RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 LAMA2P24043 3122 aaKnown RBP12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 PDS5AQ29RF7 1337 aaKnown RBP12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 MCAMP43121 646 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 BACE1P56817 501 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 GSTO1P78417 241 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 SLFN5Q08AF3 891 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 GPR142Q7Z601 462 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 TGFBRAP1Q8WUH2 860 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 RBPJLQ9UBG7 517 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 PALD1Q9ULE6 856 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 EYSQ5T1H1 3165 aa12.96□□□□□ -0.33
SPTAN1-220ENST00000630147 COL2A1P02458 1487 aaPredicted RBP12.96□□□□□ -0.34
SPTAN1-220ENST00000630147 LDHCP07864 332 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 COL6A1P12109 1028 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 ERVK-24P63145 666 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 LHX8Q68G74 356 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 CRACR2BQ8N4Y2 399 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 SOCS4Q8WXH5 440 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 TRIM34Q9BYJ4 488 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 FLRT1Q9NZU1 646 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 AKAP2Q9Y2D5 859 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
SPTAN1-220ENST00000630147 MYH1P12882 1939 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 CAPN2P17655 700 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 RGS2P41220 211 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 ZBTB21Q9ULJ3 1066 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 TNNQ9UQP3 1299 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
SPTAN1-220ENST00000630147 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 FLT1P17948 1338 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 ASNSP08243 561 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 CNGA1P29973 690 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 MAPK4P31152 587 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 DYNLL1P63167 89 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 MORN1Q5T089 497 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 USP6NLQ92738 828 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 APBA2Q99767 749 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 WDR18Q9BV38 432 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 TBC1D2Q9BYX2 928 aa12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 HERC5Q9UII4 1024 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-220ENST00000630147 CNMDO75829 334 aa12.92□□□□□ -0.34
SPTAN1-220ENST00000630147 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
SPTAN1-220ENST00000630147 HOXA7P31268 230 aaPredicted RBP12.92□□□□□ -0.34
SPTAN1-220ENST00000630147 FEZ1Q99689 392 aa12.92□□□□□ -0.34
SPTAN1-220ENST00000630147 LBHD1Q9BQE6 289 aaPredicted RBP12.92□□□□□ -0.34
SPTAN1-220ENST00000630147 API5Q9BZZ5 524 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-220ENST00000630147 PNMA6EA0A0J9YXQ4 647 aa12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 GH2P01242 217 aa12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 XRCC5P13010 732 aaKnown RBP12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 CYP2C19P33261 490 aa12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 TTC39AQ5SRH9 613 aa12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 GJC2Q5T442 439 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 PRDM5Q9NQX1 630 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 ATP11BQ9Y2G3 1177 aa12.91□□□□□ -0.34
SPTAN1-220ENST00000630147 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
SPTAN1-220ENST00000630147 BAG3O95817 575 aa12.9□□□□□ -0.34
SPTAN1-220ENST00000630147 MIGA1Q8NAN2 632 aa12.9□□□□□ -0.34
SPTAN1-220ENST00000630147 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
SPTAN1-220ENST00000630147 DBNDD2Q9BQY9 259 aa12.9□□□□□ -0.34
SPTAN1-220ENST00000630147 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-220ENST00000630147 RLFQ13129 1914 aa12.9□□□□□ -0.35
SPTAN1-220ENST00000630147 ZBTB22O15209 634 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 CYP2E1P05181 493 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 RTP1P59025 263 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 G3BP1Q13283 466 aaKnown RBP eCLIP12.89□□□□□ -0.352e-8■■□□□ 14.4
SPTAN1-220ENST00000630147 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 ZNF697Q5TEC3 545 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 MFSD14CQ5VZR4 134 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 TRMT44Q8IYL2 757 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 NPLOC4Q8TAT6 608 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 ACER1Q8TDN7 264 aa12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 DHX36Q9H2U1 1008 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-220ENST00000630147 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms