RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.36
ABR-223ENST00000573895 TRIM75PA6NK02 468 aa17.27■□□□□ 0.36
ABR-223ENST00000573895 GLRX3O76003 335 aaKnown RBP17.27■□□□□ 0.36
ABR-223ENST00000573895 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.36
ABR-223ENST00000573895 SKAP1Q86WV1 359 aa17.27■□□□□ 0.36
ABR-223ENST00000573895 LCORLQ8N3X6 602 aa17.27■□□□□ 0.36
ABR-223ENST00000573895 DCP1AQ9NPI6 582 aaPredicted RBP17.27■□□□□ 0.36
ABR-223ENST00000573895 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.35
ABR-223ENST00000573895 MYH8P13535 1937 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
ABR-223ENST00000573895 SPP2Q13103 211 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
ABR-223ENST00000573895 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 SH3D19Q5HYK7 790 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 CD99L2Q8TCZ2 262 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 EFCC1Q9HA90 598 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.26■□□□□ 0.35
ABR-223ENST00000573895 AGTPBP1Q9UPW5 1226 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 HPS5Q9UPZ3 1129 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 TRIM17Q9Y577 477 aa17.26■□□□□ 0.35
ABR-223ENST00000573895 MBD4O95243 580 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 GNRH1P01148 92 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
ABR-223ENST00000573895 PLCD1P51178 756 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 GABPAQ06546 454 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 GADL1Q6ZQY3 521 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 PI4K2BQ8TCG2 481 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 SDR42E1Q8WUS8 393 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 ZBTB21Q9ULJ3 1066 aa17.25■□□□□ 0.35
ABR-223ENST00000573895 CENPFP49454 3210 aa17.24■□□□□ 0.35
ABR-223ENST00000573895 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
ABR-223ENST00000573895 BACE1P56817 501 aa17.24■□□□□ 0.35
ABR-223ENST00000573895 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
ABR-223ENST00000573895 PABPC4Q13310 644 aaKnown RBP eCLIP17.24■□□□□ 0.35
ABR-223ENST00000573895 KIF22Q14807 665 aa17.24■□□□□ 0.35
ABR-223ENST00000573895 CCDC84Q86UT8 332 aaPredicted RBP17.24■□□□□ 0.35
ABR-223ENST00000573895 PUS7LQ9H0K6 701 aaKnown RBP17.24■□□□□ 0.35
ABR-223ENST00000573895 PNMA3Q9UL41 463 aa17.24■□□□□ 0.35
ABR-223ENST00000573895 MGAMO43451 1857 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 RNF113AO15541 343 aaKnown RBP17.23■□□□□ 0.35
ABR-223ENST00000573895 GDF11O95390 407 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 SHMT1P34896 483 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 JAG1P78504 1218 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
ABR-223ENST00000573895 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 APPBP2Q92624 585 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 PTPN22Q9Y2R2 807 aa17.23■□□□□ 0.35
ABR-223ENST00000573895 USP17L10C9JJH3 530 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 CHGBP05060 677 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 BCRP11274 1271 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 RGS19P49795 217 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 HMGCS2P54868 508 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 PRMT2P55345 433 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 SWAP70Q9UH65 585 aa17.22■□□□□ 0.35
ABR-223ENST00000573895 PRKAB2O43741 272 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 GH2P01242 217 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 CYP2C8P10632 490 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 CAP1Q01518 475 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 STRBPQ96SI9 672 aaKnown RBP17.21■□□□□ 0.35
ABR-223ENST00000573895 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 CPA4Q9UI42 421 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
ABR-223ENST00000573895 GNAT2P19087 354 aa17.2■□□□□ 0.34
ABR-223ENST00000573895 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
ABR-223ENST00000573895 MTMR2Q13614 643 aa17.2■□□□□ 0.34
ABR-223ENST00000573895 TREML2Q5T2D2 321 aa17.2■□□□□ 0.34
ABR-223ENST00000573895 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
ABR-223ENST00000573895 OSBP2Q969R2 916 aa17.2■□□□□ 0.34
ABR-223ENST00000573895 TMOD4Q9NZQ9 345 aa17.2■□□□□ 0.34
ABR-223ENST00000573895 OSBPP22059 807 aa17.19■□□□□ 0.34
ABR-223ENST00000573895 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
ABR-223ENST00000573895 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
ABR-223ENST00000573895 USP17L2Q6R6M4 530 aa17.19■□□□□ 0.34
ABR-223ENST00000573895 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
ABR-223ENST00000573895 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
ABR-223ENST00000573895 ZSWIM8A7E2V4 1837 aa17.19■□□□□ 0.34
ABR-223ENST00000573895 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 USP17L21D6R901 530 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 GSPT1P15170 499 aaKnown RBP17.18■□□□□ 0.34
ABR-223ENST00000573895 SDSP20132 328 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 HOXD10P28358 340 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 USP14P54578 494 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 SBK1Q52WX2 424 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 EVI5LQ96CN4 794 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
ABR-223ENST00000573895 ARPP21Q9UBL0 812 aaPredicted RBP17.18■□□□□ 0.34
ABR-223ENST00000573895 KIAA0100Q14667 2235 aaKnown RBP17.17■□□□□ 0.34
ABR-223ENST00000573895 GSG1L2A8MUP6 293 aa17.17■□□□□ 0.34
ABR-223ENST00000573895 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms