RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 IKBKBO14920 756 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 BCAMP50895 628 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 SPATA5Q8NB90 893 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 RTEL1Q9NZ71 1219 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 GOLGA6L9A6NEM1 432 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 MMP14P50281 582 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 CORO7P57737 925 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 AMIGO3Q86WK7 504 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 DEF6Q9H4E7 631 aa18.18■□□□□ 0.5
PPP6R1-204ENST00000587457 DDX60Q8IY21 1712 aaKnown RBP18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 ZNF202O95125 648 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 PDE6AP16499 860 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 STK38Q15208 465 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 GPATCH11Q8N954 259 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 HNRNPLLQ8WVV9 542 aaKnown RBP18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 LAMA4Q16363 1823 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 COL4A1P02462 1669 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 LRRC31Q6UY01 552 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 TOGARAM2Q6ZUX3 1019 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 LINC00301Q8NCQ3 95 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 CDC5LQ99459 802 aaKnown RBP18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 BAG1Q99933 345 aaPredicted RBP18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 MYH15Q9Y2K3 1946 aa18.17■□□□□ 0.5
PPP6R1-204ENST00000587457 CHMP4BP1P59074 171 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 CCDC12Q8WUD4 166 aaPredicted RBP18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 ANKZF1Q9H8Y5 726 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 SUGCTQ9HAC7 445 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 EIF3JO75822 258 aaKnown RBP18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 HSPA1LP34931 641 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 WWC2Q6AWC2 1192 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 NARFQ9UHQ1 456 aa18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 PUF60Q9UHX1 559 aaKnown RBP18.16■□□□□ 0.5
PPP6R1-204ENST00000587457 AFF2P51816 1311 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 AKAP11Q9UKA4 1901 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 WTIPA6NIX2 430 aaPredicted RBP18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 KARSQ15046 597 aaKnown RBP18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 ANKRD18AQ8IVF6 992 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 PDILTQ8N807 584 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 GPHNQ9NQX3 736 aaPredicted RBP18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 PSEN1P49768 467 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 SF3B3Q15393 1217 aaKnown RBP18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 SRGAP1Q7Z6B7 1085 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 ABCB6Q9NP58 842 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 L1RE1Q9UN81 338 aa18.15■□□□□ 0.5
PPP6R1-204ENST00000587457 BCORQ6W2J9 1755 aa18.14■□□□□ 0.5
PPP6R1-204ENST00000587457 ZNF213O14771 459 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 CUTAO60888 179 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 ZPR1O75312 459 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 APPP05067 770 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 E2F4Q16254 413 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 MAGEB6Q8N7X4 407 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 PNKPQ96T60 521 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 PLEKHA4Q9H4M7 779 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 THSD7AQ9UPZ6 1657 aa18.14■□□□□ 0.49
PPP6R1-204ENST00000587457 PHACTR2O75167 634 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 USP5P45974 858 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 MYL5Q02045 173 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 SETDB2Q96T68 719 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 IRX2Q9BZI1 471 aaPredicted RBP18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 RAB21Q9UL25 225 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 SPTLC2O15270 562 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 POLR3DP05423 398 aaPredicted RBP18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 KCNG4Q8TDN1 519 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 CELF1Q92879 486 aaKnown RBP18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 DESI2Q9BSY9 194 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 ATRNO75882 1429 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 ZNF831Q5JPB2 1677 aa18.13■□□□□ 0.49
PPP6R1-204ENST00000587457 STX10O60499 249 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 ERLIN1O75477 346 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 MAP3K12Q12852 859 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 CNNM3Q8NE01 707 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 CCDC102AQ96A19 550 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 FANCLQ9NW38 375 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 ADKP55263 362 aaKnown RBP18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 MSL3Q8N5Y2 521 aaKnown RBP18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 INTS13Q9NVM9 706 aa18.12■□□□□ 0.49
PPP6R1-204ENST00000587457 DENND2AQ9ULE3 1009 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms