RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
PRPF8-211ENST00000574728 CTSHP09668 335 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 CDC25BP30305 580 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 PCDH1Q08174 1060 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 IKBKEQ14164 716 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 TSNAXIP1Q2TAA8 658 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 LINC00114Q6XXX2 140 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 BEND7Q8N7W2 519 aaPredicted RBP6.73□□□□□ -1.33
PRPF8-211ENST00000574728 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
PRPF8-211ENST00000574728 NOP53Q9NZM5 478 aaKnown RBP6.73□□□□□ -1.33
PRPF8-211ENST00000574728 TTF2Q9UNY4 1162 aaKnown RBP6.73□□□□□ -1.33
PRPF8-211ENST00000574728 ALS2Q96Q42 1657 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 BCL9LQ86UU0 1499 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 CD163L1Q9NR16 1453 aa6.73□□□□□ -1.33
PRPF8-211ENST00000574728 QRICH2Q9H0J4 1663 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 LINC01387J3KSC0 135 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 ESRRAP11474 423 aaPredicted RBP6.72□□□□□ -1.33
PRPF8-211ENST00000574728 ARL4DP49703 201 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
PRPF8-211ENST00000574728 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 DTWD1Q8N5C7 304 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 ANKRD24Q8TF21 1146 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 WNT8BQ93098 351 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 SCARF2Q96GP6 870 aaPredicted RBP6.72□□□□□ -1.33
PRPF8-211ENST00000574728 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 CARD11Q9BXL7 1154 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 SRCAPQ6ZRS2 3230 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 ACEP12821 1306 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 AFF2P51816 1311 aa6.72□□□□□ -1.33
PRPF8-211ENST00000574728 SLIT2O94813 1529 aa6.71□□□□□ -1.33
PRPF8-211ENST00000574728 CRYBG1Q9Y4K1 1723 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 CPSF1Q10570 1443 aaKnown RBP6.71□□□□□ -1.34
PRPF8-211ENST00000574728 EIF4EBP3O60516 100 aaPredicted RBP6.71□□□□□ -1.34
PRPF8-211ENST00000574728 RECKO95980 971 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
PRPF8-211ENST00000574728 RAC1P63000 192 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 TXNDC11Q6PKC3 985 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 NPM2Q86SE8 214 aaKnown RBP6.71□□□□□ -1.34
PRPF8-211ENST00000574728 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
PRPF8-211ENST00000574728 BACH2Q9BYV9 841 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 CEP44Q9C0F1 390 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 OSGEPQ9NPF4 335 aa6.71□□□□□ -1.34
PRPF8-211ENST00000574728 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.34
PRPF8-211ENST00000574728 ARHGEF10O15013 1369 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 USP31Q70CQ4 1352 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 ATRNO75882 1429 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 PPIP5K1Q6PFW1 1433 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 ST20-MTHFSA0A0A6YYL1 179 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 SOX1O00570 391 aaPredicted RBP6.7□□□□□ -1.34
PRPF8-211ENST00000574728 FSCN2O14926 492 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 B3GALT4O96024 378 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 C19orf57Q0VDD7 668 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 ZNF423Q2M1K9 1284 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 MEI1Q5TIA1 1274 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 TPTE2Q6XPS3 522 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 KLHL23Q8NBE8 558 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 SLC7A3Q8WY07 619 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 SOX17Q9H6I2 414 aaPredicted RBP6.7□□□□□ -1.34
PRPF8-211ENST00000574728 SEC31BQ9NQW1 1179 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 TMEM39AQ9NV64 488 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 USP19O94966 1318 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 CNTNAP5Q8WYK1 1306 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 ABCA3Q99758 1704 aa6.7□□□□□ -1.34
PRPF8-211ENST00000574728 USP6P35125 1406 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 A0A0A0MRY4 1105 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 FAM83GA6ND36 823 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 FAAP100Q0VG06 881 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 TRIM28Q13263 835 aaKnown RBP6.69□□□□□ -1.34
PRPF8-211ENST00000574728 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 PRRT3Q5FWE3 981 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 NGDNQ8NEJ9 315 aaKnown RBP6.69□□□□□ -1.34
PRPF8-211ENST00000574728 C8orf37Q96NL8 207 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 PUS7Q96PZ0 661 aaKnown RBP6.69□□□□□ -1.34
PRPF8-211ENST00000574728 EVC2Q86UK5 1308 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 USP47Q96K76 1375 aa6.69□□□□□ -1.34
PRPF8-211ENST00000574728 CDK12Q9NYV4 1490 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 SCAMP3O14828 347 aaKnown RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 FBXO24O75426 580 aa6.68□□□□□ -1.34
PRPF8-211ENST00000574728 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 CCDC85BQ15834 202 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 ZNF772Q68DY9 489 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 SV2BQ7L1I2 683 aa6.68□□□□□ -1.34
PRPF8-211ENST00000574728 FMR1NBQ8N0W7 255 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 NECAB3Q96P71 396 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
PRPF8-211ENST00000574728 BRD4O60885 1362 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-211ENST00000574728 RGS12O14924 1447 aa6.67□□□□□ -1.34
PRPF8-211ENST00000574728 ITSN1Q15811 1721 aa6.67□□□□□ -1.34
PRPF8-211ENST00000574728 NRKQ7Z2Y5 1582 aa6.67□□□□□ -1.34
PRPF8-211ENST00000574728 RNF225M0QZC1 329 aaPredicted RBP6.67□□□□□ -1.34
PRPF8-211ENST00000574728 DEAF1O75398 565 aaPredicted RBP6.67□□□□□ -1.34
PRPF8-211ENST00000574728 GSTM4Q03013 218 aa6.67□□□□□ -1.34
PRPF8-211ENST00000574728 SUZ12Q15022 739 aaKnown RBP6.67□□□□□ -1.34
PRPF8-211ENST00000574728 LDLRAD1Q5T700 205 aa6.67□□□□□ -1.34
PRPF8-211ENST00000574728 MEX3CQ5U5Q3 659 aaKnown RBP6.67□□□□□ -1.34
PRPF8-211ENST00000574728 FBXO11Q86XK2 927 aa6.67□□□□□ -1.34
PRPF8-211ENST00000574728 NOC4LQ9BVI4 516 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms