RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 CCL15-CCL14A0A0B4J2E2 113 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 PATL2C9JE40 543 aaKnown RBP10.26□□□□□ -0.77
UBR1-204ENST00000563239 CA12O43570 354 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 GDF11O95390 407 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
UBR1-204ENST00000563239 SDSP20132 328 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 LBX1P52954 281 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 NMIQ13287 307 aaPredicted RBP10.26□□□□□ -0.77
UBR1-204ENST00000563239 CCL15Q16663 113 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 SBK1Q52WX2 424 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 GIMAP6Q6P9H5 292 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 CENPQQ7L2Z9 268 aaPredicted RBP10.26□□□□□ -0.77
UBR1-204ENST00000563239 FAM43AQ8N2R8 423 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 CRACR2BQ8N4Y2 399 aaPredicted RBP10.26□□□□□ -0.77
UBR1-204ENST00000563239 SLC44A5Q8NCS7 719 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 RILPL2Q969X0 211 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 CFHR5Q9BXR6 569 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 PICK1Q9NRD5 415 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 HELLSQ9NRZ9 838 aa10.26□□□□□ -0.77
UBR1-204ENST00000563239 BAZ2AQ9UIF9 1905 aaKnown RBP10.26□□□□□ -0.77
UBR1-204ENST00000563239 A0A0G2JLL6 359 aaPredicted RBP10.25□□□□□ -0.77
UBR1-204ENST00000563239 BTBD19C9JJ37 291 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 CXCL11O14625 94 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 TBC1D8O95759 1140 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 CETPP11597 493 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 GNAT2P19087 354 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 GUCY1A2P33402 732 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 SNAPC2Q13487 334 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 VPS53Q5VIR6 699 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 PRRT2Q7Z6L0 340 aaPredicted RBP10.25□□□□□ -0.77
UBR1-204ENST00000563239 ZNF589Q86UQ0 364 aaPredicted RBP10.25□□□□□ -0.77
UBR1-204ENST00000563239 IFNL3Q8IZI9 196 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 ZBTB21Q9ULJ3 1066 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 ATAD5Q96QE3 1844 aa10.25□□□□□ -0.77
UBR1-204ENST00000563239 USP17L5A8MUK1 530 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 GH2P01242 217 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 CDK8P49336 464 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 SPP2Q13103 211 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 MCMDC2Q4G0Z9 681 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 C16orf86Q6ZW13 317 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 WDR18Q9BV38 432 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 IL25Q9H293 177 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 PRDM10Q9NQV6 1147 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 ROBO3Q96MS0 1386 aa10.24□□□□□ -0.77
UBR1-204ENST00000563239 TRIM75PA6NK02 468 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 ALDH1A1P00352 501 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 ASNSP08243 561 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 CRHR2Q13324 411 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 DGKZQ13574 1117 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 CERKLQ49MI3 558 aaPredicted RBP10.23□□□□□ -0.77
UBR1-204ENST00000563239 ANKRD23Q86SG2 305 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 SIAH1Q8IUQ4 282 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 ZNF280CQ8ND82 737 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 ARPP21Q9UBL0 812 aaPredicted RBP10.23□□□□□ -0.77
UBR1-204ENST00000563239 SWAP70Q9UH65 585 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 TACC3Q9Y6A5 838 aa10.23□□□□□ -0.77
UBR1-204ENST00000563239 MINDY4BA8MYZ0 360 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 GPR25O00155 361 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 APPP05067 770 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 NEFLP07196 543 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 AKR1B1P15121 316 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 TDO2P48775 406 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 ALX1Q15699 326 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 NOM1Q5C9Z4 860 aaKnown RBP10.22□□□□□ -0.77
UBR1-204ENST00000563239 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBR1-204ENST00000563239 TBC1D2Q9BYX2 928 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 ZCCHC17Q9NP64 241 aaKnown RBP10.22□□□□□ -0.77
UBR1-204ENST00000563239 PTPRFP10586 1907 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 ADGRA2Q96PE1 1338 aa10.22□□□□□ -0.77
UBR1-204ENST00000563239 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 PDHXO00330 501 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 FGAP02671 866 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 HSPD1P10809 573 aaKnown RBP10.21□□□□□ -0.77
UBR1-204ENST00000563239 RASA1P20936 1047 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 CHMLP26374 656 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 HMGCS2P54868 508 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 BACE1P56817 501 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 CAP1Q01518 475 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 SEPT2Q15019 361 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 TREML2Q5T2D2 321 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 ERICH6BQ5W0A0 696 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 OTUD7BQ6GQQ9 843 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
UBR1-204ENST00000563239 FASTKD5Q7L8L6 764 aaKnown RBP10.21□□□□□ -0.77
UBR1-204ENST00000563239 ACER1Q8TDN7 264 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.77
UBR1-204ENST00000563239 INCENPQ9NQS7 918 aa10.21□□□□□ -0.77
UBR1-204ENST00000563239 LOC285556D6RIA3 1793 aa10.21□□□□□ -0.78
UBR1-204ENST00000563239 HIP1O00291 1037 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms