RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 DPF2Q92785 391 aa13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 SAP30BPQ9UHR5 308 aaKnown RBP13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 SERPINB13Q9UIV8 391 aa13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
AC087878.1-201ENST00000560709 PRDM1O75626 825 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 ZSCAN22P10073 491 aaPredicted RBP13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 CDK8P49336 464 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 PLCD1P51178 756 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 TFAP4Q01664 338 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 RTN1Q16799 776 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 MICU3Q86XE3 530 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 ZNF654Q8IZM8 581 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 NEDD1Q8NHV4 660 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 STK36Q9NRP7 1315 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
AC087878.1-201ENST00000560709 LMNB1P20700 586 aa13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 RASA1P20936 1047 aa13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 ZNF280AP59817 542 aaPredicted RBP13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 CCT2P78371 535 aaKnown RBP13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 TRIM22Q8IYM9 498 aa13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 TRIM34Q9BYJ4 488 aa13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
AC087878.1-201ENST00000560709 F13A1P00488 732 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 IFNAR1P17181 557 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 KIF5BP33176 963 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 TNFAIP1Q13829 316 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 FAM83AQ86UY5 434 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 CTCFLQ8NI51 663 aaPredicted RBP13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 DYNLL2Q96FJ2 89 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 ZKSCAN3Q9BRR0 538 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 MYH1P12882 1939 aa13.8□□□□□ -0.2
AC087878.1-201ENST00000560709 H3BQV1 296 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 JAK2O60674 1132 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 CTDNEP1O95476 244 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 NOVP48745 357 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 TNNI2P48788 182 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 GNAQP50148 359 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 RASSF7Q02833 373 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 NFIAQ12857 509 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 METTL16Q86W50 562 aaKnown RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 FANCBQ8NB91 859 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 FAM151AQ8WW52 585 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 ZBED3Q96IU2 234 aaPredicted RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 PRMT6Q96LA8 375 aaPredicted RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 NCOA5Q9HCD5 579 aaKnown RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 FAM198AQ9UFP1 575 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 HERC5Q9UII4 1024 aaKnown RBP13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 MTMR6Q9Y217 621 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
AC087878.1-201ENST00000560709 SSRP1Q08945 709 aaKnown RBP13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 PKP1Q13835 747 aa13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 FAM47AQ5JRC9 791 aa13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 NKX2-3Q8TAU0 364 aa13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 LZTS2Q9BRK4 669 aa13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 MYOZ2Q9NPC6 264 aa13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
AC087878.1-201ENST00000560709 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 FMNL1O95466 1100 aaPredicted RBP13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 TOP1P11387 765 aaKnown RBP13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 AKAP17AQ02040 695 aaKnown RBP13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 TROAPQ12815 778 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 ARHGAP27Q6ZUM4 889 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 GPC2Q8N158 579 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 DDX11Q96FC9 970 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
AC087878.1-201ENST00000560709 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 DEXIO95424 95 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 XBP1P17861 261 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 CDC27P30260 824 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms