RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SPATA20Q8TB22 786 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 BAG1Q99933 345 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 DISP2A7MBM2 1401 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NHSL1Q5SYE7 1610 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 VWA3AA6NCI4 1184 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ACTN4O43707 911 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 STX10O60499 249 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 BCAMP50895 628 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ARHGAP29Q52LW3 1261 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 HSP90AA4PQ58FG1 418 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TC2NQ8N9U0 490 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 OXER1Q8TDS5 423 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CDK11BP21127 795 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NUTM2AQ8IVF1 878 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 IPO4Q8TEX9 1081 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 MED15Q96RN5 788 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 GOLGA6L9A6NEM1 432 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CLCN6P51797 869 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PPARAQ07869 468 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
CDK5RAP3-237ENST00000585163 BMS1Q14692 1282 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PPP2R5BQ15173 497 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TERF2Q15554 542 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PDILTQ8N807 584 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 MIGA1Q8NAN2 632 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 UBXN4Q92575 508 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CSRNP2Q9H175 543 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PLCH1Q4KWH8 1693 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 URI1O94763 535 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ERCC5P28715 1186 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SEC23AQ15436 765 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TRMT44Q8IYL2 757 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 LRP2BPQ9P2M1 347 aa16.22■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TADA3O75528 432 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PLCD1P51178 756 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 MNS1Q8NEH6 495 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 EFCAB8A8MWE9 144 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NR1I3Q14994 352 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ZNF771Q7L3S4 317 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SAMSN1Q9NSI8 373 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ANAPC4Q9UJX5 808 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 FHOD1Q9Y613 1164 aa16.21■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TNKSO95271 1327 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 ATP2B1P20020 1258 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 CT47A1Q5JQC4 288 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 ESR2Q92731 530 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 SHISA4Q96DD7 197 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 RAI14Q9P0K7 980 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 MYH6P13533 1939 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 RTL9Q8NET4 1388 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 A0A1B0GTH6 734 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 ADGRA1Q86SQ6 560 aa16.2■□□□□ 0.18
CDK5RAP3-237ENST00000585163 TRIM75PA6NK02 468 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 XBP1P17861 261 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 PKN1Q16512 942 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 TOGARAM2Q6ZUX3 1019 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 CCDC34Q96HJ3 373 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 CARD6Q9BX69 1037 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 ARGLU1Q9NWB6 273 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 CYP7A1P22680 504 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 MAP3K9P80192 1104 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 SDR42E1Q8WUS8 393 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 WDR24Q96S15 920 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 PHF20Q9BVI0 1012 aa16.19■□□□□ 0.18
CDK5RAP3-237ENST00000585163 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 MINDY4BA8MYZ0 360 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 ZRANB2O95218 330 aaKnown RBP eCLIP16.18■□□□□ 0.187e-19■□□□□ 10
CDK5RAP3-237ENST00000585163 TPM1P09493 284 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 GNG11P61952 73 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 CHRNDQ07001 517 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 FUT2Q10981 343 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 FAM177A1Q8N128 213 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 A0A087X0B3 334 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 FAM205CA6NFA0 338 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 EXOC5O00471 708 aa16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 PNMA6AP0CW24 399 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-237ENST00000585163 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms