RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LACTBP83111 547 aaPredicted RBP11.95□□□□□ -0.5
SKA2-208ENST00000583927 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
SKA2-208ENST00000583927 TICAM2Q86XR7 235 aa11.95□□□□□ -0.5
SKA2-208ENST00000583927 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
SKA2-208ENST00000583927 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
SKA2-208ENST00000583927 PTPN22Q9Y2R2 807 aa11.95□□□□□ -0.5
SKA2-208ENST00000583927 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
SKA2-208ENST00000583927 GREB1LQ9C091 1923 aaPredicted RBP11.95□□□□□ -0.5
SKA2-208ENST00000583927 TRIM75PA6NK02 468 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 C19orf81C9J6K1 198 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 GLRX3O76003 335 aaKnown RBP11.94□□□□□ -0.5
SKA2-208ENST00000583927 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
SKA2-208ENST00000583927 PRMT2P55345 433 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 CAP1Q01518 475 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 SPP2Q13103 211 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 PABPC4Q13310 644 aaKnown RBP eCLIP11.94□□□□□ -0.5
SKA2-208ENST00000583927 KIF22Q14807 665 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
SKA2-208ENST00000583927 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 PI4K2BQ8TCG2 481 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
SKA2-208ENST00000583927 PNMA3Q9UL41 463 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 ZBTB21Q9ULJ3 1066 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 PARP14Q460N5 1801 aa11.94□□□□□ -0.5
SKA2-208ENST00000583927 PLCD1P51178 756 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 BACE1P56817 501 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 GADL1Q6ZQY3 521 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.93□□□□□ -0.5
SKA2-208ENST00000583927 STAP2Q9UGK3 403 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 RLFQ13129 1914 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 MYH4Q9Y623 1939 aa11.93□□□□□ -0.5
SKA2-208ENST00000583927 USP17L10C9JJH3 530 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 MBD4O95243 580 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
SKA2-208ENST00000583927 MX1P20591 662 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 HOXA7P31268 230 aaPredicted RBP11.92□□□□□ -0.5
SKA2-208ENST00000583927 SHMT1P34896 483 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 JAG1P78504 1218 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 CERKLQ49MI3 558 aaPredicted RBP11.92□□□□□ -0.5
SKA2-208ENST00000583927 SMC5Q8IY18 1101 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 SDR42E1Q8WUS8 393 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 APPBP2Q92624 585 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 ARMC5Q96C12 935 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 C12orf42Q96LP6 360 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
SKA2-208ENST00000583927 ARMT1Q9H993 441 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 SWAP70Q9UH65 585 aa11.92□□□□□ -0.5
SKA2-208ENST00000583927 PLXNB2O15031 1838 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 GDF11O95390 407 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 GH2P01242 217 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
SKA2-208ENST00000583927 HMGCS2P54868 508 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 CCDC84Q86UT8 332 aaPredicted RBP11.91□□□□□ -0.5
SKA2-208ENST00000583927 STRBPQ96SI9 672 aaKnown RBP11.91□□□□□ -0.5
SKA2-208ENST00000583927 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
SKA2-208ENST00000583927 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
SKA2-208ENST00000583927 CPA4Q9UI42 421 aa11.91□□□□□ -0.5
SKA2-208ENST00000583927 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
SKA2-208ENST00000583927 CYP2C8P10632 490 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 GNAT2P19087 354 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 HOXD10P28358 340 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 USP14P54578 494 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 MTMR2Q13614 643 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 FAM110CQ1W6H9 321 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 SBK1Q52WX2 424 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 KIAA1683Q9H0B3 1180 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 CABP5Q9NP86 173 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 SRRDQ9UH36 339 aa11.9□□□□□ -0.5
SKA2-208ENST00000583927 ZNFX1Q9P2E3 1918 aaKnown RBP11.9□□□□□ -0.51
SKA2-208ENST00000583927 PRKAB2O43741 272 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 CHGBP05060 677 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 OSBPP22059 807 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 CTGFP29279 349 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 PSMC4P43686 418 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 PDE1AP54750 535 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 SHROOM1Q2M3G4 852 aaPredicted RBP11.89□□□□□ -0.51
SKA2-208ENST00000583927 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 NBPF11Q86T75 865 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
SKA2-208ENST00000583927 SMCR8Q8TEV9 937 aaPredicted RBP11.89□□□□□ -0.51
SKA2-208ENST00000583927 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
SKA2-208ENST00000583927 OSBP2Q969R2 916 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 CCDC17Q96LX7 622 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
SKA2-208ENST00000583927 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
SKA2-208ENST00000583927 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms