RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 TRIM34Q9BYJ4 488 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 ASCC2Q9H1I8 757 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-212ENST00000566121 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 ZBTB21Q9ULJ3 1066 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 CDK5RAP2Q96SN8 1893 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
CMTM3-212ENST00000566121 UBXN2AP68543 259 aa18.42■□□□□ 0.54
CMTM3-212ENST00000566121 PRKCZQ05513 592 aa18.42■□□□□ 0.54
CMTM3-212ENST00000566121 COA7Q96BR5 231 aa18.42■□□□□ 0.54
CMTM3-212ENST00000566121 TCRBV5S4A2TA0A5A2 114 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 PDE6AP16499 860 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 USP5P45974 858 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 GJA8P48165 433 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 JAG1P78504 1218 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 GABPAQ06546 454 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 UBE2Q1Q7Z7E8 422 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 CCDC84Q86UT8 332 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-212ENST00000566121 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
CMTM3-212ENST00000566121 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-212ENST00000566121 MGAMO43451 1857 aa18.4■□□□□ 0.54
CMTM3-212ENST00000566121 MAGEB6P1A0A0J9YX57 407 aa18.4■□□□□ 0.54
CMTM3-212ENST00000566121 TNPO2O14787 897 aaKnown RBP18.4■□□□□ 0.54
CMTM3-212ENST00000566121 FLT3LGP49771 235 aa18.4■□□□□ 0.54
CMTM3-212ENST00000566121 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
CMTM3-212ENST00000566121 HAUS7Q99871 368 aa18.4■□□□□ 0.54
CMTM3-212ENST00000566121 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
CMTM3-212ENST00000566121 GJD2Q9UKL4 321 aa18.4■□□□□ 0.54
CMTM3-212ENST00000566121 ATAD5Q96QE3 1844 aa18.39■□□□□ 0.54
CMTM3-212ENST00000566121 ADCY3O60266 1144 aa18.39■□□□□ 0.53
CMTM3-212ENST00000566121 MTMR2Q13614 643 aa18.39■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L2Q6R6M4 530 aa18.39■□□□□ 0.53
CMTM3-212ENST00000566121 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
CMTM3-212ENST00000566121 GABRQQ9UN88 632 aa18.39■□□□□ 0.53
CMTM3-212ENST00000566121 ZSWIM8A7E2V4 1837 aa18.39■□□□□ 0.53
CMTM3-212ENST00000566121 CCL5P13501 91 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 USP14P54578 494 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 MTFR1Q15390 333 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-212ENST00000566121 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 LRRCC1Q9C099 1032 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 ATP8A2Q9NTI2 1148 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
CMTM3-212ENST00000566121 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 GOLIM4O00461 696 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 GH2P01242 217 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 SHMT1P34896 483 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
CMTM3-212ENST00000566121 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.37■□□□□ 0.53
CMTM3-212ENST00000566121 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 SAP30BPQ9UHR5 308 aaKnown RBP18.37■□□□□ 0.53
CMTM3-212ENST00000566121 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 MYH1P12882 1939 aa18.37■□□□□ 0.53
CMTM3-212ENST00000566121 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
CMTM3-212ENST00000566121 ADD2P35612 726 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 PLCD1P51178 756 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 HERVK_113P62684 666 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 IRX3P78415 501 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-212ENST00000566121 GPRC5AQ8NFJ5 357 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 SHISA4Q96DD7 197 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-212ENST00000566121 PAK6Q9NQU5 681 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-212ENST00000566121 SWAP70Q9UH65 585 aa18.36■□□□□ 0.53
CMTM3-212ENST00000566121 GDF11O95390 407 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 SGPL1O95470 568 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 MAPK4P31152 587 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 ABCB5Q2M3G0 1257 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 ZSCAN25Q6NSZ9 544 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
CMTM3-212ENST00000566121 RNF208Q9H0X6 261 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 RBPJLQ9UBG7 517 aa18.35■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 C20orf194Q5TEA3 1177 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 CRISPLD2Q9H0B8 497 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 BIN2Q9UBW5 565 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-212ENST00000566121 RABGAP1Q9Y3P9 1069 aa18.34■□□□□ 0.53
CMTM3-212ENST00000566121 DDX60LQ5H9U9 1706 aaKnown RBP18.33■□□□□ 0.52
CMTM3-212ENST00000566121 INHAP05111 366 aa18.33■□□□□ 0.52
CMTM3-212ENST00000566121 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-212ENST00000566121 CATSPERGQ6ZRH7 1159 aa18.33■□□□□ 0.52
CMTM3-212ENST00000566121 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
CMTM3-212ENST00000566121 SOCS4Q8WXH5 440 aa18.33■□□□□ 0.52
CMTM3-212ENST00000566121 USP6NLQ92738 828 aa18.33■□□□□ 0.52
CMTM3-212ENST00000566121 DNAJC2Q99543 621 aaKnown RBP18.33■□□□□ 0.52
CMTM3-212ENST00000566121 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms