RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RIOK1Q9BRS2 568 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 IL25Q9H293 177 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 TTF2Q9UNY4 1162 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 RPAP1Q9BWH6 1393 aaPredicted RBP9.59□□□□□ -0.87
COPS3-215ENST00000578317 AKAP11Q9UKA4 1901 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 BAG3O95817 575 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 GNAT2P19087 354 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 GUCA2AQ02747 115 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 KIAA1211Q6ZU35 1233 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 ADGRA1Q86SQ6 560 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 ZNF589Q86UQ0 364 aaPredicted RBP9.59□□□□□ -0.87
COPS3-215ENST00000578317 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 MAP4K1Q92918 833 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 ZDHHC15Q96MV8 337 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 MXD3Q9BW11 206 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 USP26Q9BXU7 913 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 COL4A5P29400 1685 aa9.59□□□□□ -0.87
COPS3-215ENST00000578317 FER1L6Q2WGJ9 1857 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 MROH7-TTC4A0A0A0MT08 1334 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 PATL2C9JE40 543 aaKnown RBP9.58□□□□□ -0.88
COPS3-215ENST00000578317 GPAA1O43292 621 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 APLP1P51693 650 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 ZNF280AP59817 542 aaPredicted RBP9.58□□□□□ -0.88
COPS3-215ENST00000578317 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 C9orf131Q5VYM1 1079 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 GPC2Q8N158 579 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 OGFOD1Q8N543 542 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 TEKT1Q969V4 418 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
COPS3-215ENST00000578317 DSCC1Q9BVC3 393 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 LSG1Q9H089 658 aaKnown RBP9.58□□□□□ -0.88
COPS3-215ENST00000578317 WBP1LQ9NX94 342 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 TSR3Q9UJK0 312 aaKnown RBP9.58□□□□□ -0.88
COPS3-215ENST00000578317 HDAC9Q9UKV0 1011 aa9.58□□□□□ -0.88
COPS3-215ENST00000578317 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 M0R2C6 588 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 HSPD1P10809 573 aaKnown RBP9.57□□□□□ -0.88
COPS3-215ENST00000578317 IRF5Q13568 498 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 ALX1Q15699 326 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 APOBEC3HQ6NTF7 200 aaKnown RBP9.57□□□□□ -0.88
COPS3-215ENST00000578317 GIMAP6Q6P9H5 292 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
COPS3-215ENST00000578317 RNF181Q9P0P0 153 aa9.57□□□□□ -0.88
COPS3-215ENST00000578317 ACTN4O43707 911 aaKnown RBP9.56□□□□□ -0.88
COPS3-215ENST00000578317 MBD4O95243 580 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 CRKP46108 304 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 RHBDL3P58872 404 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
COPS3-215ENST00000578317 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 DAGLAQ9Y4D2 1042 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 F8W031 263 aaPredicted RBP9.56□□□□□ -0.88
COPS3-215ENST00000578317 FOXP2O15409 715 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 RBM25P49756 843 aaKnown RBP9.56□□□□□ -0.88
COPS3-215ENST00000578317 PTH1RQ03431 593 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 NECTIN1Q15223 517 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 CCDC129Q6ZRS4 1044 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 LCORLQ8N3X6 602 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 MIGA1Q8NAN2 632 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 KCNB2Q92953 911 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 IL17RAQ96F46 866 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 ZBED3Q96IU2 234 aaPredicted RBP9.56□□□□□ -0.88
COPS3-215ENST00000578317 NOL10Q9BSC4 688 aaKnown RBP9.56□□□□□ -0.88
COPS3-215ENST00000578317 ARMT1Q9H993 441 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 ATP8A2Q9NTI2 1148 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 AATFQ9NY61 560 aaKnown RBP eCLIP9.56□□□□□ -0.88
COPS3-215ENST00000578317 CTNNA3Q9UI47 895 aa9.56□□□□□ -0.88
COPS3-215ENST00000578317 ZMYM6O95789 1325 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 ZNF541Q9H0D2 1346 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 GSG1L2A8MUP6 293 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 FGAP02671 866 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 HSPA4P34932 840 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 BTDP43251 543 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 GMPSP49915 693 aaPredicted RBP9.55□□□□□ -0.88
COPS3-215ENST00000578317 SCNN1DP51172 638 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 DYNLL1P63167 89 aaKnown RBP9.55□□□□□ -0.88
COPS3-215ENST00000578317 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 KMT5BQ4FZB7 885 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 VPS53Q5VIR6 699 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 TSC1Q92574 1164 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 TRIM34Q9BYJ4 488 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 CRNKL1Q9BZJ0 848 aaKnown RBP9.55□□□□□ -0.88
COPS3-215ENST00000578317 NACAP1Q9BZK3 213 aa9.55□□□□□ -0.88
COPS3-215ENST00000578317 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
COPS3-215ENST00000578317 CNOT7Q9UIV1 285 aaKnown RBP9.55□□□□□ -0.88
COPS3-215ENST00000578317 GLTPD2A6NH11 291 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 ANAPC15P60006 121 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 PDE4CQ08493 712 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 DLGAP5Q15398 846 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 PUS10Q3MIT2 529 aaKnown RBP9.54□□□□□ -0.88
COPS3-215ENST00000578317 CFAP100Q494V2 611 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 FKBP1CQ5VVH2 108 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 CDC42EP5Q6NZY7 148 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 IFNL3Q8IZI9 196 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 PRMT6Q96LA8 375 aaPredicted RBP9.54□□□□□ -0.88
COPS3-215ENST00000578317 TBC1D32Q96NH3 1257 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 IDI2Q9BXS1 227 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms