RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 NBPF3Q9H094 633 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 PORCNQ9H237 461 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 AS3MTQ9HBK9 375 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 PIH1D3Q9NQM4 214 aaKnown RBP14.63□□□□□ -0.07
BRCA1-225ENST00000586385 PALD1Q9ULE6 856 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 ATAD5Q96QE3 1844 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 ASNSP08243 561 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
BRCA1-225ENST00000586385 SYN1P17600 705 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-225ENST00000586385 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
BRCA1-225ENST00000586385 CCL14Q16627 93 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 TNNI3KQ59H18 835 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 ATF7IPQ6VMQ6 1270 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 DHX36Q9H2U1 1008 aaKnown RBP14.62□□□□□ -0.07
BRCA1-225ENST00000586385 GPR108Q9NPR9 543 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 ZBTB21Q9ULJ3 1066 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 FPGT-TNNI3KV9GXZ4 949 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 COL6A3P12111 3177 aa14.62□□□□□ -0.07
BRCA1-225ENST00000586385 COL6A1P12109 1028 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 XRCC5P13010 732 aaKnown RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 MAGEA10P43363 369 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 ZAP70P43403 619 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 CACNB2Q08289 660 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 MORN1Q5T089 497 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 LHX8Q68G74 356 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 FOXP4Q8IVH2 680 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 GPRC5AQ8NFJ5 357 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 C11orf49Q9H6J7 331 aa14.61□□□□□ -0.07
BRCA1-225ENST00000586385 SAP30BPQ9UHR5 308 aaKnown RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
BRCA1-225ENST00000586385 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 CNMDO75829 334 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 CCND3P30281 292 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-225ENST00000586385 ERVK-9P63128 1117 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 ERVK-24P63145 666 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 TMEM57Q8N5G2 664 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 SLC17A8Q8NDX2 589 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 SSH3Q8TE77 659 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 NUDT12Q9BQG2 462 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
BRCA1-225ENST00000586385 TMOD4Q9NZQ9 345 aa14.6□□□□□ -0.07
BRCA1-225ENST00000586385 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
BRCA1-225ENST00000586385 C19orf81C9J6K1 198 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 BAG3O95817 575 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 PLCG2P16885 1265 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 TTC39AQ5SRH9 613 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 Q7L0L9 218 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 SOCS4Q8WXH5 440 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 ZNF512BQ96KM6 892 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-225ENST00000586385 MAST2Q6P0Q8 1798 aa14.59□□□□□ -0.07
BRCA1-225ENST00000586385 DLL1O00548 723 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 MAPK4P31152 587 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 LRRC26Q2I0M4 334 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 LRIT3Q3SXY7 679 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-225ENST00000586385 C12orf42Q96LP6 360 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 NOL10Q9BSC4 688 aaKnown RBP14.58□□□□□ -0.08
BRCA1-225ENST00000586385 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 GINM1Q9NU53 330 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
BRCA1-225ENST00000586385 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 IPO8O15397 1037 aaKnown RBP14.57□□□□□ -0.08
BRCA1-225ENST00000586385 GH2P01242 217 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 ZKSCAN1P17029 563 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-225ENST00000586385 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 GPR153Q6NV75 609 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 CRACR2BQ8N4Y2 399 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-225ENST00000586385 C1orf115Q9H7X2 142 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
BRCA1-225ENST00000586385 NDUFB9Q9Y6M9 179 aa14.57□□□□□ -0.08
BRCA1-225ENST00000586385 IGHA2P01877 340 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 CYP7A1P22680 504 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 RGS2P41220 211 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 CCDC158Q5M9N0 1113 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 PLEKHH3Q7Z736 793 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 TDHQ8IZJ6 230 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 DEFB123Q8N688 67 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 MIGA1Q8NAN2 632 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 ACER1Q8TDN7 264 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-225ENST00000586385 APBA2Q99767 749 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 ANTXR1Q9H6X2 564 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 MTMR10Q9NXD2 777 aa14.56□□□□□ -0.08
BRCA1-225ENST00000586385 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
BRCA1-225ENST00000586385 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
BRCA1-225ENST00000586385 RLBP1P12271 317 aa14.55□□□□□ -0.08
BRCA1-225ENST00000586385 GUCY1A2P33402 732 aa14.55□□□□□ -0.08
BRCA1-225ENST00000586385 EVX2Q03828 476 aa14.55□□□□□ -0.08
BRCA1-225ENST00000586385 MAP2K5Q13163 448 aa14.55□□□□□ -0.08
BRCA1-225ENST00000586385 PDE3AQ14432 1141 aa14.55□□□□□ -0.08
BRCA1-225ENST00000586385 ZYXQ15942 572 aaKnown RBP14.55□□□□□ -0.08
BRCA1-225ENST00000586385 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms