RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 ANKRD1Q15327 319 aa17.87■□□□□ 0.45
DDX39A-211ENST00000590239 SUPT20HL1Q3ZLR7 823 aa17.87■□□□□ 0.45
DDX39A-211ENST00000590239 NKX2-3Q8TAU0 364 aa17.87■□□□□ 0.45
DDX39A-211ENST00000590239 NMRK2Q9NPI5 230 aa17.87■□□□□ 0.45
DDX39A-211ENST00000590239 TSPY2A6NKD2 308 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 CCDC178Q5BJE1 867 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 NBPF12Q5TAG4 269 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-211ENST00000590239 DCAF15Q66K64 600 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 IQCA1Q86XH1 822 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 NEDD1Q8NHV4 660 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 UBAC1Q9BSL1 405 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 AGXT2Q9BYV1 514 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 TCP11L1Q9NUJ3 509 aa17.86■□□□□ 0.45
DDX39A-211ENST00000590239 FAM196BA6NMK8 535 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 TSPY3P0CV98 308 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 TSPY8P0CW00 308 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 HSPA6P17066 643 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 AK2P54819 239 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 FGD1P98174 961 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 CERKLQ49MI3 558 aaPredicted RBP17.85■□□□□ 0.45
DDX39A-211ENST00000590239 FAM47AQ5JRC9 791 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 Q6ZUG5 572 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 TCEANC2Q96MN5 208 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 PLIN4Q96Q06 1357 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 ZSCAN10Q96SZ4 725 aaPredicted RBP17.85■□□□□ 0.45
DDX39A-211ENST00000590239 CLEC11AQ9Y240 323 aa17.85■□□□□ 0.45
DDX39A-211ENST00000590239 POLR2AP24928 1970 aaKnown RBP17.84■□□□□ 0.45
DDX39A-211ENST00000590239 ADM5C9JUS6 153 aa17.84■□□□□ 0.45
DDX39A-211ENST00000590239 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
DDX39A-211ENST00000590239 TMEM67Q5HYA8 995 aa17.84■□□□□ 0.45
DDX39A-211ENST00000590239 USP48Q86UV5 1035 aa17.84■□□□□ 0.45
DDX39A-211ENST00000590239 TMTC2Q8N394 836 aa17.84■□□□□ 0.45
DDX39A-211ENST00000590239 IGDCC4Q8TDY8 1250 aa17.84■□□□□ 0.45
DDX39A-211ENST00000590239 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-211ENST00000590239 ANGEL1Q9UNK9 670 aaKnown RBP17.84■□□□□ 0.45
DDX39A-211ENST00000590239 ERICH2A1L162 156 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 SH2B2O14492 632 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-211ENST00000590239 SLURP2P0DP57 97 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 AKR1B1P15121 316 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 LIFRP42702 1097 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 TOB2Q14106 344 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-211ENST00000590239 PRAMEF18Q5VWM3 479 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 MIGA2Q7L4E1 593 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.44
DDX39A-211ENST00000590239 TNKSO95271 1327 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 IGKV6D-41A0A0C4DH26 115 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 PHF20L1A8MW92 1017 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 CD2BP2O95400 341 aaKnown RBP17.82■□□□□ 0.44
DDX39A-211ENST00000590239 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 POTEJP0CG39 1038 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 EVCP57679 992 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 BECN1Q14457 450 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 SEC23AQ15436 765 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 ABCB5Q2M3G0 1257 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 TMEM179Q6ZVK1 233 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 DGKHQ86XP1 1220 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 ENAHQ8N8S7 591 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-211ENST00000590239 ANKS1AQ92625 1134 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 BRF1Q92994 677 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 CDCA5Q96FF9 252 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.82■□□□□ 0.44
DDX39A-211ENST00000590239 GLIS2Q9BZE0 524 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-211ENST00000590239 LY9Q9HBG7 655 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 IL17RBQ9NRM6 502 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 GINM1Q9NU53 330 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 ZNF112Q9UJU3 913 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 MYH8P13535 1937 aa17.82■□□□□ 0.44
DDX39A-211ENST00000590239 NF2P35240 595 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 CAP2P40123 477 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 NOVP48745 357 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 WTAPQ15007 396 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 SGMS1Q86VZ5 419 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 HSCBQ8IWL3 235 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 ZSCAN31Q96LW9 406 aaPredicted RBP17.81■□□□□ 0.44
DDX39A-211ENST00000590239 ZKSCAN3Q9BRR0 538 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
DDX39A-211ENST00000590239 SSC5DA1L4H1 1573 aa17.81■□□□□ 0.44
DDX39A-211ENST00000590239 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
DDX39A-211ENST00000590239 NMT2O60551 498 aa17.8■□□□□ 0.44
DDX39A-211ENST00000590239 CTNND1O60716 968 aaKnown RBP17.8■□□□□ 0.44
DDX39A-211ENST00000590239 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
DDX39A-211ENST00000590239 MAP1SQ66K74 1059 aaPredicted RBP17.8■□□□□ 0.44
DDX39A-211ENST00000590239 TBC1D2Q9BYX2 928 aa17.8■□□□□ 0.44
DDX39A-211ENST00000590239 KANSL2Q9H9L4 492 aa17.8■□□□□ 0.44
DDX39A-211ENST00000590239 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
DDX39A-211ENST00000590239 MTMR4Q9NYA4 1195 aa17.8■□□□□ 0.44
DDX39A-211ENST00000590239 GREB1LQ9C091 1923 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-211ENST00000590239 K7ELQ4 463 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-211ENST00000590239 GH2P01242 217 aa17.79■□□□□ 0.44
DDX39A-211ENST00000590239 IFIT1BQ5T764 474 aaKnown RBP17.79■□□□□ 0.44
DDX39A-211ENST00000590239 RCSD1Q6JBY9 416 aa17.79■□□□□ 0.44
DDX39A-211ENST00000590239 ZNF274Q96GC6 653 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-211ENST00000590239 CEP95Q96GE4 821 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms