RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 RFX5P48382 616 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 KCNQ4P56696 695 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 MTMR3Q13615 1198 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 UBAP2LQ14157 1087 aaKnown RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 FAM26DQ5JW98 314 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 MEX3CQ5U5Q3 659 aaKnown RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 INTS5Q6P9B9 1019 aaKnown RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 UBE3BQ7Z3V4 1068 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 ABHD17AQ96GS6 310 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 ISCA1Q9BUE6 129 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 LRRCC1Q9C099 1032 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 ZCCHC2Q9C0B9 1178 aaKnown RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 ANO2Q9NQ90 1003 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 BCS1LQ9Y276 419 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 NOP58Q9Y2X3 529 aaKnown RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 GJA3Q9Y6H8 435 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 TNRC6CQ9HCJ0 1690 aaKnown RBP7.06□□□□□ -1.28
SF3B3-210ENST00000567654 MAP3K15Q6ZN16 1313 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 A0A087WZG4 1122 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 LOC102724428A0A0B4J2F2 783 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 H7C1W4 665 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 WFS1O76024 890 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 SASH1O94885 1247 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 SDSP20132 328 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 ANP32AP39687 249 aaKnown RBP7.05□□□□□ -1.28
SF3B3-210ENST00000567654 PDE1AP54750 535 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 SIK1P57059 783 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 FOXO4P98177 505 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 RTN1Q16799 776 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 RABL6Q3YEC7 729 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-210ENST00000567654 EFHC2Q5JST6 749 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 C1orf216Q8TAB5 229 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 SLC16A10Q8TF71 515 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 HCN2Q9UL51 889 aa7.05□□□□□ -1.28
SF3B3-210ENST00000567654 CACNA1SQ13698 1873 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 UBN2Q6ZU65 1347 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 BNIP3LO60238 219 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 STARD3NLO95772 234 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 SERPINB4P48594 390 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 MFAP1P55081 439 aaKnown RBP7.04□□□□□ -1.28
SF3B3-210ENST00000567654 TCIRG1Q13488 830 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 RNFT1Q5M7Z0 435 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 SMIM5Q71RC9 77 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 SYNE4Q8N205 404 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 LINC00116Q8NCU8 138 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 NANOS1Q8WY41 292 aaKnown RBP7.04□□□□□ -1.28
SF3B3-210ENST00000567654 TBC1D32Q96NH3 1257 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 IPO9Q96P70 1041 aaKnown RBP7.04□□□□□ -1.28
SF3B3-210ENST00000567654 TEX13AQ9BXU3 409 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-210ENST00000567654 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 CWC25Q9NXE8 425 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-210ENST00000567654 DOCK2Q92608 1830 aa7.04□□□□□ -1.28
SF3B3-210ENST00000567654 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 ABL1P00519 1130 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 MX1P20591 662 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 GPTP24298 496 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 GMPRP36959 345 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 IL6STP40189 918 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 CRKLP46109 303 aaKnown RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 EIF5P55010 431 aaKnown RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 KRT76Q01546 638 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 PTPN12Q05209 780 aaKnown RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 ZNF211Q13398 564 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 GAS6Q14393 721 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 GRIN2CQ14957 1233 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 C16orf46Q6P387 395 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 TREML4Q6UXN2 200 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 KIF6Q6ZMV9 814 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 AMIGO3Q86WK7 504 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 NPAS3Q8IXF0 933 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 PI4K2BQ8TCG2 481 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 GTF3C2Q8WUA4 911 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 KIF1BPQ96EK5 621 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 SIL1Q9H173 461 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 STAP2Q9UGK3 403 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 USP20Q9Y2K6 914 aa7.03□□□□□ -1.28
SF3B3-210ENST00000567654 DNMT3AQ9Y6K1 912 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-210ENST00000567654 CHD4Q14839 1912 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 TNFRSF10BO14763 440 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-210ENST00000567654 CDC45O75419 566 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 MAP4K4O95819 1239 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-210ENST00000567654 VSIG8P0DPA2 414 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 LMBR1LQ6UX01 489 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 NLRP10Q86W26 655 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 CCDC191Q8NCU4 936 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 IRF7Q92985 503 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 EAF2Q96CJ1 260 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-210ENST00000567654 MYO19Q96H55 970 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 COL25A1Q9BXS0 654 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-210ENST00000567654 IL25Q9H293 177 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 COPRSQ9NQ92 184 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms