RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.69□□□□□ -0.38
LINC00564-201ENST00000567258 CHMP4BQ9H444 224 aaKnown RBP12.69□□□□□ -0.38
LINC00564-201ENST00000567258 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 ATAD5Q96QE3 1844 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
LINC00564-201ENST00000567258 MCAMP43121 646 aa12.68□□□□□ -0.38
LINC00564-201ENST00000567258 NOL9Q5SY16 702 aaKnown RBP12.68□□□□□ -0.38
LINC00564-201ENST00000567258 NAA16Q6N069 864 aaPredicted RBP12.68□□□□□ -0.38
LINC00564-201ENST00000567258 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
LINC00564-201ENST00000567258 NSUN4Q96CB9 384 aaKnown RBP12.68□□□□□ -0.38
LINC00564-201ENST00000567258 BTBD19C9JJ37 291 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 TLR2O60603 784 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 RLBP1P12271 317 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 ZFPM1Q8IX07 1006 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 DBNDD2Q9BQY9 259 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 KIAA1468Q9P260 1216 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.67□□□□□ -0.38
LINC00564-201ENST00000567258 CDK5RAP2Q96SN8 1893 aa12.67□□□□□ -0.38
LINC00564-201ENST00000567258 PTPRFP10586 1907 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 PDHXO00330 501 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 CXCL11O14625 94 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
LINC00564-201ENST00000567258 IGSF3O75054 1194 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 HMMRO75330 724 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 FASTKD5Q7L8L6 764 aaKnown RBP12.66□□□□□ -0.38
LINC00564-201ENST00000567258 ANKRD23Q86SG2 305 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 PANK1Q8TE04 598 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 ZFRQ96KR1 1074 aaKnown RBP12.66□□□□□ -0.38
LINC00564-201ENST00000567258 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00564-201ENST00000567258 DDX19BQ9UMR2 479 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
LINC00564-201ENST00000567258 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 MYH1P12882 1939 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 PDE4DIPQ5VU43 2346 aa12.66□□□□□ -0.38
LINC00564-201ENST00000567258 TNRC18O15417 2968 aaPredicted RBP12.66□□□□□ -0.38
LINC00564-201ENST00000567258 MGAMO43451 1857 aa12.65□□□□□ -0.38
LINC00564-201ENST00000567258 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
LINC00564-201ENST00000567258 GNRH1P01148 92 aa12.65□□□□□ -0.38
LINC00564-201ENST00000567258 CEP85Q6P2H3 762 aa12.65□□□□□ -0.38
LINC00564-201ENST00000567258 ZNF512BQ96KM6 892 aaPredicted RBP12.65□□□□□ -0.38
LINC00564-201ENST00000567258 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
LINC00564-201ENST00000567258 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
LINC00564-201ENST00000567258 KCNH4Q9UQ05 1017 aa12.65□□□□□ -0.38
LINC00564-201ENST00000567258 PHIPQ8WWQ0 1821 aa12.65□□□□□ -0.39
LINC00564-201ENST00000567258 PTPRAP18433 802 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 HOXD10P28358 340 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 RHBDL3P58872 404 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 Q6ZNB5 142 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
LINC00564-201ENST00000567258 DHX36Q9H2U1 1008 aaKnown RBP12.64□□□□□ -0.39
LINC00564-201ENST00000567258 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00564-201ENST00000567258 EXOC6BQ9Y2D4 811 aa12.64□□□□□ -0.39
LINC00564-201ENST00000567258 PHF20L1A8MW92 1017 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 ZAP70P43403 619 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 PRMT2P55345 433 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 LACTBP83111 547 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 AACSQ86V21 672 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 CRACR2BQ8N4Y2 399 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 BCL11AQ9H165 835 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 SEPT9Q9UHD8 586 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 HERC5Q9UII4 1024 aaKnown RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 RCAN3Q9UKA8 241 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 ATRNL1Q5VV63 1379 aa12.63□□□□□ -0.39
LINC00564-201ENST00000567258 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
LINC00564-201ENST00000567258 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
LINC00564-201ENST00000567258 TRIM75PA6NK02 468 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 APBB1O00213 710 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
LINC00564-201ENST00000567258 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
LINC00564-201ENST00000567258 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 KCNC4Q03721 635 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 ZNF384Q8TF68 577 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 EAF2Q96CJ1 260 aaPredicted RBP12.62□□□□□ -0.39
LINC00564-201ENST00000567258 AS3MTQ9HBK9 375 aa12.62□□□□□ -0.39
LINC00564-201ENST00000567258 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms