RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 UBXN4Q92575 508 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
CLN6-215ENST00000636674 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
CLN6-215ENST00000636674 SRPRBQ9Y5M8 271 aaKnown RBP16.65■□□□□ 0.26
CLN6-215ENST00000636674 LAMB2P55268 1798 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 UBE2Q2LH0YL09 131 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 FOXN1O15353 648 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
CLN6-215ENST00000636674 SPECC1LQ69YQ0 1117 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
CLN6-215ENST00000636674 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
CLN6-215ENST00000636674 CEP131Q9UPN4 1083 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 ATP8B1O43520 1251 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
CLN6-215ENST00000636674 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.25
CLN6-215ENST00000636674 SLC5A1P13866 664 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
CLN6-215ENST00000636674 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 MAGEB6Q8N7X4 407 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 MNS1Q8NEH6 495 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 SMARCE1Q969G3 411 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 NFE2L3Q9Y4A8 694 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 THSD7AQ9UPZ6 1657 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 BCL9O00512 1426 aa16.64■□□□□ 0.25
CLN6-215ENST00000636674 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
CLN6-215ENST00000636674 IGSF3O75054 1194 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
CLN6-215ENST00000636674 FMR1Q06787 632 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLN6-215ENST00000636674 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 CRACR2BQ8N4Y2 399 aaPredicted RBP16.63■□□□□ 0.25
CLN6-215ENST00000636674 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 WTAPQ15007 396 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 NACAP1Q9BZK3 213 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 ARMT1Q9H993 441 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 SERTAD1Q9UHV2 236 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
CLN6-215ENST00000636674 POLR2DO15514 142 aaKnown RBP16.62■□□□□ 0.25
CLN6-215ENST00000636674 URI1O94763 535 aaPredicted RBP16.62■□□□□ 0.25
CLN6-215ENST00000636674 PLCD1P51178 756 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 GRIN1Q05586 938 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 PPP2R5BQ15173 497 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 ZNF34Q8IZ26 560 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
CLN6-215ENST00000636674 SPATA31A1Q5TZJ5 1347 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 NPHP1O15259 732 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 EVA1CP58658 441 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 TMCO3Q6UWJ1 677 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 MRFAP1Q9Y605 127 aa16.62■□□□□ 0.25
CLN6-215ENST00000636674 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 ERICH2A1L162 156 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 NR1I3Q14994 352 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 MED15Q96RN5 788 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 CARD6Q9BX69 1037 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 RNF26Q9BY78 433 aaPredicted RBP16.61■□□□□ 0.25
CLN6-215ENST00000636674 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLN6-215ENST00000636674 PCDHB6Q9Y5E3 794 aa16.61■□□□□ 0.25
CLN6-215ENST00000636674 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 IL6STP40189 918 aaPredicted RBP16.6■□□□□ 0.25
CLN6-215ENST00000636674 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 KIFC2Q96AC6 838 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 PANX2Q96RD6 677 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 ZBTB1Q9Y2K1 713 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 WNK3Q9BYP7 1800 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 CASQ1P31415 396 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 PLA2G4AP47712 749 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 TDO2P48775 406 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 SEPT12Q8IYM1 358 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 LCORLQ8N3X6 602 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
CLN6-215ENST00000636674 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
CLN6-215ENST00000636674 SEMA3EO15041 775 aa16.59■□□□□ 0.25
CLN6-215ENST00000636674 CDK11BP21127 795 aaKnown RBP16.59■□□□□ 0.25
CLN6-215ENST00000636674 NR5A1Q13285 461 aa16.59■□□□□ 0.25
CLN6-215ENST00000636674 FAM98CQ17RN3 349 aaKnown RBP16.59■□□□□ 0.25
CLN6-215ENST00000636674 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
CLN6-215ENST00000636674 RSRC2Q7L4I2 434 aaKnown RBP16.59■□□□□ 0.25
CLN6-215ENST00000636674 APTXQ7Z2E3 356 aaKnown RBP16.59■□□□□ 0.25
CLN6-215ENST00000636674 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
CLN6-215ENST00000636674 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
CLN6-215ENST00000636674 DUOX1Q9NRD9 1551 aa16.59■□□□□ 0.25
CLN6-215ENST00000636674 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms