RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SGPL1O95470 568 aa26.56■■□□□ 1.84
DDX39A-215ENST00000590696 HLA-DOAP06340 250 aa26.56■■□□□ 1.84
DDX39A-215ENST00000590696 SHROOM1Q2M3G4 852 aaPredicted RBP26.56■■□□□ 1.84
DDX39A-215ENST00000590696 TMOD4Q9NZQ9 345 aa26.56■■□□□ 1.84
DDX39A-215ENST00000590696 ERC1Q8IUD2 1116 aa26.55■■□□□ 1.84
DDX39A-215ENST00000590696 MAGEB6Q8N7X4 407 aa26.55■■□□□ 1.84
DDX39A-215ENST00000590696 MIGA1Q8NAN2 632 aa26.55■■□□□ 1.84
DDX39A-215ENST00000590696 ANTXR1Q9H6X2 564 aa26.55■■□□□ 1.84
DDX39A-215ENST00000590696 ZBED9Q6R2W3 1325 aa26.55■■□□□ 1.84
DDX39A-215ENST00000590696 AACSQ86V21 672 aa26.54■■□□□ 1.84
DDX39A-215ENST00000590696 GINM1Q9NU53 330 aa26.54■■□□□ 1.84
DDX39A-215ENST00000590696 DOCK3Q8IZD9 2030 aa26.54■■□□□ 1.84
DDX39A-215ENST00000590696 C19orf81C9J6K1 198 aa26.53■■□□□ 1.84
DDX39A-215ENST00000590696 USP17L10C9JJH3 530 aa26.53■■□□□ 1.84
DDX39A-215ENST00000590696 HOXA7P31268 230 aaPredicted RBP26.53■■□□□ 1.84
DDX39A-215ENST00000590696 USP5P45974 858 aa26.53■■□□□ 1.84
DDX39A-215ENST00000590696 IRX3P78415 501 aaPredicted RBP26.53■■□□□ 1.84
DDX39A-215ENST00000590696 HTATIP2Q9BUP3 242 aa26.53■■□□□ 1.84
DDX39A-215ENST00000590696 ZBTB21Q9ULJ3 1066 aa26.53■■□□□ 1.84
DDX39A-215ENST00000590696 FARP2O94887 1054 aaPredicted RBP26.52■■□□□ 1.84
DDX39A-215ENST00000590696 MAP3K12Q12852 859 aa26.52■■□□□ 1.84
DDX39A-215ENST00000590696 CERS3Q8IU89 383 aa26.52■■□□□ 1.84
DDX39A-215ENST00000590696 DEFB118Q96PH6 123 aa26.52■■□□□ 1.84
DDX39A-215ENST00000590696 P2RX7Q99572 595 aaKnown RBP26.52■■□□□ 1.84
DDX39A-215ENST00000590696 MORF4L1Q9UBU8 362 aa26.52■■□□□ 1.84
DDX39A-215ENST00000590696 TFRCP02786 760 aaKnown RBP26.51■■□□□ 1.83
DDX39A-215ENST00000590696 IL1RAPL2Q9NP60 686 aa26.51■■□□□ 1.83
DDX39A-215ENST00000590696 GJD2Q9UKL4 321 aa26.51■■□□□ 1.83
DDX39A-215ENST00000590696 FXR1P51114 621 aaKnown RBP eCLIP26.5■■□□□ 1.83
DDX39A-215ENST00000590696 HSP90AB4PQ58FF6 505 aa26.5■■□□□ 1.83
DDX39A-215ENST00000590696 PAK6Q9NQU5 681 aaPredicted RBP26.5■■□□□ 1.83
DDX39A-215ENST00000590696 MYH1P12882 1939 aa26.49■■□□□ 1.83
DDX39A-215ENST00000590696 HERVK_113P62684 666 aa26.49■■□□□ 1.83
DDX39A-215ENST00000590696 RHPN1Q8TCX5 695 aa26.49■■□□□ 1.83
DDX39A-215ENST00000590696 PEX10O60683 326 aa26.48■■□□□ 1.83
DDX39A-215ENST00000590696 GH2P01242 217 aa26.48■■□□□ 1.83
DDX39A-215ENST00000590696 MS4A1P11836 297 aa26.48■■□□□ 1.83
DDX39A-215ENST00000590696 CAPN2P17655 700 aa26.48■■□□□ 1.83
DDX39A-215ENST00000590696 TMED8Q6PL24 325 aaPredicted RBP26.48■■□□□ 1.83
DDX39A-215ENST00000590696 HMGCRP04035 888 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 TATDN1Q6P1N9 297 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 CHRDL2Q6WN34 429 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 GPRC5AQ8NFJ5 357 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.47■■□□□ 1.83
DDX39A-215ENST00000590696 TXNRD2Q9NNW7 524 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 EMILIN3Q9NT22 766 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 SERPINB13Q9UIV8 391 aa26.47■■□□□ 1.83
DDX39A-215ENST00000590696 USP17L2Q6R6M4 530 aa26.46■■□□□ 1.83
DDX39A-215ENST00000590696 TTC6Q86TZ1 520 aa26.46■■□□□ 1.83
DDX39A-215ENST00000590696 CRISPLD2Q9H0B8 497 aa26.46■■□□□ 1.83
DDX39A-215ENST00000590696 EHD4Q9H223 541 aa26.46■■□□□ 1.83
DDX39A-215ENST00000590696 APBB1O00213 710 aa26.45■■□□□ 1.82
DDX39A-215ENST00000590696 TTF1Q15361 905 aaPredicted RBP26.45■■□□□ 1.82
DDX39A-215ENST00000590696 RIOK1Q9BRS2 568 aaKnown RBP26.45■■□□□ 1.82
DDX39A-215ENST00000590696 RBPJLQ9UBG7 517 aa26.45■■□□□ 1.82
DDX39A-215ENST00000590696 NR2E3Q9Y5X4 410 aa26.45■■□□□ 1.82
DDX39A-215ENST00000590696 TRIM32Q13049 653 aa26.44■■□□□ 1.82
DDX39A-215ENST00000590696 RPAP2Q8IXW5 612 aaPredicted RBP26.44■■□□□ 1.82
DDX39A-215ENST00000590696 CLASRPQ8N2M8 674 aaKnown RBP26.44■■□□□ 1.82
DDX39A-215ENST00000590696 PLXNB2O15031 1838 aa26.44■■□□□ 1.82
DDX39A-215ENST00000590696 MAGEB6P1A0A0J9YX57 407 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 CYP2B6P20813 491 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 RAB3GAP1Q15042 981 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 ZYXQ15942 572 aaKnown RBP26.43■■□□□ 1.82
DDX39A-215ENST00000590696 Q3C1V9 767 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 CERKLQ49MI3 558 aaPredicted RBP26.43■■□□□ 1.82
DDX39A-215ENST00000590696 KIF1BPQ96EK5 621 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 PAGR1Q9BTK6 254 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 CEP290O15078 2479 aa26.43■■□□□ 1.82
DDX39A-215ENST00000590696 RPTORQ8N122 1335 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 PLCD1P51178 756 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 ERVK-9P63128 1117 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 ERVK-24P63145 666 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 ABCB5Q2M3G0 1257 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 SLC9C2Q5TAH2 1124 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 TRIB2Q92519 343 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 PAWRQ96IZ0 340 aaKnown RBP26.42■■□□□ 1.82
DDX39A-215ENST00000590696 FEZ1Q99689 392 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 NUDT12Q9BQG2 462 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 BCL11AQ9H165 835 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 HMX1Q9NP08 348 aaPredicted RBP26.42■■□□□ 1.82
DDX39A-215ENST00000590696 DDX19BQ9UMR2 479 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 COG6Q9Y2V7 657 aa26.42■■□□□ 1.82
DDX39A-215ENST00000590696 HMMRO75330 724 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 IFIT2P09913 472 aaKnown RBP26.41■■□□□ 1.82
DDX39A-215ENST00000590696 PDE6AP16499 860 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 MAPK4P31152 587 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 POTEEQ6S8J3 1075 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 SIRT2Q8IXJ6 389 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 GTF3C2Q8WUA4 911 aaPredicted RBP26.41■■□□□ 1.82
DDX39A-215ENST00000590696 C12orf42Q96LP6 360 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 DNAJC2Q99543 621 aaKnown RBP26.41■■□□□ 1.82
DDX39A-215ENST00000590696 ZBTB40Q9NUA8 1239 aa26.41■■□□□ 1.82
DDX39A-215ENST00000590696 RBM27Q9P2N5 1060 aaKnown RBP26.41■■□□□ 1.82
DDX39A-215ENST00000590696 GOLIM4O00461 696 aa26.4■■□□□ 1.82
DDX39A-215ENST00000590696 EVI5O60447 810 aa26.4■■□□□ 1.82
DDX39A-215ENST00000590696 POLR3DP05423 398 aaPredicted RBP26.4■■□□□ 1.82
DDX39A-215ENST00000590696 CCAR1Q8IX12 1150 aaKnown RBP26.4■■□□□ 1.82
DDX39A-215ENST00000590696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.4■■□□□ 1.82
DDX39A-215ENST00000590696 SOCS4Q8WXH5 440 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms