RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 MYH1P12882 1939 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 USP17L10C9JJH3 530 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 CCL5P13501 91 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 USP5P45974 858 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 GJA8P48165 433 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 KIF1BPQ96EK5 621 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 RNF208Q9H0X6 261 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 ASCC2Q9H1I8 757 aaPredicted RBP14.26□□□□□ -0.13
PRPF8-206ENST00000572723 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 SAP30BPQ9UHR5 308 aaKnown RBP14.26□□□□□ -0.13
PRPF8-206ENST00000572723 MAST2Q6P0Q8 1798 aa14.26□□□□□ -0.13
PRPF8-206ENST00000572723 RAB11FIP3O75154 756 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 JAG1P78504 1218 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 TTC6Q86TZ1 520 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF8-206ENST00000572723 COG6Q9Y2V7 657 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 NDUFB9Q9Y6M9 179 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 SIPA1L1O43166 1804 aa14.25□□□□□ -0.13
PRPF8-206ENST00000572723 GDF11O95390 407 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 IFIT2P09913 472 aaKnown RBP14.24□□□□□ -0.13
PRPF8-206ENST00000572723 MTMR2Q13614 643 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 TATDN1Q6P1N9 297 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 EHD4Q9H223 541 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 MORF4L1Q9UBU8 362 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 SERPINB13Q9UIV8 391 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 RCAN3Q9UKA8 241 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 ZBTB21Q9ULJ3 1066 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 LOC285556D6RIA3 1793 aa14.24□□□□□ -0.13
PRPF8-206ENST00000572723 SGPL1O95470 568 aa14.23□□□□□ -0.13
PRPF8-206ENST00000572723 IRX3P78415 501 aaPredicted RBP14.23□□□□□ -0.13
PRPF8-206ENST00000572723 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
PRPF8-206ENST00000572723 SHISA4Q96DD7 197 aa14.23□□□□□ -0.13
PRPF8-206ENST00000572723 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
PRPF8-206ENST00000572723 UNC93B1Q9H1C4 597 aa14.23□□□□□ -0.13
PRPF8-206ENST00000572723 GJD2Q9UKL4 321 aa14.23□□□□□ -0.13
PRPF8-206ENST00000572723 MAGEB6P1A0A0J9YX57 407 aa14.22□□□□□ -0.13
PRPF8-206ENST00000572723 APBB1O00213 710 aa14.22□□□□□ -0.13
PRPF8-206ENST00000572723 INHAP05111 366 aa14.22□□□□□ -0.13
PRPF8-206ENST00000572723 ELNP15502 786 aa14.22□□□□□ -0.13
PRPF8-206ENST00000572723 CERKLQ49MI3 558 aaPredicted RBP14.22□□□□□ -0.13
PRPF8-206ENST00000572723 HABP4Q5JVS0 413 aaKnown RBP14.22□□□□□ -0.13
PRPF8-206ENST00000572723 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
PRPF8-206ENST00000572723 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
PRPF8-206ENST00000572723 U2AF1L4Q8WU68 220 aaKnown RBP14.22□□□□□ -0.13
PRPF8-206ENST00000572723 RIOK1Q9BRS2 568 aaKnown RBP14.22□□□□□ -0.13
PRPF8-206ENST00000572723 GH2P01242 217 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 PDE6AP16499 860 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 HERVK_113P62684 666 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 PDE3AQ14432 1141 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 SHROOM1Q2M3G4 852 aaPredicted RBP14.21□□□□□ -0.13
PRPF8-206ENST00000572723 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 GTF3C2Q8WUA4 911 aaPredicted RBP14.21□□□□□ -0.13
PRPF8-206ENST00000572723 CRNKL1Q9BZJ0 848 aaKnown RBP14.21□□□□□ -0.13
PRPF8-206ENST00000572723 CABP5Q9NP86 173 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 EMILIN3Q9NT22 766 aa14.21□□□□□ -0.13
PRPF8-206ENST00000572723 GOLIM4O00461 696 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
PRPF8-206ENST00000572723 POLR3DP05423 398 aaPredicted RBP14.2□□□□□ -0.14
PRPF8-206ENST00000572723 PLCD1P51178 756 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 DPF3Q92784 378 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 C12orf42Q96LP6 360 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 HTATIP2Q9BUP3 242 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 PAK6Q9NQU5 681 aaPredicted RBP14.2□□□□□ -0.14
PRPF8-206ENST00000572723 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
PRPF8-206ENST00000572723 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
PRPF8-206ENST00000572723 TCRBV5S4A2TA0A5A2 114 aa14.19□□□□□ -0.14
PRPF8-206ENST00000572723 ATP5JP18859 108 aa14.19□□□□□ -0.14
PRPF8-206ENST00000572723 USP14P54578 494 aa14.19□□□□□ -0.14
PRPF8-206ENST00000572723 ABCB5Q2M3G0 1257 aa14.19□□□□□ -0.14
PRPF8-206ENST00000572723 DNAJC2Q99543 621 aaKnown RBP14.19□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L15C9J2P7 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L13C9JLJ4 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L11C9JVI0 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L18D6R9N7 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L22D6RA61 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L17D6RBQ6 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L19D6RCP7 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L20D6RJB6 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 H0YGN5 161 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 FARP2O94887 1054 aaPredicted RBP14.18□□□□□ -0.14
PRPF8-206ENST00000572723 HMGCRP04035 888 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
PRPF8-206ENST00000572723 MAPK4P31152 587 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 SHMT1P34896 483 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 GABPAQ06546 454 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 USP17L24Q0WX57 530 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 RAB3GAP1Q15042 981 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 Q3C1V9 767 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 DEFB118Q96PH6 123 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 NUDT12Q9BQG2 462 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 KIAA1683Q9H0B3 1180 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 CRISPLD2Q9H0B8 497 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 BOLA2Q9H3K6 86 aa14.18□□□□□ -0.14
PRPF8-206ENST00000572723 TXNRD2Q9NNW7 524 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms