q05022	1729 aa	Known RBP	2.74	□□□□□ -1.97
SSN2	YDR443C	TUB2	P02557	457 aa	Known RBP	2.74	□□□□□ -1.97
SSN2	YDR443C	YCR051W	P25631	222 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	PHO91	P27514	894 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	TRK2	P28584	889 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	SPT23	P35210	1082 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	SWH1	P35845	1188 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	HEL1	P36113	551 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	YSW1	P38280	609 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	RGD1	P38339	666 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	MAF1	P41910	395 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	IRC5	P43610	853 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	NUP85	P46673	744 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	HAP5	Q02516	242 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	SPP1	Q03012	353 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	RSB1	Q08417	382 aa		2.74	□□□□□ -1.97
SSN2	YDR443C	CET1	O13297	549 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	ARG80	P07249	177 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	PCK1	P10963	549 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	DAP2	P18962	818 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	ADE2	P21264	571 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	SAC6	P32599	642 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	YKL151C	P36059	337 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	YHL017W	P38745	532 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	SMF1	P38925	575 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	VID30	P53076	958 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	YGR054W	P53235	642 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	BRE5	P53741	515 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	ARX1	Q03862	593 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	GRX6	Q12438	231 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	ADF1	Q2V2Q1	113 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	RFA1	P22336	621 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	PAP1	P29468	568 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	ARP2	P32381	391 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	KDX1	P36005	433 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	WSS1	P38838	269 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	FLC2	P39719	783 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	JHD1	P40034	492 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SSN2	YDR443C	AAD14	P42884	376 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SSN2	YDR443C	YJL171C	P46992	396 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	NOP15	P53927	220 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	YMR210W	Q03649	449 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	ECM18	Q04623	453 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	RTN1	Q04947	295 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	YLR407W	Q06070	228 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	KAP95	Q06142	861 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	ALG6	Q12001	544 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	RCN2	Q12044	265 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	YOR022C	Q12204	715 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	YLR149C	Q99296	730 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	STE2	D6VTK4	431 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	MST1	P07236	462 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	HTS1	P07263	546 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	SWI6	P09959	803 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	AFT1	P22149	690 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	PRD1	P25375	712 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	URA7	P28274	579 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	YEL043W	P32618	956 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	MIC60	P36112	540 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	MRPL37	P36532	105 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	REI1	P38344	393 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	LIA1	P47120	325 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	HXT16	P47185	567 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	RHO5	P53879	331 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	ECM22	Q05958	814 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	DIB1	Q06819	143 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	APC2	Q12440	853 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	IKI3	Q06706	1349 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	PRC1	P00729	532 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	TPK2	P06245	380 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	MSS116	P15424	664 aa	Known RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	SIR1	P21691	654 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	OCA4	P25366	362 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	HMX1	P32339	317 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	ASF2	P32448	525 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN2	YDR443C	COT1	P32798	439 aa		2.73	□□□□□ -1.97
SSN2	YDR443C	CUE2	P36075	443 aa	Known RBP	2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 581.3 ms