RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 SOCS4Q8WXH5 440 aa11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 SAP30BPQ9UHR5 308 aaKnown RBP11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
AC055876.4-201ENST00000562515 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 ZKSCAN1P17029 563 aaPredicted RBP11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 USP5P45974 858 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 BACE1P56817 501 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 WDR78Q5VTH9 848 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 ZKSCAN2Q63HK3 967 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 DBNDD2Q9BQY9 259 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 C11orf49Q9H6J7 331 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 ZMYND8Q9ULU4 1186 aaPredicted RBP11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
AC055876.4-201ENST00000562515 C19orf81C9J6K1 198 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 SURF6O75683 361 aaKnown RBP11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 BCAR3O75815 825 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 HERVK_113P62684 666 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 ZYXQ15942 572 aaKnown RBP11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 GPRC5AQ8NFJ5 357 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 GTF3C2Q8WUA4 911 aaPredicted RBP11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 TRIB2Q92519 343 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 WDR18Q9BV38 432 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 PALD1Q9ULE6 856 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
AC055876.4-201ENST00000562515 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 SYN1P17600 705 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 CYP7A1P22680 504 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 MAPK4P31152 587 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 RGS2P41220 211 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 TRIM32Q13049 653 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 RRP1BQ14684 758 aaKnown RBP11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 GPR108Q9NPR9 543 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 GINM1Q9NU53 330 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 MORF4L1Q9UBU8 362 aa11.65□□□□□ -0.54
AC055876.4-201ENST00000562515 CYP2E1P05181 493 aaPredicted RBP11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 ZAP70P43403 619 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 ERVK-9P63128 1117 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 ERVK-24P63145 666 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 ADGRA1Q86SQ6 560 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 MIGA1Q8NAN2 632 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 APBA2Q99767 749 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 PRO3102Q9H379 93 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 DNAJC18Q9H819 358 aa11.64□□□□□ -0.55
AC055876.4-201ENST00000562515 PEX10O60683 326 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 GLRX3O76003 335 aaKnown RBP11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 GH2P01242 217 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 DYNLL1P63167 89 aaKnown RBP11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 CCNA1P78396 465 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 GPR142Q7Z601 462 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 MAGEB6Q8N7X4 407 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 SLC17A8Q8NDX2 589 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 PIH1D3Q9NQM4 214 aaKnown RBP11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
AC055876.4-201ENST00000562515 SOX1O00570 391 aaPredicted RBP11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 IGSF3O75054 1194 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 USP14P54578 494 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 PPP4CP60510 307 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 MAP3K12Q12852 859 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 POLA2Q14181 598 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 PLEKHH3Q7Z736 793 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 UBE2OQ9C0C9 1292 aaKnown RBP11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 CCDC8Q9H0W5 538 aaPredicted RBP11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 CABP5Q9NP86 173 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 SERPINB13Q9UIV8 391 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 DBNLQ9UJU6 430 aaKnown RBP11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
AC055876.4-201ENST00000562515 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms