RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ASNSP08243 561 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 BCRP11274 1271 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 WDR18Q9BV38 432 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 TBC1D2Q9BYX2 928 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 SERPINB13Q9UIV8 391 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 ZBTB21Q9ULJ3 1066 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 AGTPBP1Q9UPW5 1226 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 MGAMO43451 1857 aa30.4■■■□□ 2.46
FANCA-228ENST00000567943 PRKAB2O43741 272 aa30.39■■■□□ 2.46
FANCA-228ENST00000567943 HMGCS2P54868 508 aa30.39■■■□□ 2.46
FANCA-228ENST00000567943 UBE3CQ15386 1083 aa30.39■■■□□ 2.46
FANCA-228ENST00000567943 TRIM34Q9BYJ4 488 aa30.39■■■□□ 2.46
FANCA-228ENST00000567943 DCP1AQ9NPI6 582 aaPredicted RBP30.39■■■□□ 2.46
FANCA-228ENST00000567943 MBD4O95243 580 aa30.38■■■□□ 2.45
FANCA-228ENST00000567943 SH3D19Q5HYK7 790 aa30.38■■■□□ 2.45
FANCA-228ENST00000567943 TTC6Q86TZ1 520 aa30.38■■■□□ 2.45
FANCA-228ENST00000567943 PROCA1Q8NCQ7 364 aaPredicted RBP30.38■■■□□ 2.45
FANCA-228ENST00000567943 RWDD1Q9H446 243 aaPredicted RBP30.38■■■□□ 2.45
FANCA-228ENST00000567943 ECM2O94769 699 aaPredicted RBP30.37■■■□□ 2.45
FANCA-228ENST00000567943 SHMT1P34896 483 aa30.37■■■□□ 2.45
FANCA-228ENST00000567943 IRX6P78412 446 aaPredicted RBP30.37■■■□□ 2.45
FANCA-228ENST00000567943 GABPAQ06546 454 aa30.37■■■□□ 2.45
FANCA-228ENST00000567943 TTC41PQ6P2S7 1318 aa30.37■■■□□ 2.45
FANCA-228ENST00000567943 TRIM47Q96LD4 638 aa30.36■■■□□ 2.45
FANCA-228ENST00000567943 PUS7LQ9H0K6 701 aaKnown RBP30.36■■■□□ 2.45
FANCA-228ENST00000567943 AS3MTQ9HBK9 375 aa30.36■■■□□ 2.45
FANCA-228ENST00000567943 GINM1Q9NU53 330 aa30.36■■■□□ 2.45
FANCA-228ENST00000567943 MCM9Q9NXL9 1143 aa30.36■■■□□ 2.45
FANCA-228ENST00000567943 MKI67P46013 3256 aaKnown RBP30.35■■■□□ 2.45
FANCA-228ENST00000567943 GH2P01242 217 aa30.35■■■□□ 2.45
FANCA-228ENST00000567943 CYP2D6P10635 497 aa30.35■■■□□ 2.45
FANCA-228ENST00000567943 BACE1P56817 501 aa30.35■■■□□ 2.45
FANCA-228ENST00000567943 MTMR2Q13614 643 aa30.35■■■□□ 2.45
FANCA-228ENST00000567943 PTCH2Q9Y6C5 1203 aa30.35■■■□□ 2.45
FANCA-228ENST00000567943 ERC2O15083 957 aa30.34■■■□□ 2.45
FANCA-228ENST00000567943 POLR3DP05423 398 aaPredicted RBP30.34■■■□□ 2.45
FANCA-228ENST00000567943 MX1P20591 662 aa30.34■■■□□ 2.45
FANCA-228ENST00000567943 ZSCAN25Q6NSZ9 544 aa30.34■■■□□ 2.45
FANCA-228ENST00000567943 KBTBD3Q8NAB2 608 aa30.34■■■□□ 2.45
FANCA-228ENST00000567943 PI4K2BQ8TCG2 481 aa30.34■■■□□ 2.45
FANCA-228ENST00000567943 SALL3Q9BXA9 1300 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 SMIM22K7EJ46 135 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 IGHDP01880 384 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 PSMC4P43686 418 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 KIF22Q14807 665 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 ARHGEF6Q15052 776 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 ARMC5Q96C12 935 aa30.33■■■□□ 2.45
FANCA-228ENST00000567943 GLRX3O76003 335 aaKnown RBP30.32■■■□□ 2.44
FANCA-228ENST00000567943 MLLT1Q03111 559 aaPredicted RBP30.31■■■□□ 2.44
FANCA-228ENST00000567943 CERKLQ49MI3 558 aaPredicted RBP30.31■■■□□ 2.44
FANCA-228ENST00000567943 SMC5Q8IY18 1101 aa30.31■■■□□ 2.44
FANCA-228ENST00000567943 MYH8P13535 1937 aa30.31■■■□□ 2.44
FANCA-228ENST00000567943 DOCK3Q8IZD9 2030 aa30.3■■■□□ 2.44
FANCA-228ENST00000567943 KIAA0100Q14667 2235 aaKnown RBP30.3■■■□□ 2.44
FANCA-228ENST00000567943 GNRH1P01148 92 aa30.3■■■□□ 2.44
FANCA-228ENST00000567943 GUCY1A2P33402 732 aa30.3■■■□□ 2.44
FANCA-228ENST00000567943 B4GALNT3Q6L9W6 998 aa30.3■■■□□ 2.44
FANCA-228ENST00000567943 ATP8A2Q9NTI2 1148 aa30.3■■■□□ 2.44
FANCA-228ENST00000567943 RBBP6Q7Z6E9 1792 aaKnown RBP30.29■■■□□ 2.44
FANCA-228ENST00000567943 CYP2D7A0A087X1C5 515 aa30.29■■■□□ 2.44
FANCA-228ENST00000567943 USP17L10C9JJH3 530 aa30.29■■■□□ 2.44
FANCA-228ENST00000567943 OSBPP22059 807 aa30.29■■■□□ 2.44
FANCA-228ENST00000567943 SLC44A5Q8NCS7 719 aa30.29■■■□□ 2.44
FANCA-228ENST00000567943 SMCR8Q8TEV9 937 aaPredicted RBP30.29■■■□□ 2.44
FANCA-228ENST00000567943 OSBP2Q969R2 916 aa30.29■■■□□ 2.44
FANCA-228ENST00000567943 ASCC2Q9H1I8 757 aaPredicted RBP30.29■■■□□ 2.44
FANCA-228ENST00000567943 EMILIN3Q9NT22 766 aa30.29■■■□□ 2.44
FANCA-228ENST00000567943 C19orf81C9J6K1 198 aa30.28■■■□□ 2.44
FANCA-228ENST00000567943 ABCB5Q2M3G0 1257 aa30.28■■■□□ 2.44
FANCA-228ENST00000567943 DYNLL2Q96FJ2 89 aa30.28■■■□□ 2.44
FANCA-228ENST00000567943 LNPKQ9C0E8 428 aa30.28■■■□□ 2.44
FANCA-228ENST00000567943 SRRDQ9UH36 339 aa30.28■■■□□ 2.44
FANCA-228ENST00000567943 FMNL1O95466 1100 aaPredicted RBP30.27■■■□□ 2.44
FANCA-228ENST00000567943 ANKRD13CQ8N6S4 541 aa30.27■■■□□ 2.44
FANCA-228ENST00000567943 STRBPQ96SI9 672 aaKnown RBP30.27■■■□□ 2.44
FANCA-228ENST00000567943 PNMA3Q9UL41 463 aa30.27■■■□□ 2.44
FANCA-228ENST00000567943 SLC4A4Q9Y6R1 1079 aa30.27■■■□□ 2.44
FANCA-228ENST00000567943 RNF113AO15541 343 aaKnown RBP30.26■■■□□ 2.43
FANCA-228ENST00000567943 HOXA7P31268 230 aaPredicted RBP30.26■■■□□ 2.43
FANCA-228ENST00000567943 RAB3GAP1Q15042 981 aa30.26■■■□□ 2.43
FANCA-228ENST00000567943 C12orf60Q5U649 245 aa30.26■■■□□ 2.43
FANCA-228ENST00000567943 ACER1Q8TDN7 264 aa30.26■■■□□ 2.43
FANCA-228ENST00000567943 ZNF333Q96JL9 665 aa30.26■■■□□ 2.43
FANCA-228ENST00000567943 TMOD4Q9NZQ9 345 aa30.26■■■□□ 2.43
FANCA-228ENST00000567943 POTEFA5A3E0 1075 aa30.25■■■□□ 2.43
FANCA-228ENST00000567943 USP17L12C9JPN9 530 aa30.25■■■□□ 2.43
FANCA-228ENST00000567943 USP17L21D6R901 530 aa30.25■■■□□ 2.43
FANCA-228ENST00000567943 SLC9C1Q4G0N8 1177 aa30.25■■■□□ 2.43
FANCA-228ENST00000567943 STAP2Q9UGK3 403 aa30.25■■■□□ 2.43
FANCA-228ENST00000567943 PDE1AP54750 535 aa30.24■■■□□ 2.43
FANCA-228ENST00000567943 PRMT2P55345 433 aa30.24■■■□□ 2.43
FANCA-228ENST00000567943 PABPC4Q13310 644 aaKnown RBP eCLIP30.24■■■□□ 2.43
FANCA-228ENST00000567943 SH3TC2Q8TF17 1288 aa30.24■■■□□ 2.43
FANCA-228ENST00000567943 APPBP2Q92624 585 aa30.24■■■□□ 2.43
FANCA-228ENST00000567943 ZFYP08048 801 aaPredicted RBP30.23■■■□□ 2.43
FANCA-228ENST00000567943 FCGRTP55899 365 aa30.23■■■□□ 2.43
FANCA-228ENST00000567943 SEPT2Q15019 361 aa30.23■■■□□ 2.43
FANCA-228ENST00000567943 FAM110CQ1W6H9 321 aa30.23■■■□□ 2.43
FANCA-228ENST00000567943 POTEEQ6S8J3 1075 aa30.23■■■□□ 2.43
FANCA-228ENST00000567943 P2RX7Q99572 595 aaKnown RBP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms