RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CRBNQ96SW2 442 aa11□□□□□ -0.65
NDE1-207ENST00000573203 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
NDE1-207ENST00000573203 PAG1Q9NWQ8 432 aa11□□□□□ -0.65
NDE1-207ENST00000573203 PI4KBQ9UBF8 816 aa11□□□□□ -0.65
NDE1-207ENST00000573203 SAP30BPQ9UHR5 308 aaKnown RBP11□□□□□ -0.65
NDE1-207ENST00000573203 HERC5Q9UII4 1024 aaKnown RBP11□□□□□ -0.65
NDE1-207ENST00000573203 KCNH4Q9UQ05 1017 aa11□□□□□ -0.65
NDE1-207ENST00000573203 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
NDE1-207ENST00000573203 ZHX2Q9Y6X8 837 aa11□□□□□ -0.65
NDE1-207ENST00000573203 SIPA1L1O43166 1804 aa11□□□□□ -0.65
NDE1-207ENST00000573203 PHIPQ8WWQ0 1821 aa11□□□□□ -0.65
NDE1-207ENST00000573203 MYH7P12883 1935 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 CXCL11O14625 94 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 HLA-DOAP06340 250 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 PDE6AP16499 860 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 SP3Q02447 781 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 CRACR2BQ8N4Y2 399 aaPredicted RBP10.99□□□□□ -0.65
NDE1-207ENST00000573203 EDC3Q96F86 508 aaKnown RBP10.99□□□□□ -0.65
NDE1-207ENST00000573203 ERO1AQ96HE7 468 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 GPATCH3Q96I76 525 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 HAUS7Q99871 368 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 ZCCHC17Q9NP64 241 aaKnown RBP10.99□□□□□ -0.65
NDE1-207ENST00000573203 PALD1Q9ULE6 856 aa10.99□□□□□ -0.65
NDE1-207ENST00000573203 PTPRFP10586 1907 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 ANKRD23Q86SG2 305 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 CD99L2Q8TCZ2 262 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.98□□□□□ -0.658e-8■■■■□ 25.7
NDE1-207ENST00000573203 ECHDC1Q9NTX5 307 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 AFG3L2Q9Y4W6 797 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 NAV1Q8NEY1 1877 aa10.98□□□□□ -0.65
NDE1-207ENST00000573203 TRIM75PA6NK02 468 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 PDHXO00330 501 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 TLR2O60603 784 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 CAP2P40123 477 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 SLC4A8Q2Y0W8 1093 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 GADL1Q6ZQY3 521 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 FASTKD5Q7L8L6 764 aaKnown RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 CCDC84Q86UT8 332 aaPredicted RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 FOXP4Q8IVH2 680 aaPredicted RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 RIOK1Q9BRS2 568 aaKnown RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 CRNKL1Q9BZJ0 848 aaKnown RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.97□□□□□ -0.65
NDE1-207ENST00000573203 TRIM17Q9Y577 477 aa10.97□□□□□ -0.65
NDE1-207ENST00000573203 A0A0G2JLL6 359 aaPredicted RBP10.96□□□□□ -0.65
NDE1-207ENST00000573203 TCRBV5S4A2TA0A5A2 114 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 ADD2P35612 726 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 MOGSQ13724 837 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 RRP1BQ14684 758 aaKnown RBP10.96□□□□□ -0.65
NDE1-207ENST00000573203 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 ZSCAN25Q6NSZ9 544 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 FBXO46Q6PJ61 603 aaPredicted RBP10.96□□□□□ -0.65
NDE1-207ENST00000573203 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 PRRT2Q7Z6L0 340 aaPredicted RBP10.96□□□□□ -0.65
NDE1-207ENST00000573203 TTC6Q86TZ1 520 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 HS6ST3Q8IZP7 471 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 HPS5Q9UPZ3 1129 aa10.96□□□□□ -0.65
NDE1-207ENST00000573203 USP17L5A8MUK1 530 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 GDF11O95390 407 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
NDE1-207ENST00000573203 SPP2Q13103 211 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 KIF22Q14807 665 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 TSHZ3Q63HK5 1081 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 GPAT2Q6NUI2 795 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 METTL16Q86W50 562 aaKnown RBP10.95□□□□□ -0.66
NDE1-207ENST00000573203 LCORLQ8N3X6 602 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 PARK7Q99497 189 aaKnown RBP10.95□□□□□ -0.66
NDE1-207ENST00000573203 DNAJC18Q9H819 358 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 AS3MTQ9HBK9 375 aa10.95□□□□□ -0.66
NDE1-207ENST00000573203 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
NDE1-207ENST00000573203 MBD4O95243 580 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 ASNSP08243 561 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 UBE3CQ15386 1083 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 EHD4Q9H223 541 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 GINM1Q9NU53 330 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 MCM9Q9NXL9 1143 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 CPA4Q9UI42 421 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 SERPINB13Q9UIV8 391 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
NDE1-207ENST00000573203 BAZ2AQ9UIF9 1905 aaKnown RBP10.94□□□□□ -0.66
NDE1-207ENST00000573203 LOC285556D6RIA3 1793 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 ERC2O15083 957 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 CYP2C8P10632 490 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 HMGCS2P54868 508 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 ANKRD45Q5TZF3 282 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 PROCA1Q8NCQ7 364 aaPredicted RBP10.93□□□□□ -0.66
NDE1-207ENST00000573203 SDR42E1Q8WUS8 393 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 WDR18Q9BV38 432 aa10.93□□□□□ -0.66
NDE1-207ENST00000573203 TMEM121BQ9BXQ6 578 aaPredicted RBP10.93□□□□□ -0.66
NDE1-207ENST00000573203 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms