RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 MMP1P03956 469 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 APPP05067 770 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DNAI1Q9UI46 699 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MYH6P13533 1939 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TAF1P21675 1872 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TM4SF1P30408 202 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NDUFA8P51970 172 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MNS1Q8NEH6 495 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 IFIT3O14879 490 aaKnown RBP12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 KCNQ2O43526 872 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CALM1P0DP23 149 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CALM2P0DP24 149 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CALM3P0DP25 149 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 HNRNPH2P55795 449 aaKnown RBP12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NLRP12P59046 1061 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TOMM22Q9NS69 142 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 IMPACTQ9P2X3 320 aa12.46□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.415e-7■■■□□ 15.3
SENP3-EIF4A1-201ENST00000614237 CT47A1Q5JQC4 288 aaPredicted RBP12.46□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ZNF397Q8NF99 534 aaPredicted RBP12.46□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SENP2Q9HC62 589 aa12.46□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ROBO3Q96MS0 1386 aa12.46□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 FUT2Q10981 343 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 WTAPQ15007 396 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NT5DC1Q5TFE4 455 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ADGRA1Q86SQ6 560 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CREBRFQ8IUR6 639 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PDILTQ8N807 584 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ESR2Q92731 530 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 DDAH1O94760 285 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ZNF202O95125 648 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 KCNJ6P48051 423 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TEX35Q5T0J7 233 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NOSTRINQ8IVI9 506 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ATP8A2Q9NTI2 1148 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 WDHD1O75717 1129 aaPredicted RBP12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CYP7A1P22680 504 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 RILPL1Q5EBL4 403 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 FANCBQ8NB91 859 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NSUN4Q96CB9 384 aaKnown RBP12.45□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CTIFO43310 598 aaKnown RBP12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ADRA2BP18089 450 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TRIM29Q14134 588 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 RTN1Q16799 776 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 OSBPL5Q9H0X9 879 aaPredicted RBP12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PRKAB2O43741 272 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TDO2P48775 406 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 LRRC8AQ8IWT6 810 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ERICH2A1L162 156 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PFKFB1P16118 471 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PAXBP1Q9Y5B6 917 aa12.44□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PHACTR2O75167 634 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SLU7O95391 586 aaKnown RBP12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 UBXN4Q92575 508 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ZSCAN10Q96SZ4 725 aaPredicted RBP12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 QSER1Q2KHR3 1735 aa12.43□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PTPREP23469 700 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SETDB2Q96T68 719 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 LEMD3Q9Y2U8 911 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 MROH7-TTC4A0A0A0MT08 1334 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 BAZ2AQ9UIF9 1905 aaKnown RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TRIM66O15016 1216 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 LMAN1P49257 510 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms